bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_0597_orf1
Length=121
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_027360 60S ribosomal protein L3, putative ; K02925 ... 226 1e-59
bbo:BBOV_I002850 19.m02168; ribosomal protein L3; K02925 large... 225 2e-59
tpv:TP01_0560 60S ribosomal protein L3; K02925 large subunit r... 214 4e-56
pfa:PF10_0272 60S ribosomal protein L3, putative; K02925 large... 210 1e-54
cpv:cgd5_1580 hypothetical protein 198 3e-51
ath:AT1G61580 RPL3B; RPL3B (R-PROTEIN L3 B); structural consti... 183 1e-46
ath:AT1G43170 ARP1; ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); st... 181 7e-46
xla:380033 rpl3, MGC53999; ribosomal protein L3; K02925 large ... 180 1e-45
dre:322571 rpl3, MGC110350, wu:fa99g02, wu:fb65e09, zgc:110350... 180 1e-45
mmu:27367 Rpl3, F2, J1, MGC103388; ribosomal protein L3; K0292... 178 4e-45
mmu:674810 60S ribosomal protein L3-like 177 6e-45
hsa:6122 RPL3, MGC104284, TARBP-B; ribosomal protein L3; K0292... 177 7e-45
xla:100037184 hypothetical protein LOC100037184 177 1e-44
xla:494722 rpl3l; ribosomal protein L3-like; K02925 large subu... 174 5e-44
mmu:433745 Gm12816, OTTMUSG00000008543; predicted gene 12816 174 8e-44
sce:YOR063W RPL3, MAK8, TCM1, YOR29-14; Rpl3p; K02925 large su... 173 1e-43
xla:447398 MGC84749 protein 172 2e-43
mmu:66211 Rpl3l, 1110057H16Rik; ribosomal protein L3-like; K02... 171 5e-43
hsa:6123 RPL3L; ribosomal protein L3-like; K02925 large subuni... 169 3e-42
cel:F13B10.2 rpl-3; Ribosomal Protein, Large subunit family me... 165 3e-41
hsa:653881 60S ribosomal protein L3-like 65.5 4e-11
xla:494992 mrpl3; mitochondrial ribosomal protein L3 34.3 0.11
hsa:11222 MRPL3, MRL3, RPML3; mitochondrial ribosomal protein L3 31.6 0.65
cpv:cgd4_2580 oxysterol binding protein 1A-like pleckstrin hom... 31.2 0.79
dre:560270 csrnp1a, si:dkey-24c2.8; cysteine-serine-rich nucle... 29.6 2.4
dre:100332857 retinitis pigmentosa RP1 protein-like 29.6 2.5
bbo:BBOV_IV000250 21.m02906; glucosamine--fructose-6-phosphate... 29.3 2.8
mmu:13710 Elf3, ESE-1, ESX, jen; E74-like factor 3; K09429 E74... 28.1 6.4
xla:398892 araf-a, MGC68526, a-raf, araf, araf1, pks2, rafa1; ... 28.1 6.6
dre:336283 mrpl3, fj61d01, wu:fj61d01, zgc:66423; mitochondria... 27.7 8.2
> tgo:TGME49_027360 60S ribosomal protein L3, putative ; K02925
large subunit ribosomal protein L3e
Length=389
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 103/120 (85%), Positives = 115/120 (95%), Gaps = 0/120 (0%)
Query 2 EMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGY 61
EM+DVIGVTKGHGVKGVVSR+GVTRLPRKTHRGLRK+ACIGAWHPARVQFQVPRHGQKGY
Sbjct 212 EMIDVIGVTKGHGVKGVVSRWGVTRLPRKTHRGLRKIACIGAWHPARVQFQVPRHGQKGY 271
Query 62 FHRTEMNKKVYRIGSGNDPRNGSTDADLTEKRITPMGGFPHYGEVRSDFIMVKGCIVGSK 121
FHRTEMNKKVYR+G+G DPRN +T++DLTEKRITPMGGFPHYG V +DF+++KGCIVG K
Sbjct 272 FHRTEMNKKVYRVGNGADPRNATTESDLTEKRITPMGGFPHYGTVNNDFLLLKGCIVGCK 331
> bbo:BBOV_I002850 19.m02168; ribosomal protein L3; K02925 large
subunit ribosomal protein L3e
Length=393
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 116/121 (95%), Gaps = 0/121 (0%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
+EM+DV+GVTKGHG+KGV+SRFGVTRLPRKTHRGLRKVACIG+WHPARVQFQVPR GQKG
