bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_1112_orf1
Length=121
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_027360 60S ribosomal protein L3, putative ; K02925 ... 211 4e-55
bbo:BBOV_I002850 19.m02168; ribosomal protein L3; K02925 large... 191 4e-49
tpv:TP01_0560 60S ribosomal protein L3; K02925 large subunit r... 168 5e-42
mmu:27367 Rpl3, F2, J1, MGC103388; ribosomal protein L3; K0292... 163 9e-41
hsa:6122 RPL3, MGC104284, TARBP-B; ribosomal protein L3; K0292... 163 1e-40
pfa:PF10_0272 60S ribosomal protein L3, putative; K02925 large... 159 2e-39
mmu:433745 Gm12816, OTTMUSG00000008543; predicted gene 12816 158 3e-39
cel:F13B10.2 rpl-3; Ribosomal Protein, Large subunit family me... 156 1e-38
xla:447398 MGC84749 protein 152 2e-37
xla:100037184 hypothetical protein LOC100037184 150 1e-36
xla:494722 rpl3l; ribosomal protein L3-like; K02925 large subu... 149 3e-36
ath:AT1G61580 RPL3B; RPL3B (R-PROTEIN L3 B); structural consti... 147 8e-36
xla:380033 rpl3, MGC53999; ribosomal protein L3; K02925 large ... 144 8e-35
ath:AT1G43170 ARP1; ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); st... 142 2e-34
cpv:cgd5_1580 hypothetical protein 139 1e-33
dre:322571 rpl3, MGC110350, wu:fa99g02, wu:fb65e09, zgc:110350... 139 3e-33
mmu:674810 60S ribosomal protein L3-like 134 5e-32
sce:YOR063W RPL3, MAK8, TCM1, YOR29-14; Rpl3p; K02925 large su... 133 2e-31
hsa:6123 RPL3L; ribosomal protein L3-like; K02925 large subuni... 125 2e-29
mmu:66211 Rpl3l, 1110057H16Rik; ribosomal protein L3-like; K02... 125 4e-29
pfa:PFL1960w VAR; erythrocyte membrane protein 1, PfEMP1; K138... 32.7 0.27
pfa:MAL7P1.187 VAR; erythrocyte membrane protein 1, PfEMP1; K1... 32.0 0.46
pfa:PF13_0003 VAR; erythrocyte membrane protein 1, PfEMP1; K13... 32.0 0.46
pfa:PF08_0140 VAR; erythrocyte membrane protein 1, PfEMP1; K13... 32.0 0.50
pfa:PFB1055c erythrocyte membrane protein 1, PfEMP1; K13850 er... 31.6 0.64
pfa:PFD1015c VAR; erythrocyte membrane protein 1, PfEMP1; K138... 30.4 1.4
hsa:3356 HTR2A, 5-HT2A, HTR2; 5-hydroxytryptamine (serotonin) ... 30.0 1.6
mmu:15558 Htr2a, E030013E04, Htr-2, Htr2, MGC124301, MGC124302... 30.0 1.7
pfa:MAL7P1.176 eba-175, eba_175, eba175; erythrocyte binding a... 30.0 1.8
xla:432037 tox4-b, MGC81378, lcp1, mig7; TOX high mobility gro... 30.0 2.0
dre:393193 MGC56292; zgc:56292 29.6 2.3
pfa:PFD1245c VAR; erythrocyte membrane protein 1, PfEMP1; K138... 28.9 3.6
mmu:100043762 Gm14442, OTTMUSG00000016625; predicted gene 14442 28.9
tpv:TP03_0433 ATP-dependent RNA helicase 28.5 4.9
dre:100320541 si:dkeyp-115d2.5; K08136 sparc/osteonectin, cwcv... 28.1 6.3
xla:444793 tox4-a, MGC82070, lcp1, mig7; TOX high mobility gro... 28.1 6.8
pfa:PFL0005w VAR; erythrocyte membrane protein 1, PfEMP1; K138... 28.1 7.1
dre:558928 reverse transcriptase/ribonuclease H/putative methy... 28.1 8.0
pfa:PFF1440w SET domain protein, putative 27.7 8.2
tgo:TGME49_068280 chromatin organization modifier domain-conta... 27.7 8.8
> tgo:TGME49_027360 60S ribosomal protein L3, putative ; K02925
large subunit ribosomal protein L3e
Length=389
