bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_1068_orf1
Length=169
Score E
Sequences producing significant alignments: (Bits) Value
dre:406386 rabggtb, wu:fj12b07, zgc:56443; Rab geranylgeranylt... 187 1e-47
hsa:5876 RABGGTB, GGTB; Rab geranylgeranyltransferase, beta su... 185 6e-47
xla:734339 rabggtb, MGC85147; Rab geranylgeranyltransferase, b... 184 1e-46
mmu:19352 Rabggtb; RAB geranylgeranyl transferase, b subunit (... 183 3e-46
ath:AT5G12210 geranylgeranyl transferase type II beta subunit,... 155 6e-38
sce:YPR176C BET2; Bet2p (EC:2.5.1.60); K05956 geranylgeranyl t... 154 2e-37
cel:B0280.1 hypothetical protein; K05956 geranylgeranyl transf... 153 2e-37
ath:AT3G12070 geranylgeranyl transferase type II beta subunit,... 150 1e-36
cpv:cgd6_1750 Rab geranylgeranyl transferase beta / prenyltran... 128 1e-29
tgo:TGME49_116270 geranylgeranyl transferase type II beta subu... 120 2e-27
bbo:BBOV_I004600 19.m02085; geranylgeranyl transferase type II... 119 6e-27
pfa:PFF0120w geranylgeranyltransferase, putative (EC:2.5.1.-);... 112 4e-25
tpv:TP03_0500 geranylgeranyl transferase type 2 subunit beta (... 109 4e-24
tgo:TGME49_000370 protein farnesyltranstransferase beta subuni... 80.1 4e-15
cel:Y48E1B.3 hypothetical protein; K11713 geranylgeranyl trans... 77.0 3e-14
dre:570808 pggt1b, MGC114070, zgc:114070; protein geranylgeran... 76.3 4e-14
dre:323500 fntb, wu:fb99h09, zgc:86774; farnesyltransferase, C... 75.1 1e-13
hsa:5229 PGGT1B, BGGI, GGTI; protein geranylgeranyltransferase... 72.4 6e-13
mmu:225467 Pggt1b, 2010207C17Rik, 2610100E13, AI451237, AI5510... 72.4 7e-13
xla:734580 pggt1b, MGC115505; protein geranylgeranyltransferas... 72.0 8e-13
xla:414563 hypothetical protein MGC81402 72.0 8e-13
ath:AT2G39550 PGGT-I; PGGT-I; CAAX-protein geranylgeranyltrans... 70.9 2e-12
bbo:BBOV_III004550 17.m07408; prenyltransferase and squalene o... 70.5 3e-12
sce:YDL090C RAM1, DPR1, FUS8, SCG2, SGP2, STE16; Beta subunit ... 69.3 6e-12
hsa:100529261 CHURC1-FNTB, FLJ58825, FLJ59570; CHURC1-FNTB rea... 69.3 6e-12
hsa:2342 FNTB, FPTB, MGC31935; farnesyltransferase, CAAX box, ... 68.9 8e-12
mmu:110606 Fntb, 2010013E13Rik, AA409500; farnesyltransferase,... 67.4 2e-11
mmu:639541 protein farnesyltransferase subunit beta-like 67.0 3e-11
cpv:cgd1_1980 protein geranyl-geranyltransferase beta subunit 66.6 4e-11
xla:447605 fntb, MGC85220, fptb; farnesyltransferase, CAAX box... 66.6 4e-11
tgo:TGME49_078230 geranylgeranyl transferase type II beta subu... 64.7 1e-10
tpv:TP02_0810 farnesyltransferase subunit beta; K05954 protein... 61.6 1e-09
bbo:BBOV_IV001440 21.m02925; Rab geranylgeranyltransferase, be... 61.6 1e-09
cpv:cgd3_2350 possible RAB geranylgeranyl transferase, b subun... 57.0 3e-08
cel:F23B12.6 tag-114; Temporarily Assigned Gene name family me... 56.2 5e-08
tpv:TP01_0171 geranylgeranyl transferase type 2 beta subunit 54.7 1e-07
sce:YGL155W CDC43, CAL1; Beta subunit of geranylgeranyltransfe... 50.1 3e-06
ath:AT5G40280 ERA1; ERA1 (ENHANCED RESPONSE TO ABA 1); farnesy... 42.0 0.001
pfa:PFL0692c geranylgeranyl transferase type2 beta subunit, pu... 40.4 0.003
pfa:PF11_0483 farnesyltransferase beta subunit, putative; K059... 40.4 0.003
xla:399396 nedd4l, nedd4, nedd4-2; neural precursor cell expre... 30.4 2.8
dre:568845 si:ch211-12m10.1 30.0 4.0
hsa:55036 CCDC40, FLJ20753, FLJ32021, KIAA1640; coiled-coil do... 29.3 6.7
> dre:406386 rabggtb, wu:fj12b07, zgc:56443; Rab geranylgeranyltransferase,
beta subunit (EC:2.5.1.60); K05956 geranylgeranyl
transferase type-2 subunit beta [EC:2.5.1.60]
Length=331
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 109/166 (65%), Gaps = 35/166 (21%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
LS+ GQLH+++ D LGWWL ERQ+ SGGLNGRPEKLPD+CYSWWVL+SL IIGR+HWI+K
Sbjct 201 LSVTGQLHQVNADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRIHWIDK 260
Query 62 RKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDYGQDLEVPAAADAAST 121
KL FILACQD ETGGFADRPG+MVDPFHT+FG+AGLSLL
Sbjct 261 AKLRNFILACQDEETGGFADRPGDMVDPFHTLFGVAGLSLLG------------------ 302
Query 122 SMDVADETSDKIDVNKISEFIRKVNPVFCMLDSVIERRAIHIQRLS 167
E I+ VNPVFCM + V++R + LS
Sbjct 303 -----------------DEQIKPVNPVFCMPEDVLQRIGLQPDLLS 331
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
LS+ ++ IDVD++ ++ Q G G D +S+ +++LA++G+L IN
Sbjct 105 LSLYDSVNAIDVDKVVEYVKGLQQEDGSFAGDKWGEIDTRFSFCAVATLALLGKLDVINV 164
Query 62 RKLLQFILACQDPETGGFADRPGN 85
K ++F+++C + + GGF RPG+
Sbjct 165 DKAVEFVMSCMNFD-GGFGCRPGS 187
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
+ + GQL R++ +++ ++ Q GG++ P L Y+ + L++ ++ I+
Sbjct 57 MDLMGQLSRMNREEIIEFIKSCQHDCGGISASIGHDPHLLYTLSAIQILSLYDSVNAIDV 116
Query 62 RKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
K+++++ Q E G FA +D + +A L+LL
Sbjct 117 DKVVEYVKGLQQ-EDGSFAGDKWGEIDTRFSFCAVATLALL 156
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 52/100 (52%), Gaps = 26/100 (26%)
Query 44 WWVLSSLAIIGRLHWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLS 103
+W L+ + ++G+L +N+ ++++FI +CQ + GG + G+ DP H ++ ++ + +LS
Sbjct 51 YWGLTVMDLMGQLSRMNREEIIEFIKSCQH-DCGGISASIGH--DP-HLLYTLSAIQILS 106
Query 104 HDYGQDLEVPAAADAASTSMDVADETSDKIDVNKISEFIR 143
++ + IDV+K+ E+++
Sbjct 107 ----------------------LYDSVNAIDVDKVVEYVK 124