Sbjct 210 NEMVDVLGVTKGHGMKGVISRFGVTRLPRKTHRGLRKVACIGSWHPARVQFQVPRSGQKG 269
Query 61 YFHRTEMNKKVYRIGSGNDPRNGSTDADLTEKRITPMGGFPHYGEVRSDFIMVKGCIVGS 120
YFHRTE NKK+YR+G G++PRN STDADLTEK+ITPMGGFPHYGEV+ DF+M+KGCIVG+
Sbjct 270 YFHRTERNKKIYRLGLGSNPRNASTDADLTEKQITPMGGFPHYGEVKDDFLMIKGCIVGT 329
Query 121 K 121
K
Sbjct 330 K 330
> tpv:TP01_0560 60S ribosomal protein L3; K02925 large subunit
ribosomal protein L3e
Length=384
Score = 214 bits (546), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 99/121 (81%), Positives = 111/121 (91%), Gaps = 0/121 (0%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
+EMLDV+GVTKGHGVKGVVSR+GVTRLPRKTHRGLRKVACIG+WHPARVQFQVPRHGQKG
Sbjct 210 NEMLDVLGVTKGHGVKGVVSRYGVTRLPRKTHRGLRKVACIGSWHPARVQFQVPRHGQKG 269
Query 61 YFHRTEMNKKVYRIGSGNDPRNGSTDADLTEKRITPMGGFPHYGEVRSDFIMVKGCIVGS 120
Y RTE NKK+YR+G G+ RNGSTD+DLTEK ITPMGGFPHYG VR DF+M+KGCI G+
Sbjct 270 YHKRTERNKKIYRLGLGSSARNGSTDSDLTEKTITPMGGFPHYGVVREDFLMLKGCIPGT 329
Query 121 K 121
+
Sbjct 330 R 330
> pfa:PF10_0272 60S ribosomal protein L3, putative; K02925 large
subunit ribosomal protein L3e
Length=386
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 94/121 (77%), Positives = 107/121 (88%), Gaps = 0/121 (0%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
+EM+DVI VTKGHG KGVVSR+GV RLPRKTHRGLRKVACIGAWHPARVQFQ+PRHGQKG
Sbjct 209 NEMIDVISVTKGHGTKGVVSRYGVKRLPRKTHRGLRKVACIGAWHPARVQFQIPRHGQKG 268
Query 61 YFHRTEMNKKVYRIGSGNDPRNGSTDADLTEKRITPMGGFPHYGEVRSDFIMVKGCIVGS 120
YFHRTE NKK+YRIG D + STDAD+TEK+ITPMGGFPHYG V DF+++KGC+ G+
Sbjct 269 YFHRTERNKKIYRIGLKTDKNSASTDADITEKKITPMGGFPHYGVVNEDFLLLKGCVAGT 328
Query 121 K 121
K
Sbjct 329 K 329
> cpv:cgd5_1580 hypothetical protein
Length=305
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 104/121 (85%), Gaps = 0/121 (0%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
+EM+D+IG++KG G KGV+SR+GVT+LPRKT RG+RKV+CIGAWHPARVQFQVPR GQKG
Sbjct 128 NEMIDIIGISKGKGYKGVISRWGVTKLPRKTRRGVRKVSCIGAWHPARVQFQVPRAGQKG 187
Query 61 YFHRTEMNKKVYRIGSGNDPRNGSTDADLTEKRITPMGGFPHYGEVRSDFIMVKGCIVGS 120
Y RTE NKK+YRIG G+DPRN ST ADLTEK ITPMGGFP YG V DF+M+KGC VG
Sbjct 188 YGQRTETNKKIYRIGRGDDPRNASTSADLTEKTITPMGGFPRYGVVNQDFLMLKGCTVGC 247
Query 121 K 121
K
Sbjct 248 K 248
> ath:AT1G61580 RPL3B; RPL3B (R-PROTEIN L3 B); structural constituent
of ribosome; K02925 large subunit ribosomal protein
L3e
Length=390
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/122 (70%), Positives = 100/122 (81%), Gaps = 1/122 (0%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
DEM+D+IGVTKG G +GVV+R+GVTRLPRKTHRGLRKVACIGAWHPARV + V R GQ G
Sbjct 215 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNG 274
Query 61 YFHRTEMNKKVYRIGS-GNDPRNGSTDADLTEKRITPMGGFPHYGEVRSDFIMVKGCIVG 119
Y HRTEMNKKVYR+G G + + T+ D TEK ITPMGGFPHYG V+ D++M+KGC VG
Sbjct 275 YHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVG 334
Query 120 SK 121
K
Sbjct 335 PK 336
> ath:AT1G43170 ARP1; ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1);
structural constituent of ribosome
Length=389
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 83/122 (68%), Positives = 99/122 (81%), Gaps = 1/122 (0%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