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 90/119 (75%), Positives = 113/119 (94%), Gaps = 0/119 (0%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTH+VRE+++PGSKLHKKE+VEAVT+V++PPM+CVGVVGYIETPRGLRAL +VWAGHLS+
Sbjct 53 MTHVVRELDKPGSKLHKKEIVEAVTVVDTPPMVCVGVVGYIETPRGLRALVTVWAGHLSD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAENNKMQAEIDTIKQHCSVVRAICHTQPSKTPTG 119
EC+RRFYKNWYKSK+KAFT+Y+++Y +NNKM+AE+ +K +CSV+RAICHTQPSKTP G
Sbjct 113 ECKRRFYKNWYKSKRKAFTKYAKRYGDNNKMEAELTRMKNYCSVIRAICHTQPSKTPIG 171
> bbo:BBOV_I002850 19.m02168; ribosomal protein L3; K02925 large
subunit ribosomal protein L3e
Length=393
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 86/121 (71%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTH+ E ++PGSKLHKK+ VEAVTI+E+PPMI VG+VGYIETPRGLR L++VWAGHLS+
Sbjct 53 MTHVTHEPDKPGSKLHKKDTVEAVTIIETPPMIVVGLVGYIETPRGLRVLTTVWAGHLSD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAENNKMQAEIDTIKQHCSVVRAICHTQPSKTPTGL 120
ECRRRFYKNWYKSKKKAFT+Y++K+AE KM +I I +C+VVRAICHTQPSKTP +
Sbjct 113 ECRRRFYKNWYKSKKKAFTKYAKKFAE-TKMSKDISRIVNYCTVVRAICHTQPSKTPLSM 171
Query 121 R 121
+
Sbjct 172 K 172
> tpv:TP01_0560 60S ribosomal protein L3; K02925 large subunit
ribosomal protein L3e
Length=384
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/121 (70%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTH+V EV+RPGSKLHKKEVVEAVT+VE+PPM+CVG+VGY+ETPRGL+ L +VWAGHLS+
Sbjct 53 MTHVVTEVDRPGSKLHKKEVVEAVTVVETPPMVCVGLVGYVETPRGLKVLGTVWAGHLSD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAENNKMQAEIDTIKQHCSVVRAICHTQPSKTPTGL 120
E RRRFYKNWYKSKKKAFT+Y++K+AE M+ E+ I+ + +VVRA+ HTQPSKT L
Sbjct 113 ELRRRFYKNWYKSKKKAFTKYAKKFAETG-MEQELKRIRNYATVVRALMHTQPSKTSLSL 171
Query 121 R 121
R
Sbjct 172 R 172
> mmu:27367 Rpl3, F2, J1, MGC103388; ribosomal protein L3; K02925
large subunit ribosomal protein L3e
Length=403
Score = 163 bits (413), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 100/120 (83%), Gaps = 3/120 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTHIVREV+RPGSK++KKEVVEAVTIVE+PPM+ VG+VGY+ETPRGLR +V+A H+S+
Sbjct 53 MTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAENN---KMQAEIDTIKQHCSVVRAICHTQPSKTP 117
EC+RRFYKNW+KSKKKAFT+Y +K+ ++ +++ + +++K++C V+R I HTQ P
Sbjct 113 ECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP 172
> hsa:6122 RPL3, MGC104284, TARBP-B; ribosomal protein L3; K02925
large subunit ribosomal protein L3e
Length=403
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/120 (64%), Positives = 99/120 (82%), Gaps = 3/120 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTHIVREV+RPGSK++KKEVVEAVTIVE+PPM+ VG+VGY+ETPRGLR +V+A H+S+
Sbjct 53 MTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYA-ENNKMQAEID--TIKQHCSVVRAICHTQPSKTP 117
EC+RRFYKNW+KSKKKAFT+Y +K+ E+ K Q E D ++K++C V+R I HTQ P
Sbjct 113 ECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP 172
> pfa:PF10_0272 60S ribosomal protein L3, putative; K02925 large
subunit ribosomal protein L3e
Length=386
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 98/121 (80%), Gaps = 2/121 (1%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTHIVREV++PGSKLHKKE+VEA TI+E PM+ VG+VGY ETP+GLR LS+VWA H+S+
