bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_0867_orf1
Length=136
Score E
Sequences producing significant alignments: (Bits) Value
cpv:cgd8_840 26S proteasome regulatory subunit S10b like AAA+ ... 272 2e-73
tgo:TGME49_028210 26S proteasome regulatory ATPase subunit, pu... 272 2e-73
pfa:PF13_0033 26S proteasome regulatory subunit, putative; K03... 265 4e-71
bbo:BBOV_II003900 18.m06325; 26S proteasome AAA-ATPase subunit... 262 2e-70
tpv:TP04_0152 26S proteasome regulatory subunit; K03064 26S pr... 259 2e-69
ath:AT5G43010 RPT4A; RPT4A; ATPase; K03064 26S proteasome regu... 256 2e-68
cel:F23F1.8 rpt-4; proteasome Regulatory Particle, ATPase-like... 251 4e-67
xla:779382 psmc6, MGC114813, cadp44, sug2; proteasome (prosome... 246 2e-65
dre:321585 psmc6, MGC101799, fb20g04, wu:fb20g04, wu:fc85c10; ... 246 2e-65
dre:100330292 26S protease regulatory subunit S10B-like 245 3e-65
mmu:67089 Psmc6, 2300001E01Rik, AI451058, MGC151129; proteasom... 245 3e-65
hsa:5706 PSMC6, CADP44, MGC12520, P44, SUG2, p42; proteasome (... 244 4e-65
sce:YOR259C RPT4, CRL13, PCS1, SUG2; One of six ATPases of the... 239 1e-63
ath:AT1G45000 26S proteasome regulatory complex subunit p42D, ... 198 5e-51
cel:Y49E10.1 rpt-6; proteasome Regulatory Particle, ATPase-lik... 188 4e-48
dre:445285 psmc5, wu:fa14g03, wu:fb23a11, zgc:92464; proteasom... 188 4e-48
mmu:19184 Psmc5, mSUG1; protease (prosome, macropain) 26S subu... 188 4e-48
cpv:cgd6_920 26s protease regulatory subunit 8 ; K03066 26S pr... 188 4e-48
tgo:TGME49_029950 26S protease regulatory subunit 6b, putative... 188 5e-48
mmu:19181 Psmc2; proteasome (prosome, macropain) 26S subunit, ... 188 5e-48
hsa:5705 PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG; p... 188 5e-48
cel:C52E4.4 rpt-1; proteasome Regulatory Particle, ATPase-like... 188 5e-48
xla:443908 psmc5, MGC53028, MGC80185, sug-1, sug1, tbp10; prot... 187 6e-48
xla:399327 psmc2, xMSS1; proteasome (prosome, macropain) 26S s... 187 6e-48
dre:393941 psmc2, MGC63995, zgc:63995; proteasome (prosome, ma... 187 6e-48
mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macro... 187 8e-48
hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome ... 187 8e-48
pfa:PF10_0081 26S proteasome regulatory subunit 4, putative; K... 187 9e-48
ath:AT5G58290 RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE ... 187 9e-48
ath:AT1G53750 RPT1A; RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ... 187 9e-48
pfa:PFL2345c tat-binding protein homolog; K03066 26S proteasom... 186 2e-47
sce:YGL048C RPT6, CIM3, CRL3, SCB68, SUG1; One of six ATPases ... 186 2e-47
cpv:cgd4_2540 26S proteasome regulatory subunit 26b like AAA A... 186 2e-47
ath:AT5G19990 RPT6A; RPT6A (REGULATORY PARTICLE TRIPLE-A ATPAS... 185 4e-47
ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03... 184 5e-47
cel:F56F11.4 hypothetical protein; K03066 26S proteasome regul... 184 5e-47
ath:AT1G53780 ATP binding / ATPase/ hydrolase/ nucleoside-trip... 184 6e-47
dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome (p... 184 7e-47
dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,... 184 7e-47
tgo:TGME49_061010 26S protease regulatory subunit 8, putative ... 183 1e-46
xla:397968 psmc5, xsug1; XSUG1 protein; K03066 26S proteasome ... 183 1e-46
bbo:BBOV_II004930 18.m06410; 26s proteasome aaa-ATPase subunit... 183 2e-46
tpv:TP04_0031 26S proteasome aaa-ATPase subunit Rpt3 (EC:3.6.4... 182 2e-46
tgo:TGME49_067080 26S proteasome subunit 4, putative ; K03062 ... 182 2e-46
tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S ... 182 2e-46
hsa:652826 26S protease regulatory subunit 6B-like; K03063 26S... 182 3e-46
hsa:5704 PSMC4, MGC13687, MGC23214, MGC8570, MIP224, S6, TBP7;... 182 3e-46
xla:398853 psmc4, MGC68784; proteasome (prosome, macropain) 26... 182 3e-46
bbo:BBOV_IV009940 23.m06337; 26S protease regulatory subunit 7... 182 3e-46
mmu:23996 Psmc4, CIP21, MGC103150, MIP224; proteasome (prosome... 182 3e-46
> cpv:cgd8_840 26S proteasome regulatory subunit S10b like AAA+
ATpase ; K03064 26S proteasome regulatory subunit T4
Length=406
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/136 (93%), Positives = 135/136 (99%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARAMAS+M+CNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP
Sbjct 185 KGVLLYGPPGTGKTLLARAMASSMNCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 244
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
C+IFMDE+DAIGG+RFSQGTSADREIQRTLMELLNQLDGFDELG VKIIMATNRPDVLDP
Sbjct 245 CVIFMDEIDAIGGKRFSQGTSADREIQRTLMELLNQLDGFDELGAVKIIMATNRPDVLDP 304
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRK+EIP+
Sbjct 305 ALLRPGRLDRKVEIPL 320
> tgo:TGME49_028210 26S proteasome regulatory ATPase subunit,