DEM+D+IGVTKG G +GVV+R+GVTRLPRKTHRGLRKVACIGAWHPARV + V R GQ G
Sbjct 215 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNG 274
Query 61 YFHRTEMNKKVYRIGS-GNDPRNGSTDADLTEKRITPMGGFPHYGEVRSDFIMVKGCIVG 119
Y HRTE+NKK+YR+G G + T+ D TEK +TPMGGFPHYG V+ D++M+KGC VG
Sbjct 275 YHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVG 334
Query 120 SK 121
K
Sbjct 335 PK 336
> xla:380033 rpl3, MGC53999; ribosomal protein L3; K02925 large
subunit ribosomal protein L3e
Length=403
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 101/128 (78%), Gaps = 7/128 (5%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
DEM+DVIGVTKG G KGV SR+ +LPRKTHRGLRKVACIGAWHPARV F V R GQKG
Sbjct 214 DEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKG 273
Query 61 YFHRTEMNKKVYRIGSGNDPR-------NGSTDADLTEKRITPMGGFPHYGEVRSDFIMV 113
Y HRTE+NKK+Y+IG G + N STD DL++K I P+GGF HYGEV++DFIM+
Sbjct 274 YHHRTEINKKIYKIGQGYHSKDGKLVKNNASTDYDLSDKSINPLGGFVHYGEVKNDFIML 333
Query 114 KGCIVGSK 121
KGC++G+K
Sbjct 334 KGCVIGTK 341
> dre:322571 rpl3, MGC110350, wu:fa99g02, wu:fb65e09, zgc:110350;
ribosomal protein L3; K02925 large subunit ribosomal protein
L3e
Length=403
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 100/128 (78%), Gaps = 7/128 (5%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
DEM+DVIGVTKGHG KGV SR+ +LPRKTHRGLRKVACIGAWHPARV F V R GQKG
Sbjct 214 DEMIDVIGVTKGHGCKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKG 273
Query 61 YFHRTEMNKKVYRIGSGNDPR-------NGSTDADLTEKRITPMGGFPHYGEVRSDFIMV 113
Y HRTE+NKK+Y+IG G + N STD DL+ K I P+GGF HYGEV +DF+M+
Sbjct 274 YHHRTEINKKIYKIGVGYHNKDGKLVKNNASTDYDLSNKSINPLGGFVHYGEVTNDFLML 333
Query 114 KGCIVGSK 121
KGC+VG+K
Sbjct 334 KGCVVGTK 341
> mmu:27367 Rpl3, F2, J1, MGC103388; ribosomal protein L3; K02925
large subunit ribosomal protein L3e
Length=403
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 100/128 (78%), Gaps = 7/128 (5%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
DEM+DVIGVTKG G KGV SR+ +LPRKTHRGLRKVACIGAWHPARV F V R GQKG
Sbjct 214 DEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKG 273
Query 61 YFHRTEMNKKVYRIGSGNDPR-------NGSTDADLTEKRITPMGGFPHYGEVRSDFIMV 113
Y HRTE+NKK+Y+IG G + N STD DL++K I P+GGF HYGEV +DFIM+
Sbjct 274 YHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIML 333
Query 114 KGCIVGSK 121
KGC+VG+K
Sbjct 334 KGCVVGTK 341
> mmu:674810 60S ribosomal protein L3-like
Length=385
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 100/128 (78%), Gaps = 7/128 (5%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
DEM+DVIGVTKG G KGV SR+ +LPRKTHRGLRKVACIGAWHPARV F V R GQKG
Sbjct 196 DEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKG 255
Query 61 YFHRTEMNKKVYRIGSGNDPR-------NGSTDADLTEKRITPMGGFPHYGEVRSDFIMV 113
Y HRTE+NKK+Y+IG G + N STD DL++K I P+GGF HYGEV +DFIM+
Sbjct 256 YHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIML 315
Query 114 KGCIVGSK 121
KGC+VG+K
Sbjct 316 KGCVVGTK 323
> hsa:6122 RPL3, MGC104284, TARBP-B; ribosomal protein L3; K02925
large subunit ribosomal protein L3e
Length=403
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 100/128 (78%), Gaps = 7/128 (5%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
DEM+DVIGVTKG G KGV SR+ +LPRKTHRGLRKVACIGAWHPARV F V R GQKG