Sbjct 53 MTHIVREVDKPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVSD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAENNKMQAEIDTIKQHCSVVRAICHTQPSKTPTGL 120
E RRR+YKNWYKS+KKAFT+ S E K + I+++C+V+RAICHTQPSKTP +
Sbjct 113 EFRRRYYKNWYKSEKKAFTK-SLNVPEATK-NCLLKRIEKYCTVLRAICHTQPSKTPLRM 170
Query 121 R 121
+
Sbjct 171 K 171
> mmu:433745 Gm12816, OTTMUSG00000008543; predicted gene 12816
Length=403
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 98/120 (81%), Gaps = 3/120 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTHIVREV+RPGS+++KKEVVEAVTIVE+PPM+ VG+VGY+E PRGLR +V+A H+S
Sbjct 53 MTHIVREVDRPGSEVNKKEVVEAVTIVENPPMVVVGIVGYVENPRGLRTFKTVFAEHISN 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAENN---KMQAEIDTIKQHCSVVRAICHTQPSKTP 117
EC+RRFYKNW+KSKKKAFT+Y +K+ ++ +++ + +++K++C V+R I HTQ P
Sbjct 113 ECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMHLLP 172
> cel:F13B10.2 rpl-3; Ribosomal Protein, Large subunit family
member (rpl-3); K02925 large subunit ribosomal protein L3e
Length=401
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 95/115 (82%), Gaps = 3/115 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTHIVR+V++PGSK++KKEVVEAVTIVE+PPM+ GV GY++TP+G RAL+++WA HLSE
Sbjct 53 MTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSE 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAENNK---MQAEIDTIKQHCSVVRAICHTQ 112
E RRRFY NW KSKKKAFT+Y++K+ + + ++A+ +K++CS +R I HTQ
Sbjct 113 EARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQ 167
> xla:447398 MGC84749 protein
Length=420
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 93/115 (80%), Gaps = 3/115 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTH+VREV+RPGSK+HK+E+VE VTI+E PPM+ VG+VGY T RGLR +VWA HL+E
Sbjct 53 MTHVVREVDRPGSKVHKREIVEPVTILECPPMVIVGMVGYAPTARGLRTFKTVWAEHLTE 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAENNKMQA---EIDTIKQHCSVVRAICHTQ 112
ECRRRFYK+W KSK+KAFT+ S+K+A+ ++ ++ IK++C+VVRAI HTQ
Sbjct 113 ECRRRFYKDWCKSKRKAFTKASKKWADEAGLKEINRDLRKIKKYCTVVRAIAHTQ 167
> xla:100037184 hypothetical protein LOC100037184
Length=405
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/119 (68%), Positives = 100/119 (84%), Gaps = 4/119 (3%)
Query 1 MTHIVREVERPGSK-LHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLS 59
MTHIVREV RPGSK LH KE+VEAVTI+E+PPM+ VGVVGY+ TPRGLRAL++VWA +LS
Sbjct 53 MTHIVREVIRPGSKALHNKEIVEAVTIIETPPMVVVGVVGYVATPRGLRALTTVWAQNLS 112
Query 60 EECRRRFYKNWYKSKKKAFTRYSRKY---AENNKMQAEIDTIKQHCSVVRAICHTQPSK 115
EEC+RRFYK WYKSKKKAFT+Y++KY A ++ E++ IK++CSVVR I HTQ SK
Sbjct 113 EECKRRFYKTWYKSKKKAFTKYAKKYETDAGKKEIDHELERIKKYCSVVRVIAHTQMSK 171
> xla:494722 rpl3l; ribosomal protein L3-like; K02925 large subunit
ribosomal protein L3e
Length=407
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 94/120 (78%), Gaps = 3/120 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTH +RE+ RPG K+ K+E VEAVTI+E+PP++ VG+VGY+ETPRGLR+L +++A H+S+
Sbjct 53 MTHTLREIHRPGLKISKREEVEAVTIIETPPLVVVGIVGYVETPRGLRSLKTIFAEHISD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYA-ENNKMQAEID--TIKQHCSVVRAICHTQPSKTP 117
