bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_0385_orf1
Length=110
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_120050 ribosomal protein L5, putative ; K02932 larg... 158 4e-39
bbo:BBOV_III010590 17.m07915; ribosomal L18p/L5e family protei... 148 3e-36
cpv:cgd8_440 60S ribosomal protein L5 ; K02932 large subunit r... 146 2e-35
tpv:TP02_0082 60S ribosomal protein L5e; K02932 large subunit ... 139 3e-33
pfa:PF14_0230 60S ribosomal protein L5, putative; K02932 large... 113 2e-25
ath:AT3G25520 ATL5; ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); 5... 113 2e-25
ath:AT5G39740 RPL5B; 60S ribosomal protein L5 (RPL5B); K02932 ... 113 2e-25
xla:379124 rpl5-b, MGC53393, rpl5; ribosomal protein L5; K0293... 110 1e-24
dre:415196 rpl5b, rpl5, wu:fj02g05, zgc:86854; ribosomal prote... 108 5e-24
xla:379064 rpl5-a, MGC52733; ribosomal protein L5; K02932 larg... 107 1e-23
cel:F54C9.5 rpl-5; Ribosomal Protein, Large subunit family mem... 107 1e-23
dre:326961 rpl5a, Rpl5, mg:cb01f08, rpl5l, zgc:56511, zgc:7717... 105 2e-23
mmu:100503670 Rpl5, MGC101934, MGC102309, MGC117998, MGC25420,... 104 8e-23
mmu:668936 Gm14217, OTTMUSG00000015979; predicted gene 14217 104 8e-23
hsa:6125 RPL5, DBA6, MGC117339; ribosomal protein L5; K02932 l... 103 1e-22
xla:100126642 hypothetical protein LOC100126642 95.5 3e-20
sce:YPL131W RPL5, LPI14, RPL1; Rpl5p; K02932 large subunit rib... 92.0 4e-19
tgo:TGME49_066830 sec7 domain-containing protein 29.3 3.0
hsa:6011 GRK1, GPRK1, RHOK, RK; G protein-coupled receptor kin... 28.1 7.8
bbo:BBOV_III002070 17.m07200; hypothetical protein; K10754 rep... 27.7 9.6
> tgo:TGME49_120050 ribosomal protein L5, putative ; K02932 large
subunit ribosomal protein L5e
Length=310
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 88/110 (80%), Gaps = 1/110 (0%)
Query 1 KQKGLADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGG 60
KQ G+++ F GVE GEE+HIEE ERRPFK +LDVGIV TTVGNRVFGAMKGA DGG
Sbjct 111 KQLGMSETFEGVE-ATGEEYHIEENFGERRPFKVLLDVGIVRTTVGNRVFGAMKGAADGG 169
Query 61 LHIPHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEEDP 110
LH+PH K+FPG++K E E SY+PE HR+RI GLHVA+YMR LKEEDP
Sbjct 170 LHVPHGIKKFPGYSKPEGEGEGSYDPEAHRARILGLHVADYMRQLKEEDP 219
> bbo:BBOV_III010590 17.m07915; ribosomal L18p/L5e family protein;
K02932 large subunit ribosomal protein L5e
Length=308
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
Query 2 QKGLADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGGL 61
Q L ++FVG E+ +G FHIEE +RRPFK +LDVGI T GN+VFGA+KGACDGGL
Sbjct 112 QLKLDNQFVGKEQADGTSFHIEEEDHDRRPFKALLDVGIKIVTTGNKVFGALKGACDGGL 171
Query 62 HIPHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEEDP 110
HIPHS KRFPGF+ G+D + +Y+ EVHR RI G+HVA YMR +KEEDP
Sbjct 172 HIPHSEKRFPGFSVGDD-KQTNYDAEVHRERIMGIHVANYMREMKEEDP 219
> cpv:cgd8_440 60S ribosomal protein L5 ; K02932 large subunit
ribosomal protein L5e
Length=321
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 85/110 (77%), Gaps = 0/110 (0%)
Query 1 KQKGLADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGG 60
KQ + F GV + G+++H+EE +E+RRPFKC+LDVG+ TT GNRVF AMKGA DGG