> hsa:5876 RABGGTB, GGTB; Rab geranylgeranyltransferase, beta
subunit (EC:2.5.1.60); K05956 geranylgeranyl transferase type-2
subunit beta [EC:2.5.1.60]
Length=331
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 109/166 (65%), Gaps = 35/166 (21%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
L+I QLH+++ D LGWWL ERQ+ SGGLNGRPEKLPD+CYSWWVL+SL IIGRLHWI++
Sbjct 201 LAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDR 260
Query 62 RKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDYGQDLEVPAAADAAST 121
KL FILACQD ETGGFADRPG+MVDPFHT+FGIAGLSLL
Sbjct 261 EKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGE----------------- 303
Query 122 SMDVADETSDKIDVNKISEFIRKVNPVFCMLDSVIERRAIHIQRLS 167
E I+ VNPVFCM + V++R + + +S
Sbjct 304 ------------------EQIKPVNPVFCMPEEVLQRVNVQPELVS 331
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
L++ ++ IDV+++ ++ Q G G D +S+ +++LA++G+L IN
Sbjct 105 LTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINV 164
Query 62 RKLLQFILACQDPETGGFADRPGN 85
K ++F+L+C + + GGF RPG+
Sbjct 165 EKAIEFVLSCMNFD-GGFGCRPGS 187
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 26/100 (26%)
Query 44 WWVLSSLAIIGRLHWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLS 103
+W L+ + ++G+LH +N+ ++L FI +CQ E GG + G+ DP H ++ ++ + +L+
Sbjct 51 YWGLTVMDLMGQLHRMNREEILAFIKSCQH-ECGGISASIGH--DP-HLLYTLSAVQILT 106
Query 104 HDYGQDLEVPAAADAASTSMDVADETSDKIDVNKISEFIR 143
S++V IDVNK+ E+++
Sbjct 107 ---------------LYDSINV-------IDVNKVVEYVK 124
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
+ + GQLHR++ +++ ++ Q GG++ P L Y+ + L + ++ I+
Sbjct 57 MDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDV 116
Query 62 RKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
K+++++ Q E G FA +D + +A L+LL
Sbjct 117 NKVVEYVKGLQK-EDGSFAGDIWGEIDTRFSFCAVATLALL 156
> xla:734339 rabggtb, MGC85147; Rab geranylgeranyltransferase,
beta subunit (EC:2.5.1.60); K05956 geranylgeranyl transferase
type-2 subunit beta [EC:2.5.1.60]
Length=331
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 109/166 (65%), Gaps = 35/166 (21%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
L+I QLH+++ D LGWWL ERQ+ SGGLNGRPEKLPD+CYSWWVL+SL IIGRLHWI++
Sbjct 201 LAITDQLHQVNADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDR 260
Query 62 RKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDYGQDLEVPAAADAAST 121
KL F+LACQD ETGGFADRPG+MVDPFHT+FGIAGLSLL
Sbjct 261 EKLRLFVLACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGE----------------- 303
Query 122 SMDVADETSDKIDVNKISEFIRKVNPVFCMLDSVIERRAIHIQRLS 167
E I+ VNPVFCM + +++R I + +S
Sbjct 304 ------------------ERIKPVNPVFCMPEEILQRINIQPELVS 331
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
L++ L +D +++ ++ Q G G D +S+ +++LA++GRL +N
Sbjct 105 LTLYDSLSTVDSNKIVDYVQSLQKEDGSFAGDKWGEIDTRFSFCAVATLALLGRLDAVNI 164
Query 62 RKLLQFILACQDPETGGFADRPGN 85
K ++F+L+C + + GGF RPG+
Sbjct 165 EKAIEFVLSCMNFD-GGFGCRPGS 187
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query 44 WWVLSSLAIIGRLHWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLS 103
+W L+ + ++G L +NK ++L FI +CQ + GGF+ G+ DP H ++ ++ + +L+
Sbjct 51 YWGLTVMDLMGELQRMNKEEILAFIKSCQH-DCGGFSASIGH--DP-HLLYTLSAVQILT 106
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
+ + G+L R++ +++ ++ Q GG + P L Y+ + L + L ++
Sbjct 57 MDLMGELQRMNKEEILAFIKSCQHDCGGFSASIGHDPHLLYTLSAVQILTLYDSLSTVDS 116
Query 62 RKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
K++ ++ + Q E G FA +D + +A L+LL
Sbjct 117 NKIVDYVQSLQK-EDGSFAGDKWGEIDTRFSFCAVATLALL 156
> mmu:19352 Rabggtb; RAB geranylgeranyl transferase, b subunit
(EC:2.5.1.60); K05956 geranylgeranyl transferase type-2 subunit
beta [EC:2.5.1.60]
Length=331
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 109/166 (65%), Gaps = 35/166 (21%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
L+I QLH+++ D LGWWL ERQ+ SGGLNGRPEKLPD+CYSWWVL+SL IIGRLHWI++
Sbjct 201 LAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDR 260
Query 62 RKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDYGQDLEVPAAADAAST 121
KL FILACQD ETGGFADRPG+MVDPFHT+FGIAGLSLL
Sbjct 261 EKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLG------------------ 302
Query 122 SMDVADETSDKIDVNKISEFIRKVNPVFCMLDSVIERRAIHIQRLS 167
E I+ V+PVFCM + V++R + + +S
Sbjct 303 -----------------EEQIKPVSPVFCMPEEVLQRVNVQPELVS 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
L++ +H I+VD++ ++ Q G G D +S+ +++LA++G+L IN
Sbjct 105 LTLYDSVHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINV 164
Query 62 RKLLQFILACQDPETGGFADRPGN 85
K ++F+L+C + + GGF RPG+
Sbjct 165 EKAIEFVLSCMNFD-GGFGCRPGS 187
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
+ + GQLHR++ +++ ++ Q GG++ P L Y+ + L + +H IN
Sbjct 57 MDLMGQLHRMNREEILVFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSVHVINV 116
Query 62 RKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
K++ ++ + Q E G FA +D + +A L+LL
Sbjct 117 DKVVAYVQSLQK-EDGSFAGDIWGEIDTRFSFCAVATLALL 156
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Query 44 WWVLSSLAIIGRLHWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLS 103
+W L+ + ++G+LH +N+ ++L FI +CQ E GG + G+ DP H ++ ++ + +L+
Sbjct 51 YWGLTVMDLMGQLHRMNREEILVFIKSCQH-ECGGISASIGH--DP-HLLYTLSAVQILT 106
