bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_0049_orf1
Length=122
Score E
Sequences producing significant alignments: (Bits) Value
cpv:cgd4_1920 hypothetical protein ; K12603 CCR4-NOT transcrip... 76.6 2e-14
pfa:PFE0980c CCR4; K12603 CCR4-NOT transcription complex subun... 74.7 7e-14
tgo:TGME49_059560 endonuclease/exonuclease/phosphatase domain-... 70.9 9e-13
mmu:231464 Cnot6l, 4932442K20Rik, DKFZp434K098, MGC29037; CCR4... 42.4 3e-04
hsa:246175 CNOT6L, CCR4b; CCR4-NOT transcription complex, subu... 42.4 3e-04
ath:AT3G58560 endonuclease/exonuclease/phosphatase family prot... 42.4 4e-04
xla:432104 cnot6l-a, MGC81488, ccr4b; CCR4-NOT transcription c... 42.4 4e-04
dre:553665 cnot6l, MGC111987, zgc:111987; CCR4-NOT transcripti... 41.6 6e-04
ath:AT3G58580 hydrolase 41.6 6e-04
xla:495050 cnot6l-b, ccr4b; CCR4-NOT transcription complex, su... 41.6 6e-04
cel:ZC518.3 ccr-4; CCR (yeast CCR4/NOT complex component) homo... 39.7 0.002
hsa:57472 CNOT6, CCR4, KIAA1194; CCR4-NOT transcription comple... 39.3 0.003
dre:560386 zgc:171797; K12603 CCR4-NOT transcription complex s... 39.3 0.003
tgo:TGME49_101220 hypothetical protein 38.9 0.004
ath:AT5G11350 endonuclease/exonuclease/phosphatase family protein 38.5 0.005
dre:324048 cnot6, KIAA1194, wu:fa03c11, wu:fc17f01, zgc:65822;... 37.4 0.012
mmu:104625 Cnot6, A230103N10Rik, AA407540, AW456442, CCR4, MGC... 37.0 0.014
mmu:211948 Pde12, 2'-PDE, E430028B21Rik; phosphodiesterase 12 36.2
dre:692319 2'-pde; zgc:136374 35.8 0.030
pfa:PFA_0355w PFA0355w:exon:1; carbon catabolite repressor pro... 35.8 0.033
ath:AT1G31500 endonuclease/exonuclease/phosphatase family protein 35.8 0.038
sce:YAL021C CCR4, FUN27, NUT21; Ccr4p (EC:3.1.13.4); K12603 CC... 35.4 0.045
hsa:201626 PDE12, 2'-PDE; phosphodiesterase 12 35.4
ath:AT1G73875 endonuclease/exonuclease/phosphatase family protein 34.7 0.069
ath:AT3G18500 hypothetical protein 32.3 0.39
tpv:TP01_0498 hypothetical protein 32.3 0.39
ath:AT2G48110 REF4; REF4 (REDUCED EPIDERMAL FLUORESCENCE 4) 29.3 2.8
dre:494454 fgf5; fibroblast growth factor 5; K04358 fibroblast... 29.3 3.1
pfa:PFC0850c endonuclease/exonuclease/phosphatase family prote... 29.3 3.3
ath:AT1G31530 endonuclease/exonuclease/phosphatase family protein 28.9 4.1
dre:100002795 novel protein similar to vertebrate rabphilin 3A... 28.9 4.1
ath:AT2G37460 nodulin MtN21 family protein 28.5 4.7
tgo:TGME49_004410 endonuclease/exonuclease/phosphatase domain-... 28.5 5.1
cel:R17.2 hypothetical protein 28.5 5.4
hsa:23070 FTSJD2, FLJ22156, KIAA0082, MTr1, hMTr1; FtsJ methyl... 28.1 6.7
ath:AT1G16460 ATRDH2; ATRDH2 (ARABIDOPSIS THALIANA RHODANESE H... 28.1 7.8
mmu:60425 Doc2g, D830013O18Rik; double C2, gamma 27.7 8.4
bbo:BBOV_II004670 18.m06391; endonuclease/exonuclease/phosphat... 27.7 9.6
> cpv:cgd4_1920 hypothetical protein ; K12603 CCR4-NOT transcription
complex subunit 6
Length=782
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query 18 KMQHSLQLASAYALGRALLDVEE-NDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLE 76