Sbjct 121 KQLNMDKIFTGVGEITGDDYHVEEEAEDRRPFKCILDVGLTRTTSGNRVFAAMKGATDGG 180
Query 61 LHIPHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEEDP 110
++IPHS RFPGFTKGE+GAEDS++ EV + RI G H++ YM ++E+DP
Sbjct 181 IYIPHSPNRFPGFTKGENGAEDSFDAEVLKDRILGKHISNYMSEMQEDDP 230
> tpv:TP02_0082 60S ribosomal protein L5e; K02932 large subunit
ribosomal protein L5e
Length=306
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query 5 LADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGGLHIP 64
L +FVG + +GE +H+EE ERRPFK +LDVGI + T GNRVFGA+KGACDGGLH+P
Sbjct 115 LDSQFVGKVEADGELYHVEEEDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVP 174
Query 65 HSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEEDP 110
HS KRFPG++ +D SY+ + HR RI+G HVA YM LKEEDP
Sbjct 175 HSEKRFPGYS-VDDENNGSYDAQAHRDRIFGTHVANYMEYLKEEDP 219
> pfa:PF14_0230 60S ribosomal protein L5, putative; K02932 large
subunit ribosomal protein L5e
Length=294
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 75/111 (67%), Gaps = 9/111 (8%)
Query 1 KQKGLADEFVGVEKPNGEEFHIEETSEE--RRPFKCVLDVGIVSTTVGNRVFGAMKGACD 58
K L +F+GVEK GE + E+ +E R+P K LDVGI TT GNRVF A+KGACD
Sbjct 111 KSLNLDTQFLGVEKVTGEIENNEDKEDEEGRKPIKAFLDVGITRTTTGNRVFAALKGACD 170
Query 59 GGLHIPHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEED 109
GGL+IPH N RFP G+++ +NPE R I G+HVAEYM+TL+EED
Sbjct 171 GGLNIPHGNNRFP-------GSKNEFNPEQLRKNILGIHVAEYMKTLQEED 214
> ath:AT3G25520 ATL5; ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5);
5S rRNA binding / structural constituent of ribosome; K02932
large subunit ribosomal protein L5e
Length=301
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 77/106 (72%), Gaps = 5/106 (4%)
Query 5 LADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGGLHIP 64
+ DE+ G + GE+F +E T + RRPF+ +LDVG++ TT GNRVFGA+KGA DGGL IP
Sbjct 115 MDDEYEGNVEATGEDFSVEPT-DSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIP 173
Query 65 HSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEEDP 110
HS+KRF GF K E+ D+ E+HR+ IYG HV+ YM+ L E++P
Sbjct 174 HSDKRFAGFHK-ENKQLDA---EIHRNYIYGGHVSNYMKLLGEDEP 215
> ath:AT5G39740 RPL5B; 60S ribosomal protein L5 (RPL5B); K02932
large subunit ribosomal protein L5e
Length=301
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 77/106 (72%), Gaps = 5/106 (4%)
Query 5 LADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGGLHIP 64
+ DE+ G + GE+F +E T + RRPF+ +LDVG++ TT GNRVFGA+KGA DGGL IP
Sbjct 115 MDDEYEGNVEATGEDFSVEPT-DSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIP 173
Query 65 HSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEEDP 110
HS+KRF GF K E+ D+ E+HR+ IYG HV+ YM+ L E++P
Sbjct 174 HSDKRFAGFHK-ENKQLDA---EIHRNYIYGGHVSNYMKLLGEDEP 215
> xla:379124 rpl5-b, MGC53393, rpl5; ribosomal protein L5; K02932
large subunit ribosomal protein L5e
Length=296
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query 4 GLADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGGLHI 63
GL + G + G+E+++E E F C LD G+ TT GN+VFGA+KGA DGGL I
Sbjct 114 GLDKVYEGQVEVTGDEYNVESVDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSI 173
Query 64 PHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEED 109