putative ; K03064 26S proteasome regulatory subunit T4
Length=398
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/136 (94%), Positives = 134/136 (98%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARAMASNM+CNFMKVVASAIVDKYIGESARVIREMF YA+DH+P
Sbjct 178 KGVLLYGPPGTGKTLLARAMASNMNCNFMKVVASAIVDKYIGESARVIREMFAYARDHEP 237
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CIIFMDE+DAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELG VKIIMATNRPDVLDP
Sbjct 238 CIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGAVKIIMATNRPDVLDP 297
Query 121 ALMRPGRLDRKIEIPM 136
ALMRPGRLDRKIEIP+
Sbjct 298 ALMRPGRLDRKIEIPL 313
> pfa:PF13_0033 26S proteasome regulatory subunit, putative; K03064
26S proteasome regulatory subunit T4
Length=393
Score = 265 bits (676), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 122/136 (89%), Positives = 132/136 (97%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARAMASN++CNFM++V SAIVDKYIGESAR+IREMF YAK+HQP
Sbjct 172 KGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQP 231
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CIIFMDE+DAIGGRRFSQGTSADREIQRTLMELLN LDGF+ELG VKIIMATNRPDVLDP
Sbjct 232 CIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDP 291
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRKIEIP+
Sbjct 292 ALVRPGRLDRKIEIPL 307
> bbo:BBOV_II003900 18.m06325; 26S proteasome AAA-ATPase subunit
RPT4a; K03064 26S proteasome regulatory subunit T4
Length=404
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 121/136 (88%), Positives = 133/136 (97%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTL+A+A+AS+M C+F+KVVASA+VDKYIGESAR+IREMFGYAKDHQP
Sbjct 183 KGVLLYGPPGTGKTLMAKALASSMDCHFLKVVASAVVDKYIGESARIIREMFGYAKDHQP 242
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CIIFMDE+DAIGG+RFSQGTSADREIQRTLMELL LDGFDELGQVKIIMATNRPDVLDP
Sbjct 243 CIIFMDEIDAIGGKRFSQGTSADREIQRTLMELLTHLDGFDELGQVKIIMATNRPDVLDP 302
Query 121 ALMRPGRLDRKIEIPM 136
ALMRPGR+DRKIEIP+
Sbjct 303 ALMRPGRIDRKIEIPL 318
> tpv:TP04_0152 26S proteasome regulatory subunit; K03064 26S
proteasome regulatory subunit T4
Length=415
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/136 (87%), Positives = 133/136 (97%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+A+++ CNF+KVVASA+VDKYIGESA++IREMFGYAKD+QP
Sbjct 194 KGVLLYGPPGTGKTLLARALANDLGCNFLKVVASAVVDKYIGESAKIIREMFGYAKDNQP 253
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CIIF+DE+DAIGGRRFSQGTSADREIQRTLMELL LDGFDELGQVKIIMATNRPDVLDP
Sbjct 254 CIIFIDEIDAIGGRRFSQGTSADREIQRTLMELLTHLDGFDELGQVKIIMATNRPDVLDP 313
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGR+DRKIEIP+
Sbjct 314 ALLRPGRIDRKIEIPL 329
> ath:AT5G43010 RPT4A; RPT4A; ATPase; K03064 26S proteasome regulatory
subunit T4
Length=399
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 118/136 (86%), Positives = 132/136 (97%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+ASN+ NF+KVV+SAI+DKYIGESAR+IREMF YA++HQP
Sbjct 174 KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQP 233
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CIIFMDE+DAIGGRRFS+GTSADREIQRTLMELLNQLDGFD LG+VK+IMATNRPDVLDP
Sbjct 234 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDP 293
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRKIEIP+
Sbjct 294 ALLRPGRLDRKIEIPL 309
> cel:F23F1.8 rpt-4; proteasome Regulatory Particle, ATPase-like
family member (rpt-4); K03064 26S proteasome regulatory subunit
T4
Length=406
Score = 251 bits (641), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 128/134 (95%), Gaps = 0/134 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KG LL+GPPGTGKTLLARA+AS + CNF+KVV+SAIVDKYIGESAR+IREMF YA+DHQP
Sbjct 185 KGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQP 244
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CI+FMDE+DAIGGRRFS+GTSADREIQRTLMELLNQLDGFD LG+VK+IMATNRPD LDP
Sbjct 245 CIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDP 304
Query 121 ALMRPGRLDRKIEI 134
AL+RPGRLDRKIEI
Sbjct 305 ALLRPGRLDRKIEI 318
> xla:779382 psmc6, MGC114813, cadp44, sug2; proteasome (prosome,
macropain) 26S subunit, ATPase, 6; K03064 26S proteasome
regulatory subunit T4
Length=389
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/136 (83%), Positives = 127/136 (93%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KG LLYGPPGTGKTLLARA+AS + CNF+KVV+S+IVDKYIGESAR+IREMF YA+DHQP
Sbjct 168 KGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQP 227
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CIIFMDE+DAIGGRRFS+GTSADREIQRTLMELLNQ+DGFD L +VK+IMATNRPD LDP
Sbjct 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRKI I +
Sbjct 288 ALLRPGRLDRKIHIEL 303
> dre:321585 psmc6, MGC101799, fb20g04, wu:fb20g04, wu:fc85c10;