++ HS++L SAY++ +A+++ N V LEP+FTNYTPN++GCLDY+F++ L
Sbjct 676 QLGHSMRLRSAYSMAKAMVEGHNPNMLVSSTESLEPVFTNYTPNYLGCLDYVFYTDERLR 735
Query 77 LVGILEPIFEQQLIREGSS 95
L G+LE + E+ LIRE ++
Sbjct 736 LGGVLELLDEEALIREAAA 754
> pfa:PFE0980c CCR4; K12603 CCR4-NOT transcription complex subunit
6
Length=2488
Score = 74.7 bits (182), Expect = 7e-14, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 16/116 (13%)
Query 1 HQSVNPQQHKEVLPLHWKMQHSLQLASAYALGRAL---LDVEENDGVEVYRQLEPIFTNY 57
H+ N ++ + L K+ H+L L SAYA+ + L L+ EE + +E+Y EP+FTNY
Sbjct 2367 HEDFNSDKYSLLTDL--KLGHNLNLKSAYAISKLLSQKLNPEEYNNLELY---EPLFTNY 2421
Query 58 TPNFVGCLDYIFFSPFNLELVGILEPIFEQQLIREGSSSSSATAKTYCLCMCFFPS 113
T NF+GCLDYIF++ NL ++ + E QLI+E A+ Y L C PS
Sbjct 2422 TSNFIGCLDYIFYNDENLNIISTVNVADENQLIQE--------AQMYQLSDCALPS 2469
> tgo:TGME49_059560 endonuclease/exonuclease/phosphatase domain-containing
protein (EC:3.1.11.2 3.1.13.4); K12603 CCR4-NOT
transcription complex subunit 6
Length=1347
Score = 70.9 bits (172), Expect = 9e-13, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 0/75 (0%)
Query 19 MQHSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLELV 78
+ HS+ L S YA+ +AL D + RQ EP FTNYT N+ GCLDY+FF L +
Sbjct 1243 LGHSIPLKSGYAVSKALKDGLDPHDFYALRQSEPEFTNYTGNYTGCLDYLFFCDTMLRVR 1302
Query 79 GILEPIFEQQLIREG 93
ILEPI +QL+RE
Sbjct 1303 EILEPIDSKQLLREA 1317
> mmu:231464 Cnot6l, 4932442K20Rik, DKFZp434K098, MGC29037; CCR4-NOT
transcription complex, subunit 6-like; K12603 CCR4-NOT
transcription complex subunit 6
Length=555
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 18/73 (24%)
Query 18 KMQHSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLEL 77
++ H QL SAY EN+ L P +TNYT +F G +DYIF+S ++ +
Sbjct 459 RITHGFQLKSAY----------ENN-------LMP-YTNYTFDFKGVIDYIFYSKTHMNV 500
Query 78 VGILEPIFEQQLI 90
+G+L P+ Q L+
Sbjct 501 LGVLGPLDPQWLV 513
> hsa:246175 CNOT6L, CCR4b; CCR4-NOT transcription complex, subunit
6-like; K12603 CCR4-NOT transcription complex subunit
6
Length=555
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 18/73 (24%)
Query 18 KMQHSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLEL 77
++ H QL SAY EN+ L P +TNYT +F G +DYIF+S ++ +
Sbjct 459 RITHGFQLKSAY----------ENN-------LMP-YTNYTFDFKGVIDYIFYSKTHMNV 500
Query 78 VGILEPIFEQQLI 90
+G+L P+ Q L+
Sbjct 501 LGVLGPLDPQWLV 513
> ath:AT3G58560 endonuclease/exonuclease/phosphatase family protein;
K12603 CCR4-NOT transcription complex subunit 6
Length=602
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query 12 VLPLHWKMQHSLQLASAYA----LGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDY 67
+L H K+ H L L SAY+ +G ++ ++ ++ EP+FTN T +F+G LDY
Sbjct 488 ILRPHSKLTHQLPLVSAYSQFAKMGGNVITEQQRRRLDPASS-EPLFTNCTRDFIGTLDY 546
Query 68 IFFSPFNLEL 77
IF++ L +
Sbjct 547 IFYTADTLTV 556
> xla:432104 cnot6l-a, MGC81488, ccr4b; CCR4-NOT transcription
complex, subunit 6-like; K12603 CCR4-NOT transcription complex
subunit 6
Length=550