EC+RRFY+NWYKSKKK+FT+Y +K+ E K Q E D +K++C V+R I HTQ P
Sbjct 113 ECKRRFYRNWYKSKKKSFTKYCKKWQDEEGKKQLEKDFSAMKKYCKVIRVIIHTQMKLLP 172
> ath:AT1G61580 RPL3B; RPL3B (R-PROTEIN L3 B); structural constituent
of ribosome; K02925 large subunit ribosomal protein
L3e
Length=390
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/115 (67%), Positives = 99/115 (86%), Gaps = 3/115 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTHIVR+VE+PGSKLHKKE EAVTI+E+PPM+ VGVVGY++TPRGLR+L +VWA HLSE
Sbjct 53 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSE 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKY-AENNK--MQAEIDTIKQHCSVVRAICHTQ 112
E RRRFYKNW KSKKKAFTRYS+K+ E K +Q++++ +K++CSV+R + HTQ
Sbjct 113 ELRRRFYKNWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQ 167
> xla:380033 rpl3, MGC53999; ribosomal protein L3; K02925 large
subunit ribosomal protein L3e
Length=403
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/120 (63%), Positives = 101/120 (84%), Gaps = 3/120 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTHIVREV+RPGSK++KKEVVEAVT+VE+PPM+ VG+VGY++TPRGLR+L +++A H+S+
Sbjct 53 MTHIVREVDRPGSKVNKKEVVEAVTVVETPPMVIVGIVGYVQTPRGLRSLKTIFAEHISD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYA-ENNKMQAEID--TIKQHCSVVRAICHTQPSKTP 117
EC+RRFYKNWYKSKKKAFT+Y +K+ E+ K Q E D ++K++C V+R I HTQ P
Sbjct 113 ECKRRFYKNWYKSKKKAFTKYCKKWQDEDGKKQLEKDFASMKKYCQVIRVIAHTQMRLLP 172
> ath:AT1G43170 ARP1; ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1);
structural constituent of ribosome
Length=389
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/118 (63%), Positives = 99/118 (83%), Gaps = 3/118 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTHIVREVE+PGSKLHKKE EAVTI+E+P M+ VGVV Y++TPRGLR+L++VWA HLSE
Sbjct 53 MTHIVREVEKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSE 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKY-AENNK--MQAEIDTIKQHCSVVRAICHTQPSK 115
E RRRFYKNW KSKKKAFT Y+++Y +E+ K +QA+++ +K++ +V+R + HTQ K
Sbjct 113 EVRRRFYKNWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRK 170
> cpv:cgd5_1580 hypothetical protein
Length=305
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 77/85 (90%), Gaps = 0/85 (0%)
Query 32 MICVGVVGYIETPRGLRALSSVWAGHLSEECRRRFYKNWYKSKKKAFTRYSRKYAENNKM 91
MICVG VGYIETP GLRAL++V+AG+LSEEC+RRFYKN+Y+SK+KAFT+Y+R YAEN +M
Sbjct 1 MICVGFVGYIETPNGLRALTTVFAGYLSEECKRRFYKNYYRSKRKAFTKYARNYAENQRM 60
Query 92 QAEIDTIKQHCSVVRAICHTQPSKT 116
+AEI KQ+C+V+RA+CHTQ SKT
Sbjct 61 EAEIARCKQYCTVIRALCHTQVSKT 85
> dre:322571 rpl3, MGC110350, wu:fa99g02, wu:fb65e09, zgc:110350;
ribosomal protein L3; K02925 large subunit ribosomal protein
L3e
Length=403
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 98/120 (81%), Gaps = 3/120 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTHIVREV+RPGSK++KKEVVEAVT+VE+PPMI VGVVGY+ TPRGLR+ +++A H+S+
Sbjct 53 MTHIVREVDRPGSKVNKKEVVEAVTVVETPPMIVVGVVGYVMTPRGLRSFKTIFAEHISD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYA-ENNKMQAEID--TIKQHCSVVRAICHTQPSKTP 117
EC+RRFYKNWYKSKKKAFT+Y +++ E K Q E D ++K++C ++R I HTQ P
Sbjct 113 ECKRRFYKNWYKSKKKAFTKYCKRWQDEEGKKQLEKDFSSMKKYCQIIRIIAHTQMRLLP 172