proteasome (prosome, macropain) 26S subunit, ATPase, 6; K03064
26S proteasome regulatory subunit T4
Length=389
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/136 (83%), Positives = 127/136 (93%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KG LLYGPPGTGKTLLARA+AS + CNF+KVV+S+IVDKYIGESAR+IREMF YA+DHQP
Sbjct 168 KGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQP 227
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CIIFMDE+DAIGGRRFS+GTSADREIQRTLMELLNQ+DGFD L +VK+IMATNRPD LDP
Sbjct 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRKI I +
Sbjct 288 ALLRPGRLDRKIHIEL 303
> dre:100330292 26S protease regulatory subunit S10B-like
Length=350
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 113/136 (83%), Positives = 127/136 (93%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KG LLYGPPGTGKTLLARA+AS + CNF+KVV+S+IVDKYIGESAR+IREMF YA+DHQP
Sbjct 168 KGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQP 227
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CIIFMDE+DAIGGRRFS+GTSADREIQRTLMELLNQ+DGFD L +VK+IMATNRPD LDP
Sbjct 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRKI I +
Sbjct 288 ALLRPGRLDRKIHIEL 303
> mmu:67089 Psmc6, 2300001E01Rik, AI451058, MGC151129; proteasome
(prosome, macropain) 26S subunit, ATPase, 6; K03064 26S
proteasome regulatory subunit T4
Length=389
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 113/136 (83%), Positives = 127/136 (93%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KG LLYGPPGTGKTLLARA+AS + CNF+KVV+S+IVDKYIGESAR+IREMF YA+DHQP
Sbjct 168 KGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQP 227
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CIIFMDE+DAIGGRRFS+GTSADREIQRTLMELLNQ+DGFD L +VK+IMATNRPD LDP
Sbjct 228 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRKI I +
Sbjct 288 ALLRPGRLDRKIHIDL 303
> hsa:5706 PSMC6, CADP44, MGC12520, P44, SUG2, p42; proteasome
(prosome, macropain) 26S subunit, ATPase, 6; K03064 26S proteasome
regulatory subunit T4
Length=403
Score = 244 bits (624), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 113/136 (83%), Positives = 127/136 (93%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KG LLYGPPGTGKTLLARA+AS + CNF+KVV+S+IVDKYIGESAR+IREMF YA+DHQP
Sbjct 182 KGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQP 241
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CIIFMDE+DAIGGRRFS+GTSADREIQRTLMELLNQ+DGFD L +VK+IMATNRPD LDP
Sbjct 242 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 301
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRKI I +
Sbjct 302 ALLRPGRLDRKIHIDL 317
> sce:YOR259C RPT4, CRL13, PCS1, SUG2; One of six ATPases of the
19S regulatory particle of the 26S proteasome involved in
the degradation of ubiquitinated substrates; required for spindle
pole body duplication; localized mainly to the nucleus
throughout the cell cycle; K03064 26S proteasome regulatory
subunit T4
Length=437
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/136 (81%), Positives = 124/136 (91%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLA+A+A+ + NF+ AS IVDKYIGESAR+IREMF YAK+H+P
Sbjct 216 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEP 275
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CIIFMDEVDAIGGRRFS+GTSADREIQRTLMELL Q+DGFD LGQ KIIMATNRPD LDP
Sbjct 276 CIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDP 335
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRK+EIP+
Sbjct 336 ALLRPGRLDRKVEIPL 351
> ath:AT1G45000 26S proteasome regulatory complex subunit p42D,
putative; K03064 26S proteasome regulatory subunit T4
Length=335
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 90/105 (85%), Positives = 102/105 (97%), Gaps = 0/105 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+ASN+ NF+KVV+SAI+DKYIGESAR+IREMF YA++HQP
Sbjct 174 KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQP 233
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQ 105
CIIFMDE+DAIGGRRFS+GTSADREIQRTLMELLNQLDGFD+LG+
Sbjct 234 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK 278
> cel:Y49E10.1 rpt-6; proteasome Regulatory Particle, ATPase-like
family member (rpt-6); K03066 26S proteasome regulatory
subunit T6
Length=416
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 107/135 (79%), Gaps = 0/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLL+GPPGTGKTLLARA+A + C F++V S +V K+IGE AR++RE+F A++H P
Sbjct 194 KGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 253
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIFMDE+D+IG R + D E+QRT++ELLNQLDGF+ +K+IMATNR D+LDP
Sbjct 254 SIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDP 313
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 314 ALLRPGRIDRKIEFP 328