> ath:AT5G12210 geranylgeranyl transferase type II beta subunit,
putative / RAB geranylgeranyltransferase beta subunit, putative;
K05956 geranylgeranyl transferase type-2 subunit beta
[EC:2.5.1.60]
Length=321
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 84/104 (80%), Gaps = 0/104 (0%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWIN 60
+L+I G LH +D D LGWWL ERQ+ +GGLNGRPEKL D+CYSWWVLSSL +I R+HWI+
Sbjct 194 ALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLSSLIMIDRVHWID 253
Query 61 KRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSH 104
K KL++FIL CQD + GG +DRP + VD FHT FG+AGLSLL +
Sbjct 254 KAKLVKFILDCQDLDNGGISDRPEDAVDIFHTYFGVAGLSLLEY 297
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query 19 WLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINKRKLLQFILACQDPETGG 78
WL Q SGG G P + Y+ + LA+ +++ ++ K+ ++ Q+ E G
Sbjct 68 WLMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQN-EDGS 126
Query 79 FADRPGNMVDPFHTVFGIAGLSLL 102
F+ +D + I LS+L
Sbjct 127 FSGDMWGEIDTRFSYIAICCLSIL 150
> sce:YPR176C BET2; Bet2p (EC:2.5.1.60); K05956 geranylgeranyl
transferase type-2 subunit beta [EC:2.5.1.60]
Length=325
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 84/108 (77%), Gaps = 3/108 (2%)
Query 1 SLSIAGQLHRIDVDQL---GWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLH 57
+L+IA +L + DQL GWWL ERQ+ GGLNGRP KLPD+CYSWWVLSSLAIIGRL
Sbjct 193 ALAIANKLDMLSDDQLEEIGWWLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLAIIGRLD 252
Query 58 WINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHD 105
WIN KL +FIL CQD + GG +DRP N VD FHTVFG+AGLSL+ +D
Sbjct 253 WINYEKLTEFILKCQDEKKGGISDRPENEVDVFHTVFGVAGLSLMGYD 300
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 0/40 (0%)
Query 44 WWVLSSLAIIGRLHWINKRKLLQFILACQDPETGGFADRP 83
+W L++L ++ K +++ F+L+C D + G FA P
Sbjct 40 YWGLTALCVLDSPETFVKEEVISFVLSCWDDKYGAFAPFP 79
> cel:B0280.1 hypothetical protein; K05956 geranylgeranyl transferase
type-2 subunit beta [EC:2.5.1.60]
Length=335
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 84/105 (80%), Gaps = 0/105 (0%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWIN 60
+L+IAG+L ID D+ WLA RQ SGGLNGRPEKLPD+CYSWWVL+SLAI+GRL++I+
Sbjct 206 ALAIAGRLDEIDRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWVLASLAILGRLNFID 265
Query 61 KRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHD 105
+ +FI ACQD ETGGFADRPG+ DPFHTVFGIA LSL D
Sbjct 266 SDAMKKFIYACQDDETGGFADRPGDCADPFHTVFGIAALSLFGDD 310
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/60 (18%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query 44 WWVLSSLAIIGRLHWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLS 103
+W ++++ + +L ++ +++ ++L C++ + GG+ PG+ HT+ + L + +
Sbjct 57 YWCVNAMDLSKQLERMSTEEIVNYVLGCRNTD-GGYGPAPGHDSHLLHTLCAVQTLIIFN 115
> ath:AT3G12070 geranylgeranyl transferase type II beta subunit,
putative / RAB geranylgeranyltransferase beta subunit, putative;
K05956 geranylgeranyl transferase type-2 subunit beta
[EC:2.5.1.60]
Length=317
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/105 (66%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQ-MASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWI 59
+L+I G LHR+D D LGWWL ERQ SGGLNGRPEKLPD+CYSWWVLSSL +I R+HWI
Sbjct 189 ALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWI 248
Query 60 NKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSH 104
K KL++FIL QD + GG +DRP VD FHT FG+AGLSLL +
Sbjct 249 EKAKLVKFILDSQDMDNGGISDRPSYTVDIFHTYFGVAGLSLLEY 293
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWIN 60
+L++ +L + D++ W+ Q SGG G P + Y+ + LA+ +L+ ++
Sbjct 45 TLALLDKLGSVSEDEVVSWVMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILD 104
Query 61 KRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
K+ +I Q+ E G F+ VD + I LS+L
Sbjct 105 VEKVSNYIAGLQN-EDGSFSGDIWGEVDTRFSYIAICCLSIL 145
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Query 43 SWWVLSSLAIIGRLHWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
++W L++LA++ +L +++ +++ +++ CQ E+GGFA G+ DP H ++ ++ + +L
Sbjct 39 AYWGLTTLALLDKLGSVSEDEVVSWVMTCQH-ESGGFAGNTGH--DP-HVLYTLSAVQIL 94
Query 103 S 103
+
Sbjct 95 A 95
> cpv:cgd6_1750 Rab geranylgeranyl transferase beta / prenyltransferase;
alpha/alpha toroid fold ; K05956 geranylgeranyl transferase
type-2 subunit beta [EC:2.5.1.60]
Length=330
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 78/116 (67%), Gaps = 0/116 (0%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWIN 60
SL++ L I++D+L +WL ERQ+ GG NGRPEK PD+CYSWW+ S L +GR ++I+
Sbjct 205 SLALLNSLDIINIDRLAFWLCERQLLCGGFNGRPEKAPDVCYSWWIFSLLYFLGRANYID 264
Query 61 KRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDYGQDLEVPAAA 116
K L ++I +D GGF+DRPGN+ D FHT FGI+ LSL+ D ++ P A
Sbjct 265 KNLLEEYIFCSEDISKGGFSDRPGNVSDVFHTFFGISALSLIRFDAIDNIISPIFA 320
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINK 61
L + G+L + D ++ W++ Q G D +S+ LSSL I+ R++ I+
Sbjct 110 LIMIGKLDQADSAKISKWISSLQNKDGSFRCDQYLETDCRFSYCALSSLTILNRINEIDI 169
Query 62 RKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLS 103
++L C + + G F P + +T + L+LL+
Sbjct 170 IGARSYLLRCYNSD-GAFGGVPCSESHAAYTYCCVVSLALLN 210
> tgo:TGME49_116270 geranylgeranyl transferase type II beta subunit,