> mmu:674810 60S ribosomal protein L3-like
Length=385
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 99/120 (82%), Gaps = 3/120 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTHIVREV+RPGSK++KKEVVE VTIVE+PPM+ VG+VGY+ETPRGLR +V+A H+S+
Sbjct 53 MTHIVREVDRPGSKVNKKEVVEVVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAENN---KMQAEIDTIKQHCSVVRAICHTQPSKTP 117
EC+RRFYKNW+KSKKKAFT+Y +K+ ++ +++ + +++K++C V+R I HTQ P
Sbjct 113 ECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP 172
> sce:YOR063W RPL3, MAK8, TCM1, YOR29-14; Rpl3p; K02925 large
subunit ribosomal protein L3e
Length=387
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 101/118 (85%), Gaps = 1/118 (0%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MT IVR+++RPGSK HK+EVVEAVT+V++PP++ VGVVGY+ETPRGLR+L++VWA HLS+
Sbjct 53 MTTIVRDLDRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAENNK-MQAEIDTIKQHCSVVRAICHTQPSKTP 117
E +RRFYKNWYKSKKKAFT+YS KYA++ ++ E+ IK++ SVVR + HTQ KTP
Sbjct 113 EVKRRFYKNWYKSKKKAFTKYSAKYAQDGAGIERELARIKKYASVVRVLVHTQIRKTP 170
> hsa:6123 RPL3L; ribosomal protein L3-like; K02925 large subunit
ribosomal protein L3e
Length=407
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 92/120 (76%), Gaps = 3/120 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTH +REV RPG K+ K+E VEAVTIVE+PP++ VGVVGY+ TPRGLR+ +++A HLS+
Sbjct 53 MTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAENN---KMQAEIDTIKQHCSVVRAICHTQPSKTP 117
ECRRRFYK+W+KSKKKAFT+ +++ + + ++Q + +K++C V+R I HTQ P
Sbjct 113 ECRRRFYKDWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLP 172
> mmu:66211 Rpl3l, 1110057H16Rik; ribosomal protein L3-like; K02925
large subunit ribosomal protein L3e
Length=407
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 92/120 (76%), Gaps = 3/120 (2%)
Query 1 MTHIVREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSE 60
MTH +REV RPG K+ K+E VEAVTIVE+PP++ VGVVGY+ TPRGLR+ +++A HLS+
Sbjct 53 MTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSD 112
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAENN---KMQAEIDTIKQHCSVVRAICHTQPSKTP 117
ECRRRFYK+W+KSKKKAFT+ +++ + + ++Q + +K++C V+R I HTQ P
Sbjct 113 ECRRRFYKDWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLP 172
> pfa:PFL1960w VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2359
Score = 32.7 bits (73), Expect = 0.27, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query 58 LSEECRRR--FYKNWYKSKKKAFTRYSRKY-AENNKMQAEIDTIKQHCSVV 105
L C R FYK W + KK+ FT Y + K Q E +T K+ C +
Sbjct 1436 LCSTCGRHCSFYKKWIQRKKEEFTEQYNAYGGQKTKCQTESETAKEFCGTL 1486
> pfa:MAL7P1.187 VAR; erythrocyte membrane protein 1, PfEMP1;
K13850 erythrocyte membrane protein 1
Length=2595
Score = 32.0 bits (71), Expect = 0.46, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKY------AENNKMQAEIDTIKQHCSVVRAICHT-QP 113
ECR+ YKNW K K+K F ++Y AE N E T + C V+ +P
Sbjct 1305 ECRK--YKNWIKGKRKEFEEQKQEYSKQKTDAEGNNNGNEFYTKLEECPEVKDFLQKLEP 1362
Query 114 SKTPTG 119
K G
Sbjct 1363 CKKDNG 1368
> pfa:PF13_0003 VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=3346