> dre:445285 psmc5, wu:fa14g03, wu:fb23a11, zgc:92464; proteasome
(prosome, macropain) 26S subunit, ATPase, 5; K03066 26S
proteasome regulatory subunit T6
Length=406
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 107/135 (79%), Gaps = 0/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+A + C F++V S +V K+IGE AR++RE+F A++H P
Sbjct 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIFMDE+D+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD
Sbjct 244 SIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDS 303
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 304 ALLRPGRIDRKIEFP 318
> mmu:19184 Psmc5, mSUG1; protease (prosome, macropain) 26S subunit,
ATPase 5; K03066 26S proteasome regulatory subunit T6
Length=406
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 107/135 (79%), Gaps = 0/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+A + C F++V S +V K+IGE AR++RE+F A++H P
Sbjct 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIFMDE+D+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD
Sbjct 244 SIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDS 303
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 304 ALLRPGRIDRKIEFP 318
> cpv:cgd6_920 26s protease regulatory subunit 8 ; K03066 26S
proteasome regulatory subunit T6
Length=393
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 85/135 (62%), Positives = 110/135 (81%), Gaps = 1/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+A + C F++V S +V KYIGE +R++RE+F A++H P
Sbjct 172 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 231
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
+IFMDE+D+IG +R ++G S D E+QRT++ELLNQLDGF+ +KIIMATNR D+LD
Sbjct 232 SLIFMDEIDSIGSQR-TEGESGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDD 290
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 291 ALLRPGRIDRKIEFP 305
> tgo:TGME49_029950 26S protease regulatory subunit 6b, putative
; K03063 26S proteasome regulatory subunit T3
Length=409
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 109/135 (80%), Gaps = 0/135 (0%)
Query 2 GVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQPC 61
GVLLYGPPGTGKT+LA+A+A+N + F++VV S V KY+GE R++R++F A+++ P
Sbjct 191 GVLLYGPPGTGKTMLAKAVANNTTATFIRVVGSEFVQKYLGEGPRMVRDVFRLARENSPA 250
Query 62 IIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDPA 121
I+F+DEVDAI +RF T ADRE+QR L+ELLNQ+DGFD+ VK+IMATNR D LDPA
Sbjct 251 IVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTTVKVIMATNRADTLDPA 310
Query 122 LMRPGRLDRKIEIPM 136
L+RPGRLDRKIE P+
Sbjct 311 LLRPGRLDRKIEFPL 325
> mmu:19181 Psmc2; proteasome (prosome, macropain) 26S subunit,
ATPase 2; K03061 26S proteasome regulatory subunit T1
Length=475
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 107/136 (78%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLL+GPPGTGKTL ARA+A+ F++V+ S +V KY+GE AR++RE+F A+ +
Sbjct 252 KGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 311
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
C+IF DE+DAIGG RF G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDP
Sbjct 312 CLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDP 371
Query 121 ALMRPGRLDRKIEIPM 136
ALMRPGRLDRKIE +
Sbjct 372 ALMRPGRLDRKIEFSL 387
> hsa:5705 PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG;
proteasome (prosome, macropain) 26S subunit, ATPase, 5; K03066
26S proteasome regulatory subunit T6
Length=398
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 107/135 (79%), Gaps = 0/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+A + C F++V S +V K+IGE AR++RE+F A++H P
Sbjct 176 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 235
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIFMDE+D+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD
Sbjct 236 SIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDS 295
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 296 ALLRPGRIDRKIEFP 310
> cel:C52E4.4 rpt-1; proteasome Regulatory Particle, ATPase-like
family member (rpt-1); K03061 26S proteasome regulatory subunit
T1
Length=435
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 107/136 (78%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTL ARA+A+ F++V+ S +V KY+GE AR++RE+F A+ +
Sbjct 212 KGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 271
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
C+IF DE+DA+GG RF G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDP
Sbjct 272 CLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDP 331
Query 121 ALMRPGRLDRKIEIPM 136
ALMRPGRLDRK+E +
Sbjct 332 ALMRPGRLDRKVEFAL 347
> xla:443908 psmc5, MGC53028, MGC80185, sug-1, sug1, tbp10; proteasome
(prosome, macropain) 26S subunit, ATPase, 5; K03066
26S proteasome regulatory subunit T6
Length=415