putative (EC:2.5.1.60); K05956 geranylgeranyl transferase
type-2 subunit beta [EC:2.5.1.60]
Length=287
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 73/102 (71%), Gaps = 0/102 (0%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWIN 60
+L++ L +D +QL WL ERQ+ GG NGRPEK PD+CYS+W+L+SL I+G + W++
Sbjct 154 ALALCESLGCVDKEQLALWLIERQVEGGGFNGRPEKAPDVCYSFWILASLCILGYMDWVD 213
Query 61 KRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
+ L +FIL QD E GG ADRPG++ D FHT FG A LSL+
Sbjct 214 TKGLTEFILQAQDEEDGGIADRPGDVSDVFHTYFGTAALSLM 255
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query 7 QLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINKRKLLQ 66
+LH +D D++ W+ Q +GG G D +++ ++SL +IG+L
Sbjct 64 KLHLVDTDKVAAWVKSLQTPAGGFKGDEWGECDTRFAYCGVASLTLIGQLDRKTAEGTAL 123
Query 67 FILACQDPETGGFADRPGNMVDPFHTVFGIAGLSL 101
++ C++ + GGF PG +A L+L
Sbjct 124 YVQRCRNSD-GGFGWIPGGESHAASVFCCLAALAL 157
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 16/173 (9%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWIN 60
SL++ GQL R + ++ + + GG P + L++LA+ L ++
Sbjct 106 SLTLIGQLDRKTAEGTALYVQRCRNSDGGFGWIPGGESHAASVFCCLAALALCESLGCVD 165
Query 61 KRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSH-DY------------G 107
K +L +++ Q E GGF RP D ++ + +A L +L + D+
Sbjct 166 KEQLALWLIERQ-VEGGGFNGRPEKAPDVCYSFWILASLCILGYMDWVDTKGLTEFILQA 224
Query 108 QDLEVPAAADAASTSMDVADET--SDKIDVNKISEFIRKVNPVFCMLDSVIER 158
QD E AD DV + + + + I KV+PV + V+ R
Sbjct 225 QDEEDGGIADRPGDVSDVFHTYFGTAALSLMQTVPGIHKVHPVLSLPCDVVRR 277
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query 19 WLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINKRKLLQFILACQDPETGG 78
W+ Q +GG P + P + + + L L + +LH ++ K+ ++ + Q P GG
Sbjct 28 WVLSSQHHAGGFAQGPGQDPHITSTHYALLLLVGMNKLHLVDTDKVAAWVKSLQTP-AGG 86
Query 79 FADRPGNMVDPFHTVFGIAGLSLLSH 104
F D G+A L+L+
Sbjct 87 FKGDEWGECDTRFAYCGVASLTLIGQ 112
> bbo:BBOV_I004600 19.m02085; geranylgeranyl transferase type
II beta subunit; K05956 geranylgeranyl transferase type-2 subunit
beta [EC:2.5.1.60]
Length=329
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWIN 60
+LS G LH +D LG WL+ERQ GG NGR EK PD+CYSWWV+S+L IGR W +
Sbjct 198 ALSELGALHLVDTTALGIWLSERQTPGGGCNGRAEKAPDICYSWWVISALTNIGRSAWFD 257
Query 61 KRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDYGQDLEVPAAADAAS 120
K KL +FI Q+ + GG A PG + D FHT F +A LSL+ H G LE P A A+
Sbjct 258 KTKLTEFICRSQNRDDGGIAYFPGYIGDVFHTFFALAALSLIDHK-GFGLE-PIHARYAT 315
Query 121 TS 122
TS
Sbjct 316 TS 317
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWIN 60
SL++ G+ ID + +++ Q G N D + + + L+++G L I+
Sbjct 102 SLALLGKQDVIDKECTIKYVSGLQNRDGSFNSDHFGEADARHVYSGVICLSVLGGLDTID 161
Query 61 KRKLLQFILACQDPETGGFADRP 83
K + F+L CQ+P GGF P
Sbjct 162 MSKTVDFLLNCQNPN-GGFGWYP 183
> pfa:PFF0120w geranylgeranyltransferase, putative (EC:2.5.1.-);
K05956 geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Length=379
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 0/102 (0%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWIN 60
+L + +L+ I+ ++L WL+ RQ +GG NGR EKL D CYSWW+ S+L ++ + +WIN
Sbjct 239 TLFLIQKLYLINENKLAHWLSLRQTTNGGFNGRAEKLTDTCYSWWIFSTLIVLKKYNWIN 298
Query 61 KRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
K L +IL CQD E GG +D P + D HT FG+A LSL+
Sbjct 299 KNALKNYILLCQDIEKGGISDNPDCLPDICHTFFGLAALSLI 340
> tpv:TP03_0500 geranylgeranyl transferase type 2 subunit beta
(EC:2.5.1.-); K05956 geranylgeranyl transferase type-2 subunit
beta [EC:2.5.1.60]
Length=345
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
Query 8 LHRIDVDQLGWWLAERQMA-SGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINKRKLLQ 66
L ID D+LG+WL+ERQ GGLNGRPEK D+CYSWW+LS L IGRL W+N +L++
Sbjct 215 LSLIDSDKLGFWLSERQTTVDGGLNGRPEKKSDICYSWWILSVLCNIGRLDWVNHDQLVE 274
Query 67 FILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL-SHDYGQDLEVPAAADAAST 121
FI+ Q GG A PG M D HT F + G+SL+ S Y P A T
Sbjct 275 FIIESQSQSDGGIAYFPGYMGDVCHTFFALCGISLIDSQRYNLTQIHPVYATTLET 330
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query 43 SWWVLSSLAIIGRLHWINKRKLLQFILACQDPETGGFADRPGN---MVDPFHTVFGIAGL 99
S+ L L+++ L+ I+ RK + FIL+C++ + GGFA +P N F + +A L
Sbjct 154 SYSALVCLSLLAGLNNIDLRKAVDFILSCRNFD-GGFAWQPMNESHAAACFCCIGALAEL 212
Query 100 SLLS 103
LLS
Sbjct 213 DLLS 216
> tgo:TGME49_000370 protein farnesyltranstransferase beta subunit,
putative (EC:2.5.1.58); K05954 protein farnesyltransferase
subunit beta [EC:2.5.1.58]
Length=638
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 64/118 (54%), Gaps = 15/118 (12%)
Query 1 SLSIAGQLHR-IDVDQLGWWLAERQMA-SGGLNGRPEKLPDLCYSWWVLSSLAI------ 52
+L I G+ H +D+D+L W RQM GG GR KL D CYS+W+ + +
Sbjct 414 ALCILGKAHEFLDLDRLLHWAVMRQMGFEGGFQGRTNKLVDSCYSFWMSALFPLLAHAFH 473
Query 53 -----IGRLHWINKRKLLQFILA-CQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSH 104
I R W + R L Q+ILA CQDP GG D+PG D +HT + ++GLS+ H
Sbjct 474 LAGHRIPRELWASSRHLQQYILACCQDPR-GGLRDKPGKAADLYHTCYALSGLSVAQH 530
> cel:Y48E1B.3 hypothetical protein; K11713 geranylgeranyl transferase
type-1 subunit beta [EC:2.5.1.59]
Length=360
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query 8 LHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINKRKLLQF 67
L R D+D+L W ++Q G +GR K D CY++W+ ++L I+ H ++K+ L +F