Score = 32.0 bits (71), Expect = 0.46, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query 65 RFYKNWYKSKKKAFTRYSRKYAENNKMQAEIDTIKQH 101
RFYK W KK+ F + S+KY + EID +K +
Sbjct 1891 RFYKKWISRKKEEFDKQSKKY------ENEIDDVKHN 1921
> pfa:PF08_0140 VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2980
Score = 32.0 bits (71), Expect = 0.50, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query 60 EECRRRFYKNWYKSKKKAFTRYSRKYAENN-KMQAE 94
EECR+ YK W + KK FT++S Y + K QA+
Sbjct 2079 EECRK--YKKWIERKKDEFTKHSNAYGDQKAKCQAK 2112
> pfa:PFB1055c erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2177
Score = 31.6 bits (70), Expect = 0.64, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query 58 LSEECRR--RFYKNWYKSKKKAFTRYSRKYAENNKMQAE 94
L C R RFYK W +K+ F + S Y+E K E
Sbjct 1313 LCPTCARHCRFYKKWINTKRDEFNKQSNAYSEQKKKYEE 1351
> pfa:PFD1015c VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2193
Score = 30.4 bits (67), Expect = 1.4, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query 62 CRR--RFYKNWYKSKKKAFTRYSRKYA-ENNKMQAEIDTIKQHCSVVR 106
C R RFYK W + KK FT Y+ + K + ++ KQ C ++
Sbjct 1295 CARHCRFYKKWIERKKDEFTEQKNAYSKQKEKCKEGSESSKQFCGTLK 1342
> hsa:3356 HTR2A, 5-HT2A, HTR2; 5-hydroxytryptamine (serotonin)
receptor 2A; K04157 5-hydroxytryptamine receptor 2
Length=471
Score = 30.0 bits (66), Expect = 1.6, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query 53 VWAGHLSEECRRRFYKNWYKSKKKAFTRYSR-KYAENNK 90
VW G+LS Y + K+ + AF+RY + +Y EN K
Sbjct 366 VWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENKK 404
> mmu:15558 Htr2a, E030013E04, Htr-2, Htr2, MGC124301, MGC124302;
5-hydroxytryptamine (serotonin) receptor 2A; K04157 5-hydroxytryptamine
receptor 2
Length=471
Score = 30.0 bits (66), Expect = 1.7, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query 53 VWAGHLSEECRRRFYKNWYKSKKKAFTRYSR-KYAENNK 90
VW G+LS Y + K+ + AF+RY + +Y EN K
Sbjct 366 VWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENRK 404
> pfa:MAL7P1.176 eba-175, eba_175, eba175; erythrocyte binding
antigen 175; K13847 erythrocyte-binding antigen 175
Length=1502
Score = 30.0 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Query 60 EECRRRF--YKNWYKSKKKAFTRYSRKYAE-----NNKMQAEIDTIK 99
+ C+R+ YK W KK+ + + +++Y E N KM +E +IK
Sbjct 660 DNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIK 706
> xla:432037 tox4-b, MGC81378, lcp1, mig7; TOX high mobility group
box family member 4
Length=594
Score = 30.0 bits (66), Expect = 2.0, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query 48 RALSSVWAGHLSEECRRRFYKNWYKSKKKAFTRYSRKYAENNKMQAEIDTIKQHCSVVRA 107
+ ++S+W L EE +++ YK ++ KK + + Y N Q +DT+ V A
Sbjct 254 KIVASMWDS-LGEE-QKQVYKRKTEAAKKEYLKALALYKANQLSQVAVDTVDLDPPAVPA 311
Query 108 ICHTQPSKTPT 118
+ P +PT
Sbjct 312 LLSESPVPSPT 322
> dre:393193 MGC56292; zgc:56292
Length=512
Score = 29.6 bits (65), Expect = 2.3, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query 60 EECRRRFYKNWYKSKKKAFTRYSRKYAENNKMQAEIDTIKQHCSV 104
E +RRF K W K +KA + + + + +A++D KQH +V
Sbjct 134 ESSKRRFEKEW-KEAEKANQQTEKVEQDASATKADVDKAKQHANV 177
> pfa:PFD1245c VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2149
