bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_3301_orf1
Length=54
Score E
Sequences producing significant alignments: (Bits) Value
At2g27490 52.4 2e-07
CE23950 50.8 5e-07
7298862 50.4 8e-07
Hs19923601 47.4 7e-06
Hs22063771 47.0 9e-06
YDR196c 44.7 5e-05
HsM13376838_2 42.7 2e-04
Hs21489977_2 42.7 2e-04
SPCC14G10.01 40.4 9e-04
CE28145_2 37.4 0.006
ECU11g0300 32.0 0.32
ECU10g0250 27.7 5.8
Hs18582922 27.3 7.7
7302606 26.9 8.8
> At2g27490
Length=232
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%), Gaps = 0/51 (0%)
Query 4 VPGLTGGLGTGKSSVSGFLKSHGWRVVDADEISRGILRRGSPAFRQVVKAF 54
+ GLTGG+ +GKS+VS K+ G VVDAD ++R +L++GS +++VV AF
Sbjct 3 IVGLTGGIASGKSTVSNLFKASGIPVVDADVVARDVLKKGSGGWKRVVAAF 53
> CE23950
Length=237
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 37/52 (71%), Gaps = 0/52 (0%)
Query 3 LVPGLTGGLGTGKSSVSGFLKSHGWRVVDADEISRGILRRGSPAFRQVVKAF 54
LV GL+GG+ TGKS+VS ++HG ++DAD+++R ++ G+ + ++ K F
Sbjct 12 LVVGLSGGVATGKSTVSSVFRAHGVPIIDADQVARQVVVPGTSTYNRLRKEF 63
> 7298862
Length=236
Score = 50.4 bits (119), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 0/52 (0%)
Query 3 LVPGLTGGLGTGKSSVSGFLKSHGWRVVDADEISRGILRRGSPAFRQVVKAF 54
+ +TGG+ TGKS++S + G V+DAD+I+R I+ G P +RQ+ + F
Sbjct 2 FIVAVTGGIATGKSTISKVFERQGIPVIDADKIAREIVEPGQPCWRQIREVF 53
> Hs19923601
Length=231
Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 0/49 (0%)
Query 6 GLTGGLGTGKSSVSGFLKSHGWRVVDADEISRGILRRGSPAFRQVVKAF 54
GLTGG+ +GKSSV + G V+D D ++R +++ G PA R++V+ F
Sbjct 5 GLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVF 53
> Hs22063771
Length=134
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 0/49 (0%)
Query 6 GLTGGLGTGKSSVSGFLKSHGWRVVDADEISRGILRRGSPAFRQVVKAF 54
GLTGG+ +GKSSV + G V+D D ++R +++ G PA R++V+ F
Sbjct 5 GLTGGIASGKSSVIQVFQQLGCAVIDVDVMARHVVQPGYPAHRRIVEVF 53
> YDR196c
Length=241
Score = 44.7 bits (104), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query 3 LVPGLTGGLGTGKSSVSGFLK-SHGWRVVDADEISRGILRRGSPAFRQVVKAF 54
LV GLTGG+ GKS+VS L+ + +VDAD+I+R ++ G A+ Q+V F
Sbjct 2 LVVGLTGGIACGKSTVSRRLRDKYKLPIVDADKIARQVVEPGQNAYDQIVLYF 54
> HsM13376838_2
Length=225
Score = 42.7 bits (99), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query 2 CL-VPGLTGGLGTGKSSVSGFLKSHGWRVVDADEISRGILRRGSPAFRQVVKAF 54
CL V GLTG G+GKSS++ LK G V+D+D + G PA++ VV+AF
Sbjct 18 CLYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAF 71
> Hs21489977_2
Length=225
Score = 42.7 bits (99), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query 2 CL-VPGLTGGLGTGKSSVSGFLKSHGWRVVDADEISRGILRRGSPAFRQVVKAF 54
CL V GLTG G+GKSS++ LK G V+D+D + G PA++ VV+AF
Sbjct 18 CLYVIGLTGISGSGKSSIAQRLKGLGAFVIDSDHLGHRAYAPGGPAYQPVVEAF 71
> SPCC14G10.01
Length=236
Score = 40.4 bits (93), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query 3 LVPGLTGGLGTGKSSVS-GFLKSHGWRVVDADEISRGILRRGSPAFRQVVKAF 54
L+ GLTG + TGKS+VS F + + +++DAD ++R ++ +P ++ K F
Sbjct 2 LILGLTGSIATGKSTVSREFQEKYHIKIIDADVLARKVVEPNTPCLIKIQKEF 54
> CE28145_2
Length=263
Score = 37.4 bits (85), Expect = 0.006, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query 6 GLTGGLGTGKSSVSGFLK-SHGWRVVDADEISRGILRRGSPAFRQVVKAF 54
GL GG+ +GKS + +L+ +H + V+D D+++ RGS R++ + F
Sbjct 23 GLAGGIASGKSHIGKYLRETHNFDVIDCDKLAHTCYERGSSLNRKIGEHF 72
> ECU11g0300
Length=187
Score = 32.0 bits (71), Expect = 0.32, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 25/38 (65%), Gaps = 0/38 (0%)
Query 4 VPGLTGGLGTGKSSVSGFLKSHGWRVVDADEISRGILR 41
+ +TG GTGK+++ L++ G+ +++D + R +L+
Sbjct 3 IVAITGSTGTGKTALLNLLEAKGYATINSDSVVREMLK 40
> ECU10g0250
Length=1141
Score = 27.7 bits (60), Expect = 5.8, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 0/34 (0%)
Query 19 SGFLKSHGWRVVDADEISRGILRRGSPAFRQVVK 52
S F K H W ++ + +G++R+ +F Q VK
Sbjct 3 SAFTKEHSWSIISSFFEQKGLVRQQLDSFDQFVK 36
> Hs18582922
Length=195
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query 3 LVPGLTGGLGTGKSSVSGFLKSHGWRVVDAD-EISRGILRRGSPA 46
L+P L GG G + G L++ GW + DA ++ R +L P
Sbjct 129 LMPILQGGPEKGNKAHRGILRADGWLLADAQKQLVRVLLLAKDPC 173
> 7302606
Length=109
Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 0/39 (0%)
Query 3 LVPGLTGGLGTGKSSVSGFLKSHGWRVVDADEISRGILR 41
L G GG TG+S + F ++ GW+V E + +LR
Sbjct 71 LTGGPCGGKTTGQSRLCTFFENLGWKVFRVPETATVLLR 109
Lambda K H
0.323 0.141 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1200194442
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40