Sbjct 238 LTRRDIDRLIRWAIQKQDI--GFHGRAHKPDDSCYAFWIGATLKILNAYHLVSKQHLREF 295
Query 68 ILACQDPETGGFAD--RPGNMVDPFHTVFGIAGLSLL 102
++ CQ P GGF PG D HT F IA LSLL
Sbjct 296 LMICQHPHIGGFCKYPEPGGYSDILHTYFSIAALSLL 332
> dre:570808 pggt1b, MGC114070, zgc:114070; protein geranylgeranyltransferase
type I, beta subunit (EC:2.5.1.59); K11713 geranylgeranyl
transferase type-1 subunit beta [EC:2.5.1.59]
Length=355
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query 1 SLSIAGQLHRI----DVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRL 56
SL + G+L + ++ +L W RQ G GRP K D CYS+WV ++L ++
Sbjct 218 SLCMMGKLREVFSERELGRLRRWCVLRQ--QNGFQGRPNKPVDTCYSFWVGATLQLLDVF 275
Query 57 HWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
+ N K +IL+ QD GGFA P + DP HT FGI GLSL+
Sbjct 276 QYTNFEKNRNYILSTQDRLVGGFAKWPDSHPDPLHTYFGICGLSLM 321
> dre:323500 fntb, wu:fb99h09, zgc:86774; farnesyltransferase,
CAAX box, beta (EC:2.5.1.-); K05954 protein farnesyltransferase
subunit beta [EC:2.5.1.58]
Length=419
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 35/183 (19%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMA-SGGLNGRPEKLPDLCYSWWVLSSLAIIGRL--- 56
+L I G+ H +D+ L W+ RQM GG GR KL D CYS+W L ++ R
Sbjct 243 ALVILGKEHMLDLKALLRWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALFK 302
Query 57 ---------HWINKRKLLQ--FILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHD 105
W+ +RK LQ +L CQ+P GG D+PG D +HT + ++GLS+ H
Sbjct 303 EGDSTLSVSSWMFERKALQEYILLCCQNP-GGGLLDKPGKSRDFYHTSYCLSGLSVAQHF 361
Query 106 YGQDLEVPAAADAASTSMDVADETSDKIDVNKISEFIRKVNPVFCMLDSVIERRAIHIQR 165
+DL +E D NK++ +PV+ + + R + R
Sbjct 362 GNKDLH---------------NELILGRDENKLA----PTHPVYNICPEKVARAVEYFHR 402
Query 166 LSV 168
L V
Sbjct 403 LPV 405
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query 19 WLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINKRKLLQFILACQDPETGG 78
W+ Q GGL G P Y++ ++L I+G+ H ++ + LL+++ + Q GG
Sbjct 213 WIISCQNWEGGLGGVPGLEAHGGYTFCGTAALVILGKEHMLDLKALLRWVTSRQMRFEGG 272
Query 79 FADRPGNMVDPFHTVFGIAGLSLLSH 104
F R +VD ++ F AGL L H
Sbjct 273 FQGRCNKLVDGCYS-FWQAGLLPLLH 297
> hsa:5229 PGGT1B, BGGI, GGTI; protein geranylgeranyltransferase
type I, beta subunit (EC:2.5.1.59); K11713 geranylgeranyl
transferase type-1 subunit beta [EC:2.5.1.59]
Length=377
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query 1 SLSIAGQLHRI----DVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRL 56
SL + G+L + +++++ W RQ G +GRP K D CYS+WV ++L ++
Sbjct 229 SLCLMGKLEEVFSEKELNRIKRWCIMRQQ--NGYHGRPNKPVDTCYSFWVGATLKLLKIF 286
Query 57 HWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
+ N K +IL+ QD GGFA P + D H FGI GLSL+
Sbjct 287 QYTNFEKNRNYILSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLM 332
> mmu:225467 Pggt1b, 2010207C17Rik, 2610100E13, AI451237, AI551093,
BGG1, GGT1; protein geranylgeranyltransferase type I,
beta subunit (EC:2.5.1.59); K11713 geranylgeranyl transferase
type-1 subunit beta [EC:2.5.1.59]
Length=377
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query 1 SLSIAGQLHRI----DVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRL 56
SL + G+L + +++++ W RQ G +GRP K D CYS+WV ++L ++
Sbjct 229 SLCLMGKLEEVFSEKELNRIKRWCIMRQQ--NGYHGRPNKPVDTCYSFWVGATLKLLKIF 286
Query 57 HWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
+ N K +IL+ QD GGFA P + D H FGI GLSL+
Sbjct 287 QYTNFEKNRNYILSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLM 332
> xla:734580 pggt1b, MGC115505; protein geranylgeranyltransferase
type I, beta subunit (EC:2.5.1.59); K11713 geranylgeranyl
transferase type-1 subunit beta [EC:2.5.1.59]
Length=372
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query 1 SLSIAGQLHRI----DVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRL 56
SL + G+L + +++++ W RQ G +GRP K D CYS+WV ++L ++
Sbjct 224 SLCLMGKLEEVFSEKELNRMRRWCILRQ--QNGFHGRPNKPVDTCYSFWVGATLMLLDIF 281
Query 57 HWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
+ N K FIL+ QD GGFA P + D H FGI GLSL+
Sbjct 282 KYTNFEKNRNFILSTQDRIVGGFAKWPDSHPDALHAYFGICGLSLI 327
> xla:414563 hypothetical protein MGC81402
Length=324
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query 1 SLSIAGQLHRI----DVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRL 56
SL + G+L + +++++ W RQ G +GRP K D CYS+WV ++L ++
Sbjct 176 SLCLMGKLEEVFSEKELNRMRRWCIMRQ--QNGFHGRPNKPVDTCYSFWVGATLMLLDIF 233
Query 57 HWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLL 102
+ N K FIL+ QD GGFA P + D H FGI GLSL+
Sbjct 234 KYTNFEKNRNFILSTQDRIVGGFAKWPDSHPDALHAYFGICGLSLI 279
> ath:AT2G39550 PGGT-I; PGGT-I; CAAX-protein geranylgeranyltransferase/
protein heterodimerization; K11713 geranylgeranyl
transferase type-1 subunit beta [EC:2.5.1.59]
Length=375
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query 19 WLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINKRKLLQFILACQDPETGG 78
W +RQ GG GR K D CY++W+ + L +IG I+K L +F+++CQ + GG
Sbjct 271 WCLQRQANDGGFQGRTNKPSDTCYAFWIGAVLKLIGGDALIDKMALRKFLMSCQS-KYGG 329
Query 79 FADRPGNMVDPFHTVFGIAGLSLL 102
F+ PG + D +H+ +G SLL
Sbjct 330 FSKFPGQLPDLYHSYYGYTAFSLL 353
> bbo:BBOV_III004550 17.m07408; prenyltransferase and squalene
oxidase repeat family protein; K05954 protein farnesyltransferase
subunit beta [EC:2.5.1.58]
Length=495