PHS KRFPG+ D +N EVHR I+GL++AEYMR L EED
Sbjct 174 PHSTKRFPGY----DSESKEFNAEVHRKHIFGLNIAEYMRLLIEED 215
> dre:415196 rpl5b, rpl5, wu:fj02g05, zgc:86854; ribosomal protein
L5b; K02932 large subunit ribosomal protein L5e
Length=296
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query 4 GLADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGGLHI 63
GL + G + G+EF++E + F C LD G+ TT GN+VFGA+KGA DGGL I
Sbjct 114 GLDKVYDGQVEITGDEFNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 173
Query 64 PHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEED 109
PHS KRFPG+ D +N EVHR I GL++AEYMR L EED
Sbjct 174 PHSTKRFPGY----DVESKEFNAEVHRKHILGLNIAEYMRLLMEED 215
> xla:379064 rpl5-a, MGC52733; ribosomal protein L5; K02932 large
subunit ribosomal protein L5e
Length=296
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query 4 GLADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGGLHI 63
GL + G + G+E+++E E F C LD G+ TT GN+VFGA+KGA DGGL I
Sbjct 114 GLDKVYEGQVEVTGDEYNVESIDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSI 173
Query 64 PHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEED 109
PHS KRFPG+ D +N EVHR I+ +VAEYMR L EED
Sbjct 174 PHSTKRFPGY----DSESKEFNAEVHRKHIFAQNVAEYMRLLMEED 215
> cel:F54C9.5 rpl-5; Ribosomal Protein, Large subunit family member
(rpl-5); K02932 large subunit ribosomal protein L5e
Length=293
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query 1 KQKGLADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGG 60
K GL + G E+ GE++++EE + R PFK VLD+G+ TT G+++F MKG DGG
Sbjct 111 KTIGLDSTYKGHEELTGEDYNVEEEGD-RAPFKAVLDIGLARTTTGSKIFAVMKGVADGG 169
Query 61 LHIPHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEED 109
+++PHS RF GF D YN E HR RI G HVA+YM LKEED
Sbjct 170 INVPHSESRFFGF----DQESKEYNAEAHRDRILGKHVADYMTYLKEED 214
> dre:326961 rpl5a, Rpl5, mg:cb01f08, rpl5l, zgc:56511, zgc:77176;
ribosomal protein L5a; K02932 large subunit ribosomal protein
L5e
Length=297
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query 4 GLADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGGLHI 63
GL + G + G+EF++E + F C LD G+ TT GN+VFGA+KGA DGGL I
Sbjct 114 GLDKVYEGQVEVTGDEFNVESIDGQPGAFSCYLDAGLTRTTTGNKVFGALKGAVDGGLSI 173
Query 64 PHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEED 109
PHS KRFPG+ D +N EVHR I GL+V+EYM L EED
Sbjct 174 PHSTKRFPGY----DSESKEFNAEVHRKHILGLNVSEYMSLLMEED 215
> mmu:100503670 Rpl5, MGC101934, MGC102309, MGC117998, MGC25420,
U21RNA; ribosomal protein L5; K02932 large subunit ribosomal
protein L5e
Length=297
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query 4 GLADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGGLHI 63
G+ + G + NG E+++E + F C LD G+ TT GN+VFGA+KGA DGGL I
Sbjct 114 GMDKIYEGQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 173
Query 64 PHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEED 109
PHS KRFPG+ D +N EVHR I G +VA+YMR L EED
Sbjct 174 PHSTKRFPGY----DSESKEFNAEVHRKHIMGQNVADYMRYLMEED 215
> mmu:668936 Gm14217, OTTMUSG00000015979; predicted gene 14217
Length=348
Score = 104 bits (259), Expect = 8e-23, Method: Composition-based stats.