Score = 28.9 bits (63), Expect = 3.6, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 7/33 (21%)
Query 65 RFYKNW-------YKSKKKAFTRYSRKYAENNK 90
RFYK W Y++++KA+T +KY E +K
Sbjct 1206 RFYKKWIEKKKTEYENQQKAYTGQKKKYEEESK 1238
> mmu:100043762 Gm14442, OTTMUSG00000016625; predicted gene 14442
Length=123
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 0/21 (0%)
Query 41 IETPRGLRALSSVWAGHLSEE 61
+ET R L A+ +W GH+SE+
Sbjct 39 LETYRNLSAIGYIWEGHISED 59
> tpv:TP03_0433 ATP-dependent RNA helicase
Length=566
Score = 28.5 bits (62), Expect = 4.9, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query 72 KSKKKAFTRYSRKYAENNKMQAEIDTIKQH 101
K +KK T + Y NN++Q+ ID++KQH
Sbjct 490 KPEKKHLT-FIPNYLINNQLQSTIDSVKQH 518
> dre:100320541 si:dkeyp-115d2.5; K08136 sparc/osteonectin, cwcv
and kazal-like domains proteoglycan (testican)
Length=422
Score = 28.1 bits (61), Expect = 6.3, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query 54 WAGHLSEECRRRFYKNWYKSKKKAFTRYSRKYAENNKMQAEIDTIKQHCSVVRAICH 110
W +S+ R+ K+W + + + Y R + EN +DT K C V+ H
Sbjct 44 WLSTISQYSRK--IKHWNRFRDEVEDDYIRSWDENQGSNENVDTTKDPCQKVKCSRH 98
> xla:444793 tox4-a, MGC82070, lcp1, mig7; TOX high mobility group
box family member 4
Length=597
Score = 28.1 bits (61), Expect = 6.8, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query 48 RALSSVWAGHLSEECRRRFYKNWYKSKKKAFTRYSRKYAENNKMQAEIDTIKQHCSVVRA 107
+ ++S+W L EE +++ YK ++ KK + + Y N Q +DT+ V A
Sbjct 254 KIVASMWDS-LGEE-QKQVYKRKTEAAKKEYLKALALYKANQLSQVAVDTVDLDPPAVPA 311
Query 108 ICHTQPSKTPT 118
+ P +P+
Sbjct 312 LLSESPVPSPS 322
> pfa:PFL0005w VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2178
Score = 28.1 bits (61), Expect = 7.1, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query 61 ECRRRFYKNWYKSKKKAFTRYSRKYAE 87
ECR+ YKNW K+K+ F + Y +
Sbjct 1226 ECRK--YKNWIKTKRTEFDEQKKAYVD 1250
> dre:558928 reverse transcriptase/ribonuclease H/putative methyltransferase-like
Length=684
Score = 28.1 bits (61), Expect = 8.0, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query 8 VERPGSKLHKKEVVEAVTIVESPPMICV 35
+E PG +HK+ + + VT+V+SPP++ V
Sbjct 1 METPGD-IHKRFIPKVVTLVDSPPLLRV 27
> pfa:PFF1440w SET domain protein, putative
Length=6753
Score = 27.7 bits (60), Expect = 8.2, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 14/59 (23%)
Query 60 EECRRRFYKNWYKSK----KKAFTRYSRKYAENNKMQAEI----------DTIKQHCSV 104
+EC N YK+K KK Y RK NK ++ D IK HCSV
Sbjct 2886 DECFYIIDNNTYKNKICTLKKTVKNYVRKKNVENKCNTKVEMNSDVILLDDNIKDHCSV 2944
> tgo:TGME49_068280 chromatin organization modifier domain-containing
protein (EC:3.4.19.3)
Length=1084
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 12/94 (12%)
Query 5 VREVERPGSKLHKKEVVEAVTIVESPPMICVGVVGYIETPRGLRALSSVWAGHLSEECRR 64
V+E PG K+ ++E P VV Y E RG+ W G+ S+E
Sbjct 560 VKETNAPGGKVKQEE----------PEYEVEDVVAYTEDDRGVARWKVRWKGYDSDEDTW 609
Query 65 RFYKNWYKSKK--KAFTRYSRKYAENNKMQAEID 96
N S K R R++ +++ +E D
Sbjct 610 ETRANLRGSPAFWKQMDRLQREWRRDHRADSETD 643
Lambda K H
0.319 0.131 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2013067560
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40