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAI----IGRL 56
+L + L ID D+L W +RQ A G GRP KL D+CYS+W+ +LA+ I
Sbjct 372 ALKLLNSLDAIDTDRLLQWCRQRQTAELGFQGRPHKLVDVCYSFWLSGTLALLNEPINSS 431
Query 57 HWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSH 104
++ L +IL GGF D+P VD +HT + ++ + ++S
Sbjct 432 SDLSHLLLKAYILCISQNPGGGFRDKPTKPVDLYHTCYALSAMEVISQ 479
> sce:YDL090C RAM1, DPR1, FUS8, SCG2, SGP2, STE16; Beta subunit
of the CAAX farnesyltransferase (FTase) that prenylates the
A-factor mating pheromone and Ras proteins; required for the
membrane localization of Ras proteins and A-factor; homolog
of the mammalian FTase beta subunit (EC:2.5.1.58); K05954
protein farnesyltransferase subunit beta [EC:2.5.1.58]
Length=431
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASG-GLNGRPEKLPDLCYSWWVLSSLAII---GRL 56
SL+I + +I+V++L W + RQ+ G GR KL D CYS+WV S AI+ G
Sbjct 268 SLAILRSMDQINVEKLLEWSSARQLQEERGFCGRSNKLVDGCYSFWVGGSAAILEAFGYG 327
Query 57 HWINKRKLLQFIL-ACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDY 106
NK L +IL CQ+ E G D+PG D +HT + + GL++ Y
Sbjct 328 QCFNKHALRDYILYCCQEKEQPGLRDKPGAHSDFYHTNYCLLGLAVAESSY 378
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query 42 YSWWVLSSLAIIGRLHWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVF-GIAGLS 100
Y++ +SLAI+ + IN KLL++ A Q E GF R +VD ++ + G +
Sbjct 261 YTFCATASLAILRSMDQINVEKLLEWSSARQLQEERGFCGRSNKLVDGCYSFWVGGSAAI 320
Query 101 LLSHDYGQDLEVPAAAD 117
L + YGQ A D
Sbjct 321 LEAFGYGQCFNKHALRD 337
> hsa:100529261 CHURC1-FNTB, FLJ58825, FLJ59570; CHURC1-FNTB readthrough
Length=391
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMA-SGGLNGRPEKLPDLCYSWWVLSSLAIIGRL--- 56
+L I + +++ L W+ RQM GG GR KL D CYS+W L ++ R
Sbjct 212 ALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHA 271
Query 57 ---------HWINKRKLLQ-FILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDY 106
HW+ ++ LQ +IL C GG D+PG D +HT + ++GLS+ H +
Sbjct 272 QGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQH-F 330
Query 107 G-----QDLEVPAAADAASTSMDVADETSDKIDVNKISEFIRKVNPVF 149
G D+ + +A + V + DK+ + + F++K P F
Sbjct 331 GSGAMLHDVVLGVPENALQPTHPVYNIGPDKV-IQATTYFLQKPVPGF 377
> hsa:2342 FNTB, FPTB, MGC31935; farnesyltransferase, CAAX box,
beta (EC:2.5.1.58); K05954 protein farnesyltransferase subunit
beta [EC:2.5.1.58]
Length=437
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMA-SGGLNGRPEKLPDLCYSWWVLSSLAIIGRL--- 56
+L I + +++ L W+ RQM GG GR KL D CYS+W L ++ R
Sbjct 258 ALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHA 317
Query 57 ---------HWINKRKLLQ-FILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDY 106
HW+ ++ LQ +IL C GG D+PG D +HT + ++GLS+ H +
Sbjct 318 QGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQH-F 376
Query 107 G-----QDLEVPAAADAASTSMDVADETSDKIDVNKISEFIRKVNPVF 149
G D+ + +A + V + DK+ + + F++K P F
Sbjct 377 GSGAMLHDVVLGVPENALQPTHPVYNIGPDKV-IQATTYFLQKPVPGF 423
> mmu:110606 Fntb, 2010013E13Rik, AA409500; farnesyltransferase,
CAAX box, beta (EC:2.5.1.58); K05954 protein farnesyltransferase
subunit beta [EC:2.5.1.58]
Length=437
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMA-SGGLNGRPEKLPDLCYSWWVLSSLAIIGRL--- 56
+L I + +++ L W+ RQM GG GR KL D CYS+W L ++ R
Sbjct 258 ALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHA 317
Query 57 ---------HWINKRKLLQ-FILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDY 106
HW+ ++ LQ +IL C GG D+PG D +HT + ++GLS+ H +
Sbjct 318 QGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQH-F 376
Query 107 G-----QDLEVPAAADAASTSMDVADETSDKIDVNKISEFIRKVNPVF 149
G D+ + + + V + +K+ + + F++K P F
Sbjct 377 GSGAMLHDMVMGVPENVLQPTHPVYNIGPEKV-IQATTHFLQKPVPGF 423
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query 36 KLPDLCYSWWVLSSLAIIGR---LHWINKRKLLQFILACQDPETGGFADRPGNMVD 88
+ P L ++ +++L IIG + IN+ KLLQ++ + + P+ G F G VD
Sbjct 146 QYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPD-GSFLMHVGGEVD 200
> mmu:639541 protein farnesyltransferase subunit beta-like
Length=499
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMA-SGGLNGRPEKLPDLCYSWWVLSSLAIIGRL--- 56
+L I + +++ L W+ RQM GG GR KL D CYS+W L ++ R
Sbjct 320 ALVILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHA 379
Query 57 ---------HWINKRKLLQ-FILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDY 106
HW+ ++ LQ +IL C GG D+PG D +HT + ++GLS+ H +
Sbjct 380 QGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQH-F 438
Query 107 G-----QDLEVPAAADAASTSMDVADETSDKIDVNKISEFIRKVNPVF 149
G D+ + + + V + +K+ + + F++K P F
Sbjct 439 GSGAMLHDMVMGVPENVLQPTHPVYNIGPEKV-IQATTHFLQKPVPGF 485
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query 36 KLPDLCYSWWVLSSLAIIGR---LHWINKRKLLQFILACQDPETGGFADRPGNMVD 88
+ P L ++ +++L IIG IN+ KLLQ++ + + P+ G F G VD
Sbjct 208 QYPHLAPTYAAVNALCIIGTEEAYKVINREKLLQYLYSLKQPD-GSFLMHVGGEVD 262
> cpv:cgd1_1980 protein geranyl-geranyltransferase beta subunit
Length=497
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query 2 LSIAGQLHRIDVDQLGWWLAERQMA-SGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWIN 60
L I G+ ID+D L +W+ +RQ GG GR KL D CYS+W L I + I
Sbjct 282 LCILGKSSIIDIDSLLYWIVQRQSGIEGGFQGRTNKLVDSCYSFWFTGLLFCIEEILRIR 341
Query 61 K--------------RKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSL 101
+ L +IL C GG D+P D +HT + ++GLSL