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 18/73 (24%)
Query 18 KMQHSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLEL 77
++ H QL SAY EN+ L P +TNYT +F G +DYIF+S ++++
Sbjct 454 RITHGFQLRSAY----------ENN-------LMP-YTNYTFDFKGVIDYIFYSKTHMDV 495
Query 78 VGILEPIFEQQLI 90
+GIL P+ Q ++
Sbjct 496 LGILGPLDPQWMM 508
> dre:553665 cnot6l, MGC111987, zgc:111987; CCR4-NOT transcription
complex, subunit 6-like; K12603 CCR4-NOT transcription
complex subunit 6
Length=559
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 18/71 (25%)
Query 19 MQHSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLELV 78
+ HS QL SAY E N L P +TNYT +F G +DYIFFS ++ ++
Sbjct 455 ITHSFQLKSAY---------EGN--------LMP-YTNYTYDFKGVIDYIFFSKTHMSVL 496
Query 79 GILEPIFEQQL 89
G+L P+ Q L
Sbjct 497 GVLGPLETQWL 507
> ath:AT3G58580 hydrolase
Length=603
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 12/72 (16%)
Query 12 VLPLHWKMQHSLQLASAYA--LGRALLDVEENDGVEVYRQL------EPIFTNYTPNFVG 63
+L H K+ H L L SAY+ + + ++ + G+E +R+ EP+FTN T +F+G
Sbjct 491 ILRPHTKLTHQLPLVSAYSSFVRKGIMGL----GLEQHRRRIDLNTNEPLFTNCTRDFIG 546
Query 64 CLDYIFFSPFNL 75
DYIF++ L
Sbjct 547 THDYIFYTADTL 558
> xla:495050 cnot6l-b, ccr4b; CCR4-NOT transcription complex,
subunit 6-like; K12603 CCR4-NOT transcription complex subunit
6
Length=550
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 18/73 (24%)
Query 18 KMQHSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLEL 77
++ H QL SAY EN+ L P +TNYT +F G +DYIF+S ++++
Sbjct 454 RITHGFQLRSAY----------ENN-------LMP-YTNYTFDFKGVIDYIFYSKTHIDV 495
Query 78 VGILEPIFEQQLI 90
+G+L P+ Q ++
Sbjct 496 LGVLGPLDPQWMM 508
> cel:ZC518.3 ccr-4; CCR (yeast CCR4/NOT complex component) homolog
family member (ccr-4); K12603 CCR4-NOT transcription complex
subunit 6
Length=613
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query 54 FTNYTPNFVGCLDYIFFSPFNLELVGILEPIFEQQLIR 91
FTNYT +F G +DYIF +P +L +GIL P F+ Q ++
Sbjct 514 FTNYTLDFKGMIDYIFATPQSLARLGILGP-FDPQWVQ 550
> hsa:57472 CNOT6, CCR4, KIAA1194; CCR4-NOT transcription complex,
subunit 6; K12603 CCR4-NOT transcription complex subunit
6
Length=557
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 18/79 (22%)
Query 18 KMQHSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLEL 77
++ H +L SAY G L P +TNYT +F G +DYIF+S L
Sbjct 461 RITHGFKLQSAYESG-----------------LMP-YTNYTFDFKGIIDYIFYSKPQLNT 502
Query 78 VGILEPIFEQQLIREGSSS 96
+GIL P+ L+ S
Sbjct 503 LGILGPLDHHWLVENNISG 521
> dre:560386 zgc:171797; K12603 CCR4-NOT transcription complex
subunit 6
Length=558
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 18/78 (23%)
Query 18 KMQHSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLEL 77
++ H+ +L SAY G L P +TNYT +F G +DYIF+S L +
Sbjct 462 RITHAFKLKSAYENG-----------------LMP-YTNYTFDFRGVIDYIFYSRPQLNV 503
Query 78 VGILEPIFEQQLIREGSS 95
+G+L P+ L+ S
Sbjct 504 LGVLGPLDTNWLLENNIS 521
> tgo:TGME49_101220 hypothetical protein
Length=469
Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats.
Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 0/20 (0%)
Query 51 EPIFTNYTPNFVGCLDYIFF 70
EP FTNYT +F GCLDY+FF
Sbjct 408 EPRFTNYTRDFQGCLDYLFF 427
> ath:AT5G11350 endonuclease/exonuclease/phosphatase family protein
Length=754
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query 14 PLHWKMQHSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPF 73
P ++H+L+L S Y+ + + +G EP+ T+Y F+G +DYI+ S
Sbjct 654 PERTTVEHALELKSTYSEVEGQANTRDENG-------EPVVTSYHRCFMGTVDYIWRSE- 705
Query 74 NLELVGILEPIFEQQL 89
L+ V +L PI +Q +
Sbjct 706 GLQTVRVLAPIPKQAM 721
> dre:324048 cnot6, KIAA1194, wu:fa03c11, wu:fc17f01, zgc:65822;
CCR4-NOT transcription complex, subunit 6; K12603 CCR4-NOT
transcription complex subunit 6
Length=557
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 18/73 (24%)
Query 18 KMQHSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLEL 77
++ H +L SAY G L P +TNYT +F G +DYIF+S L +
Sbjct 461 RITHGFKLKSAYENG-----------------LMP-YTNYTFDFKGIIDYIFYSQPLLNV 502
Query 78 VGILEPIFEQQLI 90
+G+L P+ L+
Sbjct 503 LGVLGPLEHHWLL 515
> mmu:104625 Cnot6, A230103N10Rik, AA407540, AW456442, CCR4, MGC98472;
CCR4-NOT transcription complex, subunit 6; K12603 CCR4-NOT
transcription complex subunit 6
Length=552
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 18/79 (22%)
Query 18 KMQHSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLEL 77
++ H +L SAY G L P +TNYT +F G +DYIF+S L
Sbjct 456 RITHGFKLKSAYENG-----------------LMP-YTNYTFDFKGIIDYIFYSKPQLNT 497
Query 78 VGILEPIFEQQLIREGSSS 96
+ IL P+ L+ S
Sbjct 498 LAILGPLDHHWLVENNISG 516
> mmu:211948 Pde12, 2'-PDE, E430028B21Rik; phosphodiesterase 12
Length=608
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 0/31 (0%)
Query 51 EPIFTNYTPNFVGCLDYIFFSPFNLELVGIL 81
EP +TNY F GCLDYIF LE+ ++
Sbjct 545 EPAYTNYVGGFHGCLDYIFIDLNTLEVEQVI 575
> dre:692319 2'-pde; zgc:136374
Length=591
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 0/30 (0%)
Query 52 PIFTNYTPNFVGCLDYIFFSPFNLELVGIL 81
P FTN+ F GCLDYIF P L++ ++
Sbjct 525 PDFTNFVGGFQGCLDYIFVEPRTLQVEQVI 554
> pfa:PFA_0355w PFA0355w:exon:1; carbon catabolite repressor protein
4, putative
Length=322
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%), Gaps = 0/21 (0%)
Query 51 EPIFTNYTPNFVGCLDYIFFS 71
EP FTN TP+F GC+DYIF+
Sbjct 263 EPEFTNKTPSFEGCIDYIFYK 283
> ath:AT1G31500 endonuclease/exonuclease/phosphatase family protein
Length=417
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query 45 EVYRQLEPIFTNYTPNFVGCLDYIFFSPFN-LELVGILE 82
EV R EP FTN TP F LDYIF SP + ++ V IL+
Sbjct 346 EVTRG-EPKFTNCTPGFTNTLDYIFISPSDFIKPVSILQ 383
> sce:YAL021C CCR4, FUN27, NUT21; Ccr4p (EC:3.1.13.4); K12603
CCR4-NOT transcription complex subunit 6
Length=837