Sbjct 214 DEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKG 273
Query 61 YFHRTEMNKKVYRIGSGNDPR-------NGSTDADLTEKRITPMGGFPHYGEVRSDFIMV 113
Y HRTE+NKK+Y+IG G + N STD DL++K I P+GGF HYGEV +DF+M+
Sbjct 274 YHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVML 333
Query 114 KGCIVGSK 121
KGC+VG+K
Sbjct 334 KGCVVGTK 341
> xla:100037184 hypothetical protein LOC100037184
Length=405
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 97/128 (75%), Gaps = 7/128 (5%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
+E +D+I VTKG G +GV R+GV +L RKTHRGLRKVACIGAWHPARV F VPR GQ G
Sbjct 219 NENVDIIAVTKGKGFEGVTFRWGVKKLQRKTHRGLRKVACIGAWHPARVGFTVPRAGQNG 278
Query 61 YFHRTEMNKKVYRIGSGNDPR-------NGSTDADLTEKRITPMGGFPHYGEVRSDFIMV 113
Y HRTE+NKK+YRIG G + N STD DLTEK ITPMGGFPHYGEV +DFIM+
Sbjct 279 YHHRTELNKKIYRIGDGIHTKDGKVVKNNASTDYDLTEKSITPMGGFPHYGEVNNDFIMI 338
Query 114 KGCIVGSK 121
KGC G K
Sbjct 339 KGCCAGVK 346
> xla:494722 rpl3l; ribosomal protein L3-like; K02925 large subunit
ribosomal protein L3e
Length=407
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 101/128 (78%), Gaps = 7/128 (5%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
DEM+DVIGVTKG GV+GV SR+ +LPRKTH+GLRKVACIGAWHPARV + + R GQKG
Sbjct 214 DEMIDVIGVTKGKGVRGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVAYTIARAGQKG 273
Query 61 YFHRTEMNKKVYRIGSGND-------PRNGSTDADLTEKRITPMGGFPHYGEVRSDFIMV 113
Y HRTE+NKK+YRIG G N +T D+T+K ITP+GGFPHYG+V +D++M+
Sbjct 274 YHHRTEINKKIYRIGKGIHLEDGKVVKNNAATQYDITDKSITPLGGFPHYGQVNNDYVML 333
Query 114 KGCIVGSK 121
KGC++G+K
Sbjct 334 KGCVMGTK 341
> mmu:433745 Gm12816, OTTMUSG00000008543; predicted gene 12816
Length=403
Score = 174 bits (440), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 100/128 (78%), Gaps = 7/128 (5%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
DEM+DVIGVTKG G KGV SR+ +LPRKTHRGLRKVACIGAWHPARV F V R GQKG
Sbjct 214 DEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKG 273
Query 61 YFHRTEMNKKVYRIGSGNDPR-------NGSTDADLTEKRITPMGGFPHYGEVRSDFIMV 113
Y +RTE+NKK+Y+I G+ + N STD DL++K I P+GGF HYGEV +DFIM+
Sbjct 274 YHYRTEINKKIYKICQGHLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIML 333
Query 114 KGCIVGSK 121
KGC+VG+K
Sbjct 334 KGCVVGAK 341
> sce:YOR063W RPL3, MAK8, TCM1, YOR29-14; Rpl3p; K02925 large
subunit ribosomal protein L3e
Length=387
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 78/121 (64%), Positives = 96/121 (79%), Gaps = 0/121 (0%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
+EM+D I VTKGHG +GV R+G +LPRKTHRGLRKVACIGAWHPA V + V R GQ+G
Sbjct 212 NEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRG 271
Query 61 YFHRTEMNKKVYRIGSGNDPRNGSTDADLTEKRITPMGGFPHYGEVRSDFIMVKGCIVGS 120
Y RT +N K+YR+G G+D NG+T D T+K ITPMGGF HYGE+++DFIMVKGCI G+
Sbjct 272 YHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGN 331
Query 121 K 121
+
Sbjct 332 R 332
> xla:447398 MGC84749 protein
Length=420
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/145 (59%), Positives = 100/145 (68%), Gaps = 24/145 (16%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
DEM+DVIGVTKG G KGV SR+ +LPRKTH+GLRKVACIG+WHPARV V R GQKG
Sbjct 214 DEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGSWHPARVGSTVARAGQKG 273
Query 61 YFHRTEMNKKVYRIGSGNDPR------------------------NGSTDADLTEKRITP 96
YFHRTE+NKK+YRIG G + N ST+ DLT K ITP
Sbjct 274 YFHRTELNKKIYRIGLGLQAQLEVAKSEAAKEDNKDKAALIKPKGNASTEFDLTAKNITP 333
Query 97 MGGFPHYGEVRSDFIMVKGCIVGSK 121
MGGFPHYGEVR+D++M+KGC +G K
Sbjct 334 MGGFPHYGEVRNDYVMIKGCCMGPK 358
> mmu:66211 Rpl3l, 1110057H16Rik; ribosomal protein L3-like; K02925
large subunit ribosomal protein L3e
Length=407
Score = 171 bits (433), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 99/128 (77%), Gaps = 7/128 (5%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
E++DVI VTKG GVKGV SR+ +LPRKTH+GLRKVACIGAWHPARV + R GQKG
Sbjct 214 SEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKG 273
Query 61 YFHRTEMNKKVYRIGSG---NDPR----NGSTDADLTEKRITPMGGFPHYGEVRSDFIMV 113
Y HRTE+NKK+YRIG G D + N ST D+T+K ITP+GGFPHYGEV +DFIM+
Sbjct 274 YHHRTELNKKIYRIGRGLHMEDGKMVRNNASTSYDVTDKSITPLGGFPHYGEVNNDFIML 333
Query 114 KGCIVGSK 121
KGCI G+K
Sbjct 334 KGCIAGTK 341
> hsa:6123 RPL3L; ribosomal protein L3-like; K02925 large subunit
ribosomal protein L3e
Length=407
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 96/128 (75%), Gaps = 7/128 (5%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
E++DVI VTKG GVKGV SR+ +LPRKTH+GLRKVACIGAWHPARV + R GQKG
Sbjct 214 SEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKG 273
Query 61 YFHRTEMNKKVYRIGSGND-------PRNGSTDADLTEKRITPMGGFPHYGEVRSDFIMV 113
Y HRTE+NKK++RIG G N ST D+T K ITP+GGFPHYGEV +DF+M+
Sbjct 274 YHHRTELNKKIFRIGRGPHMEDGKLVKNNASTSYDVTAKSITPLGGFPHYGEVNNDFVML 333
Query 114 KGCIVGSK 121
KGCI G+K
Sbjct 334 KGCIAGTK 341
> cel:F13B10.2 rpl-3; Ribosomal Protein, Large subunit family
member (rpl-3); K02925 large subunit ribosomal protein L3e
Length=401
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 95/125 (76%), Gaps = 4/125 (3%)
Query 1 DEMLDVIGVTKGHGVKGVVSRFGVTRLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKG 60
DEM+D IGVT+GHG KGV SR+ +LPRKTH+GLRKVACIGAWHP+RV F V R GQKG
Sbjct 214 DEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKG 273
Query 61 YFHRTEMNKKVYRIG----SGNDPRNGSTDADLTEKRITPMGGFPHYGEVRSDFIMVKGC 116
+ HRT +N K+YRIG + NGST+ DLT+K ITPMGGFP YG V D+IM++G
Sbjct 274 FHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGA 333
Query 117 IVGSK 121
++G K
Sbjct 334 VLGPK 338
> hsa:653881 60S ribosomal protein L3-like
Length=102
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 34/40 (85%), Gaps = 0/40 (0%)
Query 82 NGSTDADLTEKRITPMGGFPHYGEVRSDFIMVKGCIVGSK 121
N STD DL++K I P+GGF HYGEV +DF+M+KGC+VG+K
Sbjct 1 NASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTK 40
> xla:494992 mrpl3; mitochondrial ribosomal protein L3
Length=341
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query 2 EMLDVIGVTKGHGVKGVVSRFGVTRLP-----RKTHRGLRKVACIGAWHPARVQFQVPRH 56
+ +DV T G G +GV+ R+G P KTHR + I + PARV
Sbjct 197 QFVDVTAKTIGKGFQGVMKRWGYKGQPASHGQTKTHR---RPGAISSGDPARVFPGTKMP 253
Query 57 GQKGYFHRTEMNKKVYRIGSGND 79
G+ G +RT KV+R+ + ++
Sbjct 254 GRMGNIYRTSYALKVWRVNTKHN 276
> hsa:11222 MRPL3, MRL3, RPML3; mitochondrial ribosomal protein
L3
Length=348
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query 2 EMLDVIGVTKGHGVKGVVSRFGVTRLP-----RKTHRGLRKVAC--IGAWHPARVQFQVP 54