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 107/135 (79%), Gaps = 0/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+A + C F++V S +V K+IGE AR++RE+F A++H P
Sbjct 193 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 252
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIFMDE+D+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD
Sbjct 253 SIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDS 312
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 313 ALLRPGRIDRKIEFP 327
> xla:399327 psmc2, xMSS1; proteasome (prosome, macropain) 26S
subunit, ATPase, 2; K03061 26S proteasome regulatory subunit
T1
Length=433
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 107/136 (78%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLL+GPPGTGKTL ARA+A+ F++V+ S +V KY+GE AR++RE+F A+ +
Sbjct 210 KGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 269
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
C+IF DE+DAIGG RF G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDP
Sbjct 270 CLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDP 329
Query 121 ALMRPGRLDRKIEIPM 136
ALMRPGRLDRKIE +
Sbjct 330 ALMRPGRLDRKIEFSL 345
> dre:393941 psmc2, MGC63995, zgc:63995; proteasome (prosome,
macropain) 26S subunit, ATPase 2; K03061 26S proteasome regulatory
subunit T1
Length=433
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 107/136 (78%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLL+GPPGTGKTL ARA+A+ F++V+ S +V KY+GE AR++RE+F A+ +
Sbjct 210 KGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 269
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
C+IF DE+DAIGG RF G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDP
Sbjct 270 CLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDP 329
Query 121 ALMRPGRLDRKIEIPM 136
ALMRPGRLDRKIE +
Sbjct 330 ALMRPGRLDRKIEFSL 345
> mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macropain)
26S subunit, ATPase 1; K03062 26S proteasome regulatory
subunit T2
Length=440
Score = 187 bits (475), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 111/136 (81%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGV+LYGPPGTGKTLLA+A+A+ S F++VV S ++ KY+G+ +++RE+F A++H P
Sbjct 220 KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP 279
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
I+F+DE+DAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDP
Sbjct 280 SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 339
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGR+DRKIE P+
Sbjct 340 ALIRPGRIDRKIEFPL 355
> hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome
(prosome, macropain) 26S subunit, ATPase, 1; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 187 bits (475), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 111/136 (81%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGV+LYGPPGTGKTLLA+A+A+ S F++VV S ++ KY+G+ +++RE+F A++H P
Sbjct 220 KGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP 279
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
I+F+DE+DAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDP
Sbjct 280 SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 339
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGR+DRKIE P+
Sbjct 340 ALIRPGRIDRKIEFPL 355
> pfa:PF10_0081 26S proteasome regulatory subunit 4, putative;
K03062 26S proteasome regulatory subunit T2
Length=448
Score = 187 bits (475), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 111/135 (82%), Gaps = 0/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGV+LYGPPGTGKTLLA+A+A+ S F++VV S ++ KY+G+ +++REMF A++H P
Sbjct 228 KGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAP 287
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
I+F+DE+DA+G +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR D LDP
Sbjct 288 SIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDP 347
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKI++P
Sbjct 348 ALIRPGRIDRKIQLP 362
> ath:AT5G58290 RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE
3); ATPase; K03063 26S proteasome regulatory subunit T3
Length=408
Score = 187 bits (474), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 86/136 (63%), Positives = 109/136 (80%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
+GVLLYGPPGTGKT+LA+A+A++ + F++VV S V KY+GE R++R++F AK++ P
Sbjct 190 RGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 249
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIF+DEVDAI RF T ADRE+QR LMELLNQ+DGFD+ VK+IMATNR D LDP
Sbjct 250 AIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDP 309
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRKIE P+
Sbjct 310 ALLRPGRLDRKIEFPL 325
> ath:AT1G53750 RPT1A; RPT1A (REGULATORY PARTICLE TRIPLE-A 1A);