Identities = 52/106 (49%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query 4 GLADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGGLHI 63
G+ + G + NG E+++E + F C LD G+ TT GN+VFGA+KGA DGGL I
Sbjct 165 GMDKIYEGQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 224
Query 64 PHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEED 109
PHS KRFPG+ D +N EVHR I G VA+YMR L EED
Sbjct 225 PHSTKRFPGY----DSESKEFNAEVHRKHIMGQDVADYMRYLMEED 266
> hsa:6125 RPL5, DBA6, MGC117339; ribosomal protein L5; K02932
large subunit ribosomal protein L5e
Length=297
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query 4 GLADEFVGVEKPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGGLHI 63
G+ + G + G+E+++E + F C LD G+ TT GN+VFGA+KGA DGGL I
Sbjct 114 GMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI 173
Query 64 PHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEED 109
PHS KRFPG+ D +N EVHR I G +VA+YMR L EED
Sbjct 174 PHSTKRFPGY----DSESKEFNAEVHRKHIMGQNVADYMRYLMEED 215
> xla:100126642 hypothetical protein LOC100126642
Length=302
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 68/111 (61%), Gaps = 11/111 (9%)
Query 4 GLADEFVGVEKP-----NGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACD 58
GLAD++ G + +G +H+E + R PF+C LDVG+V TT G +VF MKGA D
Sbjct 114 GLADQYEGNTEAAAPGEDGGLYHVEAEGDSR-PFRCFLDVGLVRTTTGAKVFAVMKGAVD 172
Query 59 GGLHIPHSNKRFPGFTKGEDGAEDSYNPEVHRSRIYGLHVAEYMRTLKEED 109
GGL IPH+ KRFPG+ K + D+ R + G HVAEYM L+EED
Sbjct 173 GGLDIPHNEKRFPGYDKESNDWVDTL-----REHVLGGHVAEYMTHLQEED 218
> sce:YPL131W RPL5, LPI14, RPL1; Rpl5p; K02932 large subunit ribosomal
protein L5e
Length=297
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Query 30 RPFKCVLDVGIVSTTVGNRVFGAMKGACDGGLHIPHSNKRFPGFTKGEDGAEDSYNPEVH 89
RPFK LD+G+ TT G RVFGA+KGA DGGL++PHS RFPG+ D + +PE+
Sbjct 140 RPFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGW----DFETEEIDPELL 195
Query 90 RSRIYGLHVAEYMRTLKEED 109
RS I+G HV++YM L ++D
Sbjct 196 RSYIFGGHVSQYMEELADDD 215
> tgo:TGME49_066830 sec7 domain-containing protein
Length=3892
Score = 29.3 bits (64), Expect = 3.0, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query 14 KPNGEEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMK---GACDGGLHIPHSNKR 69
+P H++ S +P KC+ D+ ++T + F + G CDGGL + + ++
Sbjct 306 RPEDSSQHVQAPSSAIQPEKCLGDLSSLATPASSESFEDLTNAAGMCDGGLRLAFTREQ 364
> hsa:6011 GRK1, GPRK1, RHOK, RK; G protein-coupled receptor kinase
1 (EC:2.7.11.14); K00909 rhodopsin kinase [EC:2.7.11.14]
Length=563
Score = 28.1 bits (61), Expect = 7.8, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 0/35 (0%)
Query 36 LDVGIVSTTVGNRVFGAMKGACDGGLHIPHSNKRF 70
+D G + T V N F A +G+ DG P +K++
Sbjct 1 MDFGSLETVVANSAFIAARGSFDGSSSQPSRDKKY 35
> bbo:BBOV_III002070 17.m07200; hypothetical protein; K10754 replication
factor C subunit 1
Length=944
Score = 27.7 bits (60), Expect = 9.6, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query 18 EEFHIEETSEERRPFKCVLDVGIVSTTVGNRVFGAMKGACDGGLHIPHSNKRFPGFTKGE 77
E +EE + + F + D+ I+S+ + V G+C L P RF +K +
Sbjct 729 EADRVEEFLKRTQSFSLLPDLAILSSILPAMVISTAGGSCRERLMFPQYLGRFSTTSKNK 788
Query 78 DGAEDSYNPEVHRS--RIYGLHVAEYMRTL 105
D HRS R Y L + Y+ L
Sbjct 789 RFLSDIGKHMGHRSLIRSYPLVIDGYLDLL 818
Lambda K H
0.315 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2067351240
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40