+ +DV T G G +GV+ R+G P KTHR VA IG RV
Sbjct 202 QYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVATGDIG-----RVWPGTK 256
Query 55 RHGQKGYFHRTEMNKKVYRIGS 76
G+ G +RTE KV+RI +
Sbjct 257 MPGKMGNIYRTEYGLKVWRINT 278
> cpv:cgd4_2580 oxysterol binding protein 1A-like pleckstrin homology
(PH) domain containing protein
Length=814
Score = 31.2 bits (69), Expect = 0.79, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query 31 THRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGNDP 80
+HRG R +A HP F V H T +N K+ +IG N+P
Sbjct 459 SHRGFRFIAEQVGHHPPTTAFYVEH-------HPTNINDKIPKIGHTNNP 501
> dre:560270 csrnp1a, si:dkey-24c2.8; cysteine-serine-rich nuclear
protein 1a
Length=514
Score = 29.6 bits (65), Expect = 2.4, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query 6 VIGVTKGHGVKGVVSRFG-VTRLPRKTHRGLRKVACIGA-------WHPARVQFQVPRHG 57
++ TKG KG V RFG VT + +G V G WH AR QF +P H
Sbjct 81 ILKKTKGSQSKGSV-RFGSVTVFLFQRCQGYSSVPSHGGCTLGMVRWHTARQQFTLPEHA 139
Query 58 QK 59
++
Sbjct 140 EE 141
> dre:100332857 retinitis pigmentosa RP1 protein-like
Length=2179
Score = 29.6 bits (65), Expect = 2.5, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query 65 TEMNKKVYRIGSGNDPRNGSTDADLTEKRITPMGGFPH 102
T +KK Y G G+ +N + D+TE I+P PH
Sbjct 302 TSKSKKSYEDGCGSQAKNKCSHTDITEAEISPT---PH 336
> bbo:BBOV_IV000250 21.m02906; glucosamine--fructose-6-phosphate
aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate
aminotransferase (isomerizing) [EC:2.6.1.16]
Length=723
Score = 29.3 bits (64), Expect = 2.8, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 0/52 (0%)
Query 41 IGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGNDPRNGSTDADLTEK 92
I + +P V+F++P HG EM K+ + +G+ A L ++
Sbjct 378 ISSLNPDDVRFEIPVHGDANLLKNIEMRHKINLVAAGSSHNAAKYVASLFQR 429
> mmu:13710 Elf3, ESE-1, ESX, jen; E74-like factor 3; K09429 E74-like
factor 3/5
Length=391
Score = 28.1 bits (61), Expect = 6.4, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 0/27 (0%)
Query 77 GNDPRNGSTDADLTEKRITPMGGFPHY 103
+D D DLTE ++ P GFP Y
Sbjct 229 ASDSGGSDVDLDLTESKVFPRDGFPDY 255
> xla:398892 araf-a, MGC68526, a-raf, araf, araf1, pks2, rafa1;
v-raf murine sarcoma 3611 viral oncogene homolog; K08845 A-Raf
proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]
Length=643
Score = 28.1 bits (61), Expect = 6.6, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query 45 HPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGNDPRNGS-TDADLTEKRITPMGGFPHY 103
HP F P GQ HR+ V+ I S P + S + L +TP+ G P
Sbjct 236 HPGSASFSFPGEGQPLQRHRSTSTPNVH-IDSTTGPVDNSIIEEALRSAAVTPVDGPPKS 294
Query 104 GEVR 107
+ R
Sbjct 295 AQPR 298
> dre:336283 mrpl3, fj61d01, wu:fj61d01, zgc:66423; mitochondrial
ribosomal protein L3
Length=319
Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query 2 EMLDVIGVTKGHGVKGVVSRFGVTRLP-----RKTHRGLRKVACIGAWHPARVQFQVPRH 56
+ +DV T G G +GV+ R+G P KTHR R A PA+V
Sbjct 176 QYVDVTAKTIGKGFQGVMKRWGFKGQPASHGQTKTHR--RPGALGPGGDPAKVFKGTKMP 233
Query 57 GQKGYFHRTEMNKKVYRIGS 76
G+ G + T K++R+ +
Sbjct 234 GRMGNVYNTNFGLKIWRVNT 253
Lambda K H
0.322 0.141 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2013067560
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40