ATPase; K03061 26S proteasome regulatory subunit T1
Length=426
Score = 187 bits (474), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 83/134 (61%), Positives = 106/134 (79%), Gaps = 0/134 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVL YGPPGTGKTLLARA+A+ F++V+ S +V KY+GE AR++RE+F A+ +
Sbjct 203 KGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKA 262
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CI+F DEVDAIGG RF G D E+QRT++E++NQLDGFD G +K++MATNRPD LDP
Sbjct 263 CIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDP 322
Query 121 ALMRPGRLDRKIEI 134
AL+RPGRLDRK+E
Sbjct 323 ALLRPGRLDRKVEF 336
> pfa:PFL2345c tat-binding protein homolog; K03066 26S proteasome
regulatory subunit T6
Length=435
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+A + C F++V S +V KYIGE +R++RE+F A++H P
Sbjct 214 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 273
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIFMDE+D+IG +R +G D E+QRT+MELLNQLDGF+ +K+IM TNR D+LD
Sbjct 274 SIIFMDEIDSIGSQRI-EGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDE 332
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 333 ALLRPGRIDRKIEFP 347
> sce:YGL048C RPT6, CIM3, CRL3, SCB68, SUG1; One of six ATPases
of the 19S regulatory particle of the 26S proteasome involved
in the degradation of ubiquitinated substrates; bound by
ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly
to the nucleus throughout the cell cycle; K03066 26S proteasome
regulatory subunit T6
Length=405
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 106/135 (78%), Gaps = 0/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGV+LYGPPGTGKTLLARA+A + C F++V + +V KYIGE +R++RE+F A++H P
Sbjct 183 KGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAP 242
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIFMDE+D+IG R D E+QRT++ELLNQLDGF+ +KIIMATNR D+LDP
Sbjct 243 SIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDP 302
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 303 ALLRPGRIDRKIEFP 317
> cpv:cgd4_2540 26S proteasome regulatory subunit 26b like AAA
ATpase ; K03063 26S proteasome regulatory subunit T3
Length=401
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 82/135 (60%), Positives = 109/135 (80%), Gaps = 0/135 (0%)
Query 2 GVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQPC 61
GVLLYGPPGTGKT+LA+A+A++ + F++VV S V KY+GE R++R++F A+++ P
Sbjct 183 GVLLYGPPGTGKTMLAKAVANHTTATFIRVVGSEFVQKYLGEGPRMVRDVFRLARENSPA 242
Query 62 IIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDPA 121
I+F+DEVD+I +RF T ADRE+QR L+ELLNQ+DGFD+ VK+IMATNR D LDPA
Sbjct 243 IVFIDEVDSIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPA 302
Query 122 LMRPGRLDRKIEIPM 136
L+RPGRLDRKIE P+
Sbjct 303 LLRPGRLDRKIEFPL 317
> ath:AT5G19990 RPT6A; RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE
6A); ATPase; K03066 26S proteasome regulatory subunit T6
Length=419
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 109/136 (80%), Gaps = 1/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+A + C F++V S +V KYIGE +R++RE+F A++H P
Sbjct 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
Query 61 CIIFMDEVDAIGGRRFSQGT-SADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLD 119
IIFMDE+D+IG R G+ + D E+QRT++ELLNQLDGF+ ++K++MATNR D+LD
Sbjct 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315
Query 120 PALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 316 QALLRPGRIDRKIEFP 331
> ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03066
26S proteasome regulatory subunit T6
Length=419
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 109/136 (80%), Gaps = 1/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+A + C F++V S +V KYIGE +R++RE+F A++H P
Sbjct 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
Query 61 CIIFMDEVDAIGGRRFSQGT-SADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLD 119
IIFMDE+D+IG R G+ + D E+QRT++ELLNQLDGF+ ++K++MATNR D+LD
Sbjct 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315
Query 120 PALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 316 QALLRPGRIDRKIEFP 331
> cel:F56F11.4 hypothetical protein; K03066 26S proteasome regulatory
subunit T6
Length=432
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 105/135 (77%), Gaps = 0/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+A + C F++V S +V K+IGE AR++RE+F A++H P
Sbjct 210 KGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 269
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIFMDE+D+IG R D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD
Sbjct 270 SIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDS 329
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 330 ALLRPGRIDRKIEFP 344
