bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_3295_orf1
Length=52
Score E
Sequences producing significant alignments: (Bits) Value
CE05441 49.7 1e-06
At5g52640 47.8 4e-06
At5g56010 47.4 6e-06
At5g56000 47.4 6e-06
At5g56030 47.4 6e-06
7292327 47.4 6e-06
Hs22065017 46.6 1e-05
Hs13129150 46.6 1e-05
Hs22041160 45.8 2e-05
SPAC926.04c 45.1 3e-05
Hs20149594 43.9 7e-05
YMR186w 40.8 6e-04
YPL240c 40.8 7e-04
Hs18550811 37.0 0.009
Hs4507677 36.2 0.014
At4g24190 35.8 0.020
At3g07770 32.3 0.19
Hs20471111 30.4 0.74
7301648 30.0 1.1
CE06362 28.5 3.3
ECU02g1100 27.7 4.8
At2g04030 27.7 5.1
> CE05441
Length=702
Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/27 (85%), Positives = 24/27 (88%), Gaps = 0/27 (0%)
Query 26 ENKETFAFNADIQQLMSLIINTFYSNK 52
EN ETFAF A+I QLMSLIINTFYSNK
Sbjct 3 ENAETFAFQAEIAQLMSLIINTFYSNK 29
> At5g52640
Length=705
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/29 (72%), Positives = 25/29 (86%), Gaps = 0/29 (0%)
Query 24 KMENKETFAFNADIQQLMSLIINTFYSNK 52
+M + ETFAF A+I QL+SLIINTFYSNK
Sbjct 5 QMADAETFAFQAEINQLLSLIINTFYSNK 33
> At5g56010
Length=699
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 0/28 (0%)
Query 25 MENKETFAFNADIQQLMSLIINTFYSNK 52
M + ETFAF A+I QL+SLIINTFYSNK
Sbjct 1 MADAETFAFQAEINQLLSLIINTFYSNK 28
> At5g56000
Length=699
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 0/28 (0%)
Query 25 MENKETFAFNADIQQLMSLIINTFYSNK 52
M + ETFAF A+I QL+SLIINTFYSNK
Sbjct 1 MADAETFAFQAEINQLLSLIINTFYSNK 28
> At5g56030
Length=699
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 0/28 (0%)
Query 25 MENKETFAFNADIQQLMSLIINTFYSNK 52
M + ETFAF A+I QL+SLIINTFYSNK
Sbjct 1 MADAETFAFQAEINQLLSLIINTFYSNK 28
> 7292327
Length=717
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/27 (81%), Positives = 23/27 (85%), Gaps = 0/27 (0%)
Query 26 ENKETFAFNADIQQLMSLIINTFYSNK 52
E ETFAF A+I QLMSLIINTFYSNK
Sbjct 3 EEAETFAFQAEIAQLMSLIINTFYSNK 29
> Hs22065017
Length=343
Score = 46.6 bits (109), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/27 (81%), Positives = 23/27 (85%), Gaps = 0/27 (0%)
Query 26 ENKETFAFNADIQQLMSLIINTFYSNK 52
E ETFAF A+I QLMSLIINTFYSNK
Sbjct 15 EEVETFAFQAEIAQLMSLIINTFYSNK 41
> Hs13129150
Length=732
Score = 46.6 bits (109), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/27 (81%), Positives = 23/27 (85%), Gaps = 0/27 (0%)
Query 26 ENKETFAFNADIQQLMSLIINTFYSNK 52
E ETFAF A+I QLMSLIINTFYSNK
Sbjct 15 EEVETFAFQAEIAQLMSLIINTFYSNK 41
> Hs22041160
Length=343
Score = 45.8 bits (107), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/24 (87%), Positives = 22/24 (91%), Gaps = 0/24 (0%)
Query 29 ETFAFNADIQQLMSLIINTFYSNK 52
ETFAF A+I QLMSLIINTFYSNK
Sbjct 13 ETFAFQAEIAQLMSLIINTFYSNK 36
> SPAC926.04c
Length=704
Score = 45.1 bits (105), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/28 (75%), Positives = 22/28 (78%), Gaps = 0/28 (0%)
Query 25 MENKETFAFNADIQQLMSLIINTFYSNK 52
M N ETF F A+I QLMSLIINT YSNK
