bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Emax_3380_orf1
Length=99
Score E
Sequences producing significant alignments: (Bits) Value
Hs7656952 38.9 0.002
At1g30070 38.9 0.002
7290732 37.0 0.009
Hs5174457 29.6 1.6
CE10732 28.9 2.7
ECU01g1060 28.1 3.8
Hs18558101 28.1 4.2
> Hs7656952
Length=228
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query 12 LRSDLEELESLLKVARRPSIIRMLTEQCQRPRDQIQ---------EAEKL--EKCAAQGR 60
L+ DLEE++ LL+ A R + LT + + +I+ +AE L EK AA
Sbjct 6 LQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVA 65
Query 61 PTAEVFNT-IDRFAWDQTPALVKVYVHLDGLNDL 93
P + I + WDQ+ VK+Y+ L G++ +
Sbjct 66 PITTGYTVKISNYGWDQSDKFVKIYITLTGVHQV 99
> At1g30070
Length=222
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 30/108 (27%)
Query 6 MENTLGLRSDLEELESLLKVARRPSIIRMLTEQCQRPRDQIQEAEKLEKCA--AQGRPTA 63
M +GL DLEEL L +A+RP ++ ++ + I EKL A + +P
Sbjct 1 MAEEVGL--DLEELRQLQNIAKRPRVLNLINSE-------ISNLEKLRDSAVSSNAKPKV 51
Query 64 EV-------------------FNTIDRFAWDQTPALVKVYVHLDGLND 92
V + T+ F+WDQ VK+Y+ L+G+++
Sbjct 52 PVTVPAPVSSSGKPVSSSALNYVTLGTFSWDQDNDKVKMYISLEGVDE 99
> 7290732
Length=230
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query 12 LRSDLEELESLLKVARRPSIIRMLTEQCQRPRDQIQEAEKLEKCAAQGRPTAE-----VF 66
L+SD+ EL + L+ A+ + +LT +I E K AA+ + T
Sbjct 6 LKSDVAELAAFLQQAKGARVKDVLTTAKAEAEREIVNLELKAKIAAERQATGSSEAKRYL 65
Query 67 NTIDRFAWDQTPALVKVYVHLDGL 90
+ + + WDQ+ VK+++ L+G+
Sbjct 66 HELTDYGWDQSAKFVKLFITLNGV 89
> Hs5174457
Length=642
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query 5 AMENTLGLRSDLEELESLLKVARRPSIIRMLTEQCQRPRD----QIQEAEKL-EKCAAQ 58
A+ +GL LE+L +++ ++R +R L E+ Q+ D +I+EAE+ EKCA++
Sbjct 475 ALNKKMGLEDTLEQLNAMITESKRS--VRTLKEEVQKLDDLYQQKIKEAEEEDEKCASE 531
> CE10732
Length=974
Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 0/41 (0%)
Query 2 SELAMENTLGLRSDLEELESLLKVARRPSIIRMLTEQCQRP 42
+EL + + +RS ++E +L + P+I E CQRP
Sbjct 61 NELHISRVVNMRSFVKEANNLSNSQKNPNIFEPKNEVCQRP 101
> ECU01g1060
Length=696
Score = 28.1 bits (61), Expect = 3.8, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query 19 LESLLKVARRPS-IIRMLTEQCQRPRDQIQE----AEKLEKCAAQGRPTAEVFNTIDRFA 73
LE+ + +R+ S + + E RP QI E A L + G T+++ T+DRF+
Sbjct 65 LETFRESSRQASDFLIAIAEPMSRPL-QIHEFQITAYSLYAAVSVGLTTSDIIETLDRFS 123
Query 74 WDQTPALVKVYV 85
+ P V+V++
Sbjct 124 KNFLPRSVRVFI 135
> Hs18558101
Length=355
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query 45 QIQEAEKLEKCAAQGRPTAEVFNTIDRFAWDQTPALVKVY 84
++QE + L+K + QG TAEV+ F+ Q P+ +Y
Sbjct 48 RVQEPKHLKKNSGQGESTAEVYKPNQVFS--QIPSTFPIY 85
Lambda K H
0.317 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1191270180
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40