> ath:AT1G53780 ATP binding / ATPase/ hydrolase/ nucleoside-triphosphatase/
nucleotide binding / peptidyl-prolyl cis-trans
isomerase; K03061 26S proteasome regulatory subunit T1
Length=598
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 107/134 (79%), Gaps = 0/134 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVL YGPPG+GKTL+ARA+A+ F++VV S +V KYIGE AR++RE+F A+ +
Sbjct 374 KGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKA 433
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CI+F DE+DAIGG RF G +D E+QRT++E+L QLDGFD G +K++MATNRPD+LDP
Sbjct 434 CILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDP 493
Query 121 ALMRPGRLDRKIEI 134
AL+RPGRLDRK+E
Sbjct 494 ALLRPGRLDRKVEF 507
> dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome
(prosome, macropain) 26S subunit, ATPase, 1a; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 110/136 (80%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGV+LYG PGTGKTLLA+A+A+ S F++VV S ++ KY+G+ +++RE+F A++H P
Sbjct 220 KGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP 279
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
I+F+DE+DAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDP
Sbjct 280 SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 339
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGR+DRKIE P+
Sbjct 340 ALIRPGRIDRKIEFPL 355
> dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,
macropain) 26S subunit, ATPase, 1b; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 110/136 (80%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGV+LYG PGTGKTLLA+A+A+ S F++VV S ++ KY+G+ +++RE+F A++H P
Sbjct 220 KGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP 279
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
I+F+DE+DAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDP
Sbjct 280 SIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDP 339
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGR+DRKIE P+
Sbjct 340 ALIRPGRIDRKIEFPL 355
> tgo:TGME49_061010 26S protease regulatory subunit 8, putative
; K03066 26S proteasome regulatory subunit T6
Length=409
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+A + C F++V +V KYIGE +R++RE+F A++H P
Sbjct 188 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGGELVQKYIGEGSRMVRELFVMAREHAP 247
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIFMDE+D+IG +R ++G D E+QRT+MELLNQLDGF+ +K+IM TNR D+LD
Sbjct 248 SIIFMDEIDSIGSQR-TEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDD 306
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 307 ALLRPGRIDRKIEFP 321
> xla:397968 psmc5, xsug1; XSUG1 protein; K03066 26S proteasome
regulatory subunit T6
Length=461
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTLLARA+A + C F++V S +V K+IGE AR++RE+F A++H P
Sbjct 179 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 238
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIFMDE+D+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD
Sbjct 239 SIIFMDEIDSIGS-RLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDS 297
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKIE P
Sbjct 298 ALLRPGRIDRKIEFP 312
> bbo:BBOV_II004930 18.m06410; 26s proteasome aaa-ATPase subunit
Rpt3; K03063 26S proteasome regulatory subunit T3
Length=399
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 82/135 (60%), Positives = 108/135 (80%), Gaps = 0/135 (0%)
Query 2 GVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQPC 61
GVLLYGPPGTGKT+LA+A+A + +F++VV S V KY+GE R++R++F A+++ P
Sbjct 181 GVLLYGPPGTGKTMLAKAVAHHTGASFIRVVGSEFVQKYLGEGPRMVRDIFRLARENAPA 240
Query 62 IIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDPA 121
I+F+DEVD+I +RF T ADRE+QR L+ELLNQ+DGFD+ VK+IMATNR D LDPA
Sbjct 241 ILFIDEVDSIATKRFDAQTGADREVQRILLELLNQMDGFDQNAAVKVIMATNRADTLDPA 300
Query 122 LMRPGRLDRKIEIPM 136
L+RPGRLDRKIE P+
Sbjct 301 LLRPGRLDRKIEFPL 315
> tpv:TP04_0031 26S proteasome aaa-ATPase subunit Rpt3 (EC:3.6.4.8);
K03063 26S proteasome regulatory subunit T3
Length=396
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 82/135 (60%), Positives = 106/135 (78%), Gaps = 0/135 (0%)
Query 2 GVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQPC 61
GVLLYGPPGTGKT+LA+A+A + F++ V S V KY+GE R++R++F A+++ P
Sbjct 178 GVLLYGPPGTGKTMLAKAVAHHTDATFIRFVGSEFVQKYLGEGPRMVRDIFRLARENAPS 237
Query 62 IIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDPA 121
I+F+DEVDAI +RF T ADRE+QR L+ELLNQ+DGFD+ VK+IMATNR D LDPA
Sbjct 238 ILFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNASVKVIMATNRADTLDPA 297
Query 122 LMRPGRLDRKIEIPM 136
L+RPGRLDRKIE P+
Sbjct 298 LLRPGRLDRKIEFPL 312
> tgo:TGME49_067080 26S proteasome subunit 4, putative ; K03062
26S proteasome regulatory subunit T2
Length=441