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 0/28 (0%)
Query 54 FTNYTPNFVGCLDYIFFSPFNLELVGIL 81
FTN+TP+F +DYI+FS L + G+L
Sbjct 768 FTNFTPSFTDVIDYIWFSTHALRVRGLL 795
> hsa:201626 PDE12, 2'-PDE; phosphodiesterase 12
Length=609
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 0/31 (0%)
Query 51 EPIFTNYTPNFVGCLDYIFFSPFNLELVGIL 81
EP +TNY F GCLDYIF LE+ ++
Sbjct 546 EPAYTNYVGGFHGCLDYIFIDLNALEVEQVI 576
> ath:AT1G73875 endonuclease/exonuclease/phosphatase family protein
Length=454
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query 19 MQHSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLELV 78
+QH L+L SAY+ + G EP+ T Y F+G +DYI+ + L V
Sbjct 363 VQHQLKLNSAYSGVPGTYRTRDQRG-------EPLATTYHSRFLGTVDYIWHTK-ELVPV 414
Query 79 GILEPIFEQQLIREGSSSSSATAKTYCLCMC 109
+LE + L R G S + C
Sbjct 415 RVLETLPADVLRRTGGLPSENWGSDHLAIAC 445
> ath:AT3G18500 hypothetical protein
Length=448
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query 21 HSLQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFS 71
H L+L S+YA + + ++ G EP+ T+Y F+G +DY+++S
Sbjct 360 HPLKLNSSYASVKGSANTRDSVG-------EPLATSYHSKFLGTVDYLWYS 403
> tpv:TP01_0498 hypothetical protein
Length=698
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query 23 LQLASAYALGRALLDVEENDGVEVYRQLEPIFTNYTPNFVGCLDYIFFSPFNLELVGILE 82
L+L+SAYA+G + EP FT + GC+DYI + P ++L I E
Sbjct 618 LKLSSAYAMGDSF-------------NSEPAFTAFHGWQRGCVDYICYDPSLVQLEAIYE 664
Query 83 PIFEQQLIREG 93
+ R G
Sbjct 665 MPHYSHVRRNG 675
> ath:AT2G48110 REF4; REF4 (REDUCED EPIDERMAL FLUORESCENCE 4)
Length=1275
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 0/25 (0%)
Query 4 VNPQQHKEVLPLHWKMQHSLQLASA 28
+ Q K V PLHW +Q L LASA
Sbjct 18 IRSAQEKNVDPLHWALQLRLTLASA 42
> dre:494454 fgf5; fibroblast growth factor 5; K04358 fibroblast
growth factor
Length=225
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 0/40 (0%)
Query 72 PFNLELVGILEPIFEQQLIREGSSSSSATAKTYCLCMCFF 111
P + +L G E QL+ EG S T + YC F
Sbjct 14 PRSAQLTGRERAYLEHQLVEEGRVSGRRTGRLYCRVGIGF 53
> pfa:PFC0850c endonuclease/exonuclease/phosphatase family protein,
putative
Length=906
Score = 29.3 bits (64), Expect = 3.3, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query 47 YRQLEPIFTNYTPNFVGCLDYIFFSPFNLELVGILEPI 84
Y + + FTN+ NF+ LDYIF S N+++ +L+ I
Sbjct 841 YTKQDIQFTNWNNNFIDVLDYIFLST-NIKVRKVLKGI 877
> ath:AT1G31530 endonuclease/exonuclease/phosphatase family protein
Length=283
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
Query 47 YRQLEPIFTNYTPNFVGCLDYIFFS 71
+ + EP FTN P F LDY+F++
Sbjct 217 FTKGEPRFTNNVPGFAETLDYMFYT 241
> dre:100002795 novel protein similar to vertebrate rabphilin
3A homolog (mouse) (RPH3A)
Length=429