Sbjct 1 MSNTETFKFEAEISQLMSLIINTVYSNK 28
> Hs20149594
Length=724
Score = 43.9 bits (102), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/23 (86%), Positives = 21/23 (91%), Gaps = 0/23 (0%)
Query 30 TFAFNADIQQLMSLIINTFYSNK 52
TFAF A+I QLMSLIINTFYSNK
Sbjct 14 TFAFQAEIAQLMSLIINTFYSNK 36
> YMR186w
Length=705
Score = 40.8 bits (94), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/24 (79%), Positives = 20/24 (83%), Gaps = 0/24 (0%)
Query 29 ETFAFNADIQQLMSLIINTFYSNK 52
ETF F A+I QLMSLIINT YSNK
Sbjct 4 ETFEFQAEITQLMSLIINTVYSNK 27
> YPL240c
Length=709
Score = 40.8 bits (94), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/24 (79%), Positives = 20/24 (83%), Gaps = 0/24 (0%)
Query 29 ETFAFNADIQQLMSLIINTFYSNK 52
ETF F A+I QLMSLIINT YSNK
Sbjct 4 ETFEFQAEITQLMSLIINTVYSNK 27
> Hs18550811
Length=329
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%), Gaps = 0/27 (0%)
Query 26 ENKETFAFNADIQQLMSLIINTFYSNK 52
E ETFAF A++ Q M L INTFYSN+
Sbjct 10 EEVETFAFQAEVAQFMYLNINTFYSNQ 36
> Hs4507677
Length=803
Score = 36.2 bits (82), Expect = 0.014, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 0/27 (0%)
Query 26 ENKETFAFNADIQQLMSLIINTFYSNK 52
E E FAF A++ ++M LIIN+ Y NK
Sbjct 71 EKSEKFAFQAEVNRMMKLIINSLYKNK 97
> At4g24190
Length=823
Score = 35.8 bits (81), Expect = 0.020, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 0/26 (0%)
Query 27 NKETFAFNADIQQLMSLIINTFYSNK 52
N E F F A++ +LM +IIN+ YSNK
Sbjct 75 NAEKFEFQAEVSRLMDIIINSLYSNK 100
> At3g07770
Length=803
Score = 32.3 bits (72), Expect = 0.19, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 0/24 (0%)
Query 29 ETFAFNADIQQLMSLIINTFYSNK 52
E F + A++ +LM LI+N+ YSNK
Sbjct 95 EKFEYQAEVSRLMDLIVNSLYSNK 118
> Hs20471111
Length=217
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 0/27 (0%)
Query 26 ENKETFAFNADIQQLMSLIINTFYSNK 52
E E F A I + MSLIINTFY NK
Sbjct 6 EEVEICTFQALIAEPMSLIINTFYFNK 32
> 7301648
Length=787
Score = 30.0 bits (66), Expect = 1.1, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 0/27 (0%)
Query 26 ENKETFAFNADIQQLMSLIINTFYSNK 52
E + F F ++ ++M LIIN+ Y NK
Sbjct 70 EKAKKFTFQTEVNRMMKLIINSLYRNK 96
> CE06362
Length=760
Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 0/24 (0%)
Query 29 ETFAFNADIQQLMSLIINTFYSNK 52
E F A++ ++M LIIN+ Y NK
Sbjct 62 EKHEFQAEVNRMMKLIINSLYRNK 85
> ECU02g1100
Length=690
Score = 27.7 bits (60), Expect = 4.8, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 0/29 (0%)
Query 24 KMENKETFAFNADIQQLMSLIINTFYSNK 52
K ++ ET F D+ Q+M +I + YS+K
Sbjct 14 KDKHSETHGFEVDVNQMMDTMIKSVYSSK 42
> At2g04030
Length=780
Score = 27.7 bits (60), Expect = 5.1, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 18/24 (75%), Gaps = 0/24 (0%)
Query 29 ETFAFNADIQQLMSLIINTFYSNK 52
E F + A++ +L+ LI+++ YS+K
Sbjct 77 EKFEYQAEVSRLLDLIVHSLYSHK 100
Lambda K H
0.323 0.131 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1158678716
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40