Sbjct 342 TSTTESYIQSCLCDFQALASYILICCQLSEGGLIDKPKKPRDLYHTCYALSGLSL 396
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query 24 QMASGGLNGRPEKLPDLCYSWWVLSSLAIIG---RLHWINKRKLLQFILACQDPETGGFA 80
Q SGG G +P+L ++ +SS+ I G L I++ K+ QF +D ETGGF
Sbjct 156 QDESGGFGGNFSHMPNLVSTYLAVSSIIITGDTEALLKIDRFKMYQFFKKLRDFETGGFK 215
Query 81 DRPGNMVD--PFHTVFGIAGL 99
+ VD F+ V +A +
Sbjct 216 IQLDGEVDVRAFYCVSAVASM 236
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query 42 YSWWVLSSLAIIGRLHWINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGL 99
Y++ V+S L I+G+ I+ LL +I+ Q GGF R +VD ++ F GL
Sbjct 274 YTYCVVSGLCILGKSSIIDIDSLLYWIVQRQSGIEGGFQGRTNKLVDSCYS-FWFTGL 330
> xla:447605 fntb, MGC85220, fptb; farnesyltransferase, CAAX box,
beta; K05954 protein farnesyltransferase subunit beta [EC:2.5.1.58]
Length=414
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMA-SGGLNGRPEKLPDLCYSWWVLSSLAIIGR-LH- 57
+L I ++ +D+ L W+ RQM GG GR KL D CYS+W L ++ R LH
Sbjct 243 ALVILQRVQLLDLRSLLRWVTCRQMRFEGGFQGRCNKLVDGCYSFWQGGLLPLLHRTLHA 302
Query 58 ----------WI-NKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSH-- 104
W+ +++ L ++IL C +GG D+PG D +HT + ++GLS+ H
Sbjct 303 EGDSAISLGNWMFDEQALQEYILLCCQCPSGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG 362
Query 105 --DYGQDLEVPAAADAASTSMDVADETSDKIDVNKISEFIRKVNP 147
D ++ V A + + V + DK+ + F++K P
Sbjct 363 SGDILHEVIVGVAENRLQPTHPVYNIGPDKV-AQAVVHFMKKAVP 406
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query 38 PDLCYSWWVLSSLAIIGRLHWIN-KRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGI 96
P +CY W++ S+A++ L + + QF++ CQDP GGF PG T +
Sbjct 86 PWICY--WIVHSMALLDELIPESLASDVCQFLIHCQDP-NGGFCGGPGQQPHLAPTFAAV 142
Query 97 AGLSLLSHD 105
L + D
Sbjct 143 NALCTIGTD 151
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query 19 WLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIG---RLHWINKRKLLQFILACQDPE 75
+L Q +GG G P + P L ++ +++L IG IN+ KLL F+ + + +
Sbjct 114 FLIHCQDPNGGFCGGPGQQPHLAPTFAAVNALCTIGTDETFDVINREKLLAFLWSLKQAD 173
Query 76 TGGFADRPGNMVD 88
G F G VD
Sbjct 174 -GSFTMHIGGEVD 185
> tgo:TGME49_078230 geranylgeranyl transferase type II beta subunit,
putative (EC:2.5.1.60)
Length=539
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 12/130 (9%)
Query 19 WLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGR--LHWINKRKLLQFILACQDPET 76
WL RQ+ GGLNGRP K D CY WW+L++ I+G + + L QF+L+CQ ET
Sbjct 384 WLGARQLPGGGLNGRPGKSADSCYCWWILATANILGMDLASVYDTQTLKQFVLSCQ-AET 442
Query 77 GGFADRPGNMVDPFHTVFGIAGLSLLSHDY---GQDLEVPAAADAASTSMDVADETSDKI 133
GG + P T G + +H+ D + A++ S+ V ++ S
Sbjct 443 GGISRV------PIKTPSSGCGTVVAAHESPGNQNDTAREEVSVASAASLKVQEDKSRNQ 496
Query 134 DVNKISEFIR 143
N++ F++
Sbjct 497 VENQLRPFLK 506
> tpv:TP02_0810 farnesyltransferase subunit beta; K05954 protein
farnesyltransferase subunit beta [EC:2.5.1.58]
Length=539
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 19/129 (14%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLH--- 57
S +++ +++D+ ++ W R G GRP KL D CYS+WV SS+ II +L
Sbjct 405 SDTVSNVKNKLDLMKVYEWCVNRLTPQFGFQGRPHKLVDSCYSFWVGSSILIIEQLFNQL 464
Query 58 ----------WINK--RKLLQFILACQ---DPETG-GFADRPGNMVDPFHTVFGIAGLSL 101
+ N+ RKL + +L C +TG GF D+PG D +HT + ++ L+L
Sbjct 465 DKFYGQNDTTFYNRGDRKLYEELLKCYLLVVAQTGKGFRDKPGKPSDLYHTCYSLSYLNL 524
Query 102 LSHDYGQDL 110
+ ++ D+
Sbjct 525 IDNNLPHDI 533
> bbo:BBOV_IV001440 21.m02925; Rab geranylgeranyltransferase,
beta subunit (EC:2.5.1.60); K05956 geranylgeranyl transferase
type-2 subunit beta [EC:2.5.1.60]
Length=457
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 12/104 (11%)
Query 15 QLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRL----HWINKRKLLQFILA 70
+L WL +R A GG++GR K D+CYS+W+L++L+++ + + R++++FI
Sbjct 346 KLKSWLLKRLTAFGGVSGRVGKAEDVCYSFWLLATLSLLNKFGVNSQILRGREMIRFIER 405
Query 71 CQDPETGGFA------DRPGNMVDPFHTVFGIAGLSLLSHDYGQ 108
CQ +GG A PGN DPFH+ + ++L+ + Q
Sbjct 406 CQ-TSSGGIAPYPCDEGEPGN-PDPFHSFAALLTITLIEEERQQ 447
> cpv:cgd3_2350 possible RAB geranylgeranyl transferase, b subunit1,
pernyltransferase
Length=395
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query 11 IDVDQLGWWLAERQMASGG----------LNGRPEKLPDLCYSWWVLSSLAIIGRLHWIN 60
+ ++L WL +R +AS NGR K D+CYSWWV +SL I+ + IN
Sbjct 234 FNFNRLNRWLLKRIIASESHENTKYQSYCFNGRIGKKCDVCYSWWVFASLKIVKNIT-IN 292
Query 61 K-------------RKLLQFILACQDPETGGFADRPGNM-----VDPFHTVFGIAGLSLL 102
+ + L+ IL Q+ GGF P N DP HT I+ LSL+
Sbjct 293 RNIDCSSIINSKILKILINGILCHQNNIYGGFQKSPFNTDNKGHSDPLHTFLSISALSLI 352
> cel:F23B12.6 tag-114; Temporarily Assigned Gene name family
member (tag-114); K05954 protein farnesyltransferase subunit
beta [EC:2.5.1.58]
Length=401
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMA-SGGLNGRPEKLPDLCYSWWVLSSLAII-GRLH- 57
SL + + D++ L W RQM GG GR KL D CYS+W + ++ G +
Sbjct 246 SLVLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGCYSFWQGAIFPLLDGEMER 305
Query 58 --------WINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSL 101
R L ++IL GGF D+P VD +HT + ++GLS+
Sbjct 306 EGRSLEKGLFEARMLEEYILVGCQSVHGGFKDKPDKPVDLYHTCYVLSGLSV 357
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 0/84 (0%)
Query 19 WLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINKRKLLQFILACQDPETGG 78
W+ Q GG G P Y++ ++SL ++ R + LL++ Q GG
