bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_3172_orf2 Length=129 Score E Sequences producing significant alignments: (Bits) Value 7298705 38.5 0.003 At5g53480 38.5 0.003 Hs19923142 37.0 0.009 7295663 29.6 1.3 YER110c 29.3 2.0 SPAC1B1.03c 28.1 4.6 Hs12957488 26.9 9.0 > 7298705 Length=884 Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query 4 IAKQIAAVTFKNSISAKDMTLDGAAAQAWRALPAPTKAEIKKQLLAALQTECTQVGNAVC 63 +A+ A + KN +++KD + W P+ + IK +LAAL TE T+ A Sbjct 58 VARMAAGLQLKNHLTSKDEKVSQQYQDRWHQFPSEIRELIKNNILAALGTENTRPSCAA- 116 Query 64 QALAKLGVIEL 74 Q +A + VIEL Sbjct 117 QCVAYVAVIEL 127 > At5g53480 Length=870 Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 0/88 (0%) Query 5 AKQIAAVTFKNSISAKDMTLDGAAAQAWRALPAPTKAEIKKQLLAALQTECTQVGNAVCQ 64 ++++A + KN++ AK+ Q W AL TK++I+ LL L V + Q Sbjct 55 SRKLAGLVLKNALDAKEQHRKYELVQRWLALDMSTKSQIRAFLLKTLSAPVPDVRSTASQ 114 Query 65 ALAKLGVIELRSLEFEDLLPALQDMVQQ 92 +AK+ IEL ++ +L+ +L + Q Sbjct 115 VIAKVAGIELPQKQWPELIVSLLSNIHQ 142 > Hs19923142 Length=876 Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Query 4 IAKQIAAVTFKNSISAKDMTLDGAAAQAWRALPAPTKAEIKKQLLAALQTECTQVGNAVC 63 +A+ A + KNS+++KD + Q W A+ A + E+K +L L TE + +A Sbjct 52 VARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSA-S 110 Query 64 QALAKLGVIELRSLEFEDLLPAL 86 Q +A + E+ ++ +L+P L Sbjct 111 QCVAGIACAEIPVNQWPELIPQL 133 > 7295663 Length=528 Score = 29.6 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Query 33 RALPAPTKAEIKKQLLAALQTECTQVGNAVCQAL-AKLGVIELRSLEFEDLLPALQDMVQ 91 R P PT I+ Q+ +A+Q+ C+++ N V L A +I L ++ + PA ++ Sbjct 262 RVFPLPTT--IRSQITSAIQSNCSKIKNLVFAVLIANNKLIALVRMKKYSIHPADLRLIF 319 Query 92 QAVSCQQPQKQQQ 104 V C + K + Sbjct 320 NLVECSESFKSSE 332 > YER110c Length=1113 Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query 29 AQAWRALPAPTKAEIKKQLL-AALQTECTQVGNAVCQALAKLGVIELRSLEFEDLLPAL 86 ++ W A+ T+A IK LL A V ++ + +A +G EL ++ DL+P L Sbjct 68 SKHWNAIDESTRASIKTSLLQTAFSEPKENVRHSNARVIASIGTEELDGNKWPDLVPNL 126 > SPAC1B1.03c Length=863 Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 4/100 (4%) Query 9 AAVTFKNSISAKDMTLDGAAAQAWRALPAPTKAEIKKQLLAALQTECTQVGNAVCQALAK 68 A + KN+I+A++ Q W++LP K ++K L L + Q G + Q +A Sbjct 57 AGLALKNAITAREEARKLEYQQLWQSLPVEIKQQVKSLALQTLGSSEHQAGQSAAQLVAA 116 Query 69 LGVIELRSLEFEDLLPALQDMVQQAVSCQQPQKQQQQKQQ 108 + EL + ++ DL+ L V + QP +Q Q Sbjct 117 IAAYELATNQWPDLMVTLVANVGEG----QPSALKQHSLQ 152 > Hs12957488 Length=3012 Score = 26.9 bits (58), Expect = 9.0, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 42/81 (51%), Gaps = 6/81 (7%) Query 23 TLDGAAAQAWRALPAPTKAEIKKQLLAALQTECTQVGNAVCQALAKLGVIELRSLEFEDL 82 T DG + +A+ P+ + KQL+ ++ E ++ ++ LG SL F +L Sbjct 947 TPDGTVSYDNKAIGTPSVGVLLKQLVPLMRLESIEITESLV-----LGFGRTNSLVFREL 1001 Query 83 LPALQDMVQQAVSCQQPQKQQ 103 + L ++++A+ ++P+ ++ Sbjct 1002 VEELHPLMKEALE-RRPENKK 1021 Lambda K H 0.318 0.127 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1209785478 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40