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 110/135 (81%), Gaps = 0/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGV+LYGPPGTGKTLLA+A+A+ S F++VV S ++ KY+G+ +++REMF A +H P
Sbjct 221 KGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKLAHEHAP 280
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
I+F+DE+DA+G +R+ + ++EIQRT++ELLNQLDGF+ G VK+IMATNR + LDP
Sbjct 281 SIVFIDEIDAVGTKRYDATSGGEKEIQRTMLELLNQLDGFESKGDVKVIMATNRIESLDP 340
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKI++P
Sbjct 341 ALIRPGRIDRKIQLP 355
> tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S
proteasome regulatory subunit T2
Length=415
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 110/135 (81%), Gaps = 0/135 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGV+LYGPPGTGKTLLA+A+A+ S F++VV S ++ KY+GE +++REMF A+D+ P
Sbjct 195 KGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGEGPKLVREMFKVAEDNAP 254
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIF+DE+DAIG +R+ + ++EIQRT++ELLNQLDGFD VK+IMATN+ + LDP
Sbjct 255 SIIFIDEIDAIGTKRYDATSGGEKEIQRTMLELLNQLDGFDSQSDVKVIMATNKIESLDP 314
Query 121 ALMRPGRLDRKIEIP 135
AL+RPGR+DRKI++P
Sbjct 315 ALIRPGRIDRKIQLP 329
> hsa:652826 26S protease regulatory subunit 6B-like; K03063 26S
proteasome regulatory subunit T3
Length=414
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 108/136 (79%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
+GVL+YGPPG GKT+LA+A+A + + F++VV S V KY+GE R++R++F AK++ P
Sbjct 196 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 255
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIF+DE+DAI +RF T ADRE+QR L+ELLNQ+DGFD+ VK+IMATNR D LDP
Sbjct 256 AIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDP 315
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRKIE P+
Sbjct 316 ALLRPGRLDRKIEFPL 331
> hsa:5704 PSMC4, MGC13687, MGC23214, MGC8570, MIP224, S6, TBP7;
proteasome (prosome, macropain) 26S subunit, ATPase, 4; K03063
26S proteasome regulatory subunit T3
Length=418
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 108/136 (79%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
+GVL+YGPPG GKT+LA+A+A + + F++VV S V KY+GE R++R++F AK++ P
Sbjct 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 259
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIF+DE+DAI +RF T ADRE+QR L+ELLNQ+DGFD+ VK+IMATNR D LDP
Sbjct 260 AIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDP 319
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRKIE P+
Sbjct 320 ALLRPGRLDRKIEFPL 335
> xla:398853 psmc4, MGC68784; proteasome (prosome, macropain)
26S subunit, ATPase, 4; K03063 26S proteasome regulatory subunit
T3
Length=420
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 108/136 (79%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
+GVL+YGPPG GKT+LA+A+A + + F++VV S V KY+GE R++R++F AK++ P
Sbjct 202 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 261
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIF+DE+DAI +RF T ADRE+QR L+ELLNQ+DGFD+ VK+IMATNR D LDP
Sbjct 262 AIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDP 321
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRKIE P+
Sbjct 322 ALLRPGRLDRKIEFPL 337
> bbo:BBOV_IV009940 23.m06337; 26S protease regulatory subunit
7; K03061 26S proteasome regulatory subunit T1
Length=425
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 82/133 (61%), Positives = 105/133 (78%), Gaps = 0/133 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
KGVLLYGPPGTGKTL ARA+A+ F+ V+ S +V KY+GE AR++RE+F A+ +
Sbjct 202 KGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQKYVGEGARLVRELFQMARSKKA 261
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
CI+F+DEVDAIGG R + D E+QRT++E++NQLDGFD G +K+IMATNRPD LDP
Sbjct 262 CILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDARGNIKVIMATNRPDTLDP 321
Query 121 ALMRPGRLDRKIE 133
AL+RPGR+DRKIE
Sbjct 322 ALLRPGRIDRKIE 334
> mmu:23996 Psmc4, CIP21, MGC103150, MIP224; proteasome (prosome,
macropain) 26S subunit, ATPase, 4; K03063 26S proteasome
regulatory subunit T3
Length=418
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 108/136 (79%), Gaps = 0/136 (0%)
Query 1 KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 60
+GVL+YGPPG GKT+LA+A+A + + F++VV S V KY+GE R++R++F AK++ P
Sbjct 200 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAP 259
Query 61 CIIFMDEVDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP 120
IIF+DE+DAI +RF T ADRE+QR L+ELLNQ+DGFD+ VK+IMATNR D LDP
Sbjct 260 AIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDP 319
Query 121 ALMRPGRLDRKIEIPM 136
AL+RPGRLDRKIE P+
Sbjct 320 ALLRPGRLDRKIEFPL 335
Lambda K H
0.323 0.140 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2362384368
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40