Sbjct 216 WIISCQSFEGGFGGEPYTEAHGGYTFCAVASLVLLNRFRLADMEGLLRWATRRQMRFEGG 275
Query 79 FADRPGNMVDPFHTVFGIAGLSLL 102
F R +VD ++ + A LL
Sbjct 276 FQGRTNKLVDGCYSFWQGAIFPLL 299
> tpv:TP01_0171 geranylgeranyl transferase type 2 beta subunit
Length=426
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query 19 WLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWINKR--------KLLQFILA 70
WL ER +GG+NGR K D+CY WW L+++ ++ + + + + ++ +FI
Sbjct 312 WLLERISINGGMNGRVGKSNDICYIWWSLATMFMLVKYYKKSVKLFNQTVIARITRFIGE 371
Query 71 CQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDYGQ 108
Q+ + G A++ DP+H+ + +LL+ + Q
Sbjct 372 SQNSDGGFSANKSHENSDPYHSFTALLATALLNQFHNQ 409
> sce:YGL155W CDC43, CAL1; Beta subunit of geranylgeranyltransferase
type I, catalyzes geranylgeranylation to the cysteine
residue in proteins containing a C-terminal CaaX sequence ending
in Leu or Phe; has substrates important for morphogenesis
(EC:2.5.1.59); K11713 geranylgeranyl transferase type-1
subunit beta [EC:2.5.1.59]
Length=376
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query 24 QMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHW---INKRKLLQFIL-ACQDPETGGF 79
Q GG GR K D CY++W L+SL ++ + W + ++L Q TGGF
Sbjct 271 QSDDGGFQGRENKFADTCYAFWCLNSLHLLTK-DWKMLCQTELVTNYLLDRTQKTLTGGF 329
Query 80 ADRPGNMVDPFHTVFGIAGLSLLSHDYGQDLEVP 113
+ D +H+ G A L+L+ + +L +P
Sbjct 330 SKNDEEDADLYHSCLGSAALALIEGKFNGELCIP 363
> ath:AT5G40280 ERA1; ERA1 (ENHANCED RESPONSE TO ABA 1); farnesyltranstransferase/
protein farnesyltransferase (EC:2.5.1.29);
K05954 protein farnesyltransferase subunit beta [EC:2.5.1.58]
Length=482
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 0/60 (0%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLHWIN 60
++ + ++ R+++D L W RQ G GR KL D CY++W + ++ RL+ N
Sbjct 266 AMILINEVDRLNLDSLMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQAAPCVLLQRLYSTN 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query 58 WINKRKLL--------QFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDYGQD 109
+IN+R L +++L C GGF D+P D +HT + ++GLS+ H + +D
Sbjct 380 YINRRMQLVFDSLGLQRYVLLCSKIPDGGFRDKPRKPRDFYHTCYCLSGLSVAQHAWLKD 439
Query 110 LEVP 113
+ P
Sbjct 440 EDTP 443
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query 1 SLSIAGQLHRID---VDQLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLH 57
++S+A L+ +D LG ++ Q GG+ G P Y++ L+++ +I +
Sbjct 215 AISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVD 274
Query 58 WINKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSHDYGQD 109
+N L+ + + Q E GF R +VD +T + A LL Y +
Sbjct 275 RLNLDSLMNWAVHRQGVEM-GFQGRTNKLVDGCYTFWQAAPCVLLQRLYSTN 325
> pfa:PFL0692c geranylgeranyl transferase type2 beta subunit,
putative (EC:2.5.1.-)
Length=433
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 25/114 (21%)
Query 15 QLGWWLAERQMASGGLNGRPEKLPDLCYSWWVLSSLAIIGRL--HWINKRKLLQFILACQ 72
+L WL ER + G+NGR K D+CYSWWVLSSL+ + N ++ FIL CQ
Sbjct 275 KLIRWLCER-YDNFGINGRVGKDHDVCYSWWVLSSLSSLNVNLGKAFNVNIIINFILKCQ 333
Query 73 DPETGGFADRPG---------------------NMVDPFHTVFGIAGLSLLSHD 105
D GGF+ R G D FH+ F + LSL+ ++
Sbjct 334 DKVNGGFS-RIGQDEYNINKKCMNYFKNENFFFKQTDQFHSFFSLCALSLIYYN 386
> pfa:PF11_0483 farnesyltransferase beta subunit, putative; K05954
protein farnesyltransferase subunit beta [EC:2.5.1.58]
Length=923
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query 1 SLSIAGQLHRIDVDQLGWWLAERQM-ASGGLNGRPEKLPDLCYSWWVLSSLAIIGRLH 57
+L I G++++I++ L WL +Q G GR KL D CYS+W+ S +I ++
Sbjct 620 TLCILGKVNKINLKNLTHWLMNKQSNIEGAFMGRTNKLVDSCYSFWMGSIFFLIYEIY 677
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 0/45 (0%)
Query 60 NKRKLLQFILACQDPETGGFADRPGNMVDPFHTVFGIAGLSLLSH 104
N+ L ++ C GG D+P +D +HT + ++GLSL+ +
Sbjct 807 NENFLKLYLYLCSQNSKGGMKDKPKERIDYYHTCYALSGLSLVQN 851
Score = 33.1 bits (74), Expect = 0.50, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 0/47 (0%)
Query 42 YSWWVLSSLAIIGRLHWINKRKLLQFILACQDPETGGFADRPGNMVD 88
YS+ L++L I+G+++ IN + L +++ Q G F R +VD
Sbjct 613 YSYCALATLCILGKVNKINLKNLTHWLMNKQSNIEGAFMGRTNKLVD 659
> xla:399396 nedd4l, nedd4, nedd4-2; neural precursor cell expressed,
developmentally down-regulated 4-like; K13305 E3 ubiquitin-protein
ligase NEDD4-like [EC:6.3.2.19]
Length=971
Score = 30.4 bits (67), Expect = 2.8, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query 84 GNMVDPFHTVFGIAGLSLLSHDYGQDLEVPAAADAASTSMDVADETSDKIDVNKIS 139
G+M +P+ T+ ++L + Q L PA+ D+ +T+M++++E + ++ ++ S
Sbjct 264 GDMPEPWETI--SEEMTLTTDTLNQSLPPPASPDSRATAMELSEELNRRLQISSDS 317
> dre:568845 si:ch211-12m10.1
Length=2521
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 0/43 (0%)
Query 91 HTVFGIAGLSLLSHDYGQDLEVPAAADAASTSMDVADETSDKI 133
T+ I GL L + YG D E+ A DA++ ++ V E S I
Sbjct 1357 QTISLITGLPLYNFTYGLDGELAAVTDASNNTLRVRREASGSI 1399
> hsa:55036 CCDC40, FLJ20753, FLJ32021, KIAA1640; coiled-coil
domain containing 40
Length=1142
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query 116 ADAASTSMDVADETSDKIDVNK-----ISEFIRKVNPVFCMLDSVIERRAIHIQR 165
D A T++D+ TS ++D ++ + + ++KVN + S I RR I I+R
Sbjct 672 GDIAQTTLDIT-HTSSRLDAHQKTLVELDQDVKKVNELITNSQSEISRRTILIER 725
Lambda K H
0.322 0.138 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 4222647260
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40