Score = 28.9 bits (63), Expect = 4.1, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 0/33 (0%)
Query 77 LVGILEPIFEQQLIREGSSSSSATAKTYCLCMC 109
L L P++ + LI G +++ T KT LC+C
Sbjct 196 LKNTLNPVWNETLIYHGITAADMTTKTLRLCVC 228
> ath:AT2G37460 nodulin MtN21 family protein
Length=380
Score = 28.5 bits (62), Expect = 4.7, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 0/31 (0%)
Query 73 FNLELVGILEPIFEQQLIREGSSSSSATAKT 103
F + L+G+LEP+ +Q L G ++AT T
Sbjct 79 FKISLLGLLEPVIDQNLYYLGMKYTTATFAT 109
> tgo:TGME49_004410 endonuclease/exonuclease/phosphatase domain-containing
protein (EC:3.1.13.4)
Length=1002
Score = 28.5 bits (62), Expect = 5.1, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 0/32 (0%)
Query 51 EPIFTNYTPNFVGCLDYIFFSPFNLELVGILE 82
EP FT Y GC+DYIF+ +L++ I +
Sbjct 937 EPAFTAYHGWQKGCIDYIFYHSKSLDVARIYQ 968
> cel:R17.2 hypothetical protein
Length=628
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 5/23 (21%)
Query 52 PIFTNYTPN-----FVGCLDYIF 69
P +TNYT + FVGCLDYI+
Sbjct 564 PEYTNYTASSQKDGFVGCLDYIW 586
> hsa:23070 FTSJD2, FLJ22156, KIAA0082, MTr1, hMTr1; FtsJ methyltransferase
domain containing 2 (EC:2.1.1.57); K14589 cap-specific
mRNA (nucleoside-2'-O-)-methyltransferase 1 [EC:2.1.1.57]
Length=835
Score = 28.1 bits (61), Expect = 6.7, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 0/44 (0%)
Query 64 CLDYIFFSPFNLELVGILEPIFEQQLIREGSSSSSATAKTYCLC 107
C + F+PF++ LV +L FE+ + + +S A ++ Y +C
Sbjct 403 CKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVC 446
> ath:AT1G16460 ATRDH2; ATRDH2 (ARABIDOPSIS THALIANA RHODANESE
HOMOLOGUE 2); 3-mercaptopyruvate sulfurtransferase/ thiosulfate
sulfurtransferase (EC:2.8.1.1); K01011 thiosulfate/3-mercaptopyruvate
sulfurtransferase [EC:2.8.1.1 2.8.1.2]
Length=318
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 0/32 (0%)
Query 19 MQHSLQLASAYALGRALLDVEENDGVEVYRQL 50
++H L A+A G + L +E NDGV VY +
Sbjct 79 LRHMLPSEEAFAAGCSALGIENNDGVVVYDGM 110
> mmu:60425 Doc2g, D830013O18Rik; double C2, gamma
Length=387
Score = 27.7 bits (60), Expect = 8.4, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 0/31 (0%)
Query 79 GILEPIFEQQLIREGSSSSSATAKTYCLCMC 109
G EP++E+ L G + A KT LC+C
Sbjct 143 GTREPVWEETLTYHGFTCQDAGRKTLRLCVC 173
> bbo:BBOV_II004670 18.m06391; endonuclease/exonuclease/phosphatase
family protein
Length=597
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query 9 HKEVLPLHWKMQH--SLQLASAYALGR--ALLDVEENDGV-EVYRQLEPIFTNYTPNFVG 63
H+ +P Q+ S + Y+ G L+V G + Y E FTN+ F G
Sbjct 491 HERFIPSAQNKQYLDSRMNGTPYSFGEQSERLEVPNYQGYHDAYSGHELPFTNFVKTFSG 550
Query 64 CLDYIFFS 71
LDYIF S
Sbjct 551 TLDYIFHS 558
Lambda K H
0.321 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2008132680
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40