bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_1447_orf1
Length=98
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_042800 TGF-beta-inducible nuclear protein 1, putati... 113 2e-25
dre:321769 nsa2, fb34b10, wu:fb34b10, zgc:56334; NSA2 ribosome... 98.6 4e-21
mmu:59050 Nsa2, 5730427N09Rik, LNR42, MGC118054, Nsa2p, Tinp1,... 97.4 9e-21
mmu:636306 ribosome biogenesis protein NSA2 homolog; K14842 ri... 97.4 9e-21
mmu:433230 Gm5515, EG433230; predicted gene 5515; K14842 ribos... 97.4 9e-21
hsa:10412 NSA2, CDK105, HCL-G1, HCLG1, HUSSY29, TINP1, YR-29; ... 96.7 2e-20
cpv:cgd3_4100 conserved protein, COG SSU ribosomal protein S8E... 95.5 4e-20
xla:100381087 nsa2, cdk105, hcl-g1, hclg1, hussy-29, hussy29, ... 94.7 6e-20
ath:AT5G06360 ribosomal protein S8e family protein; K14842 rib... 81.3 6e-16
cel:W09C5.1 hypothetical protein; K14842 ribosome biogenesis p... 73.2 2e-13
tpv:TP03_0821 hypothetical protein; K14842 ribosome biogenesis... 72.8 3e-13
pfa:MAL7P1.24 cdk105, putative; K14842 ribosome biogenesis pro... 71.6 6e-13
bbo:BBOV_III000260 17.m07048; ribosomal protein Se8; K14842 ri... 60.5 1e-09
sce:YER126C NSA2; Nsa2p; K14842 ribosome biogenesis protein NSA2 57.4 1e-08
dre:403003 fgf13b, MGC76868, fgf13l, zgc:76868; fibroblast gro... 28.9 3.7
ath:AT5G61890 AP2 domain-containing transcription factor famil... 28.1 8.0
> tgo:TGME49_042800 TGF-beta-inducible nuclear protein 1, putative
; K14842 ribosome biogenesis protein NSA2
Length=260
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 67/81 (82%), Gaps = 0/81 (0%)
Query 18 ERKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETV 77
ER+RKKAAR PH+ SK AR+LRGIK+KLFN++R+VE+A MK T+KH EEK+ K EPE
Sbjct 22 ERQRKKAAREPHKLSKQARRLRGIKSKLFNKKRYVEKATMKKTLKHFEEKDAKSAEPEQA 81
Query 78 PEGAVPSYLLDREGASRTKIL 98
P+GAVP+YLLDRE RTK+L
Sbjct 82 PDGAVPAYLLDREAVKRTKVL 102
> dre:321769 nsa2, fb34b10, wu:fb34b10, zgc:56334; NSA2 ribosome
biogenesis homolog (S. cerevisiae); K14842 ribosome biogenesis
protein NSA2
Length=260
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 64/81 (79%), Gaps = 0/81 (0%)
Query 18 ERKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETV 77
E+KRKK +R HERS ARK+ G+KAKL++++R E+ QMK TIK HE+++ KQK+ +
Sbjct 22 EKKRKKESREAHERSHKARKMIGLKAKLYHKQRHAEKIQMKKTIKMHEQRKSKQKDDDKT 81
Query 78 PEGAVPSYLLDREGASRTKIL 98
PEGAVP+YLLDREG SR K+L
Sbjct 82 PEGAVPAYLLDREGQSRAKVL 102
> mmu:59050 Nsa2, 5730427N09Rik, LNR42, MGC118054, Nsa2p, Tinp1,
Yr29; NSA2 ribosome biogenesis homolog (S. cerevisiae); K14842
ribosome biogenesis protein NSA2
Length=260
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 0/81 (0%)
Query 18 ERKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETV 77
E+KRKK R HERSK A+K+ G+KAKL++++R E+ QMK TIK HE++ KQK+ E
Sbjct 22 EKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKDDEKT 81
Query 78 PEGAVPSYLLDREGASRTKIL 98
P+GAVP+YLLDREG SR K+L
Sbjct 82 PQGAVPAYLLDREGQSRAKVL 102
> mmu:636306 ribosome biogenesis protein NSA2 homolog; K14842
ribosome biogenesis protein NSA2
Length=260
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 0/81 (0%)
Query 18 ERKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETV 77
E+KRKK R HERSK A+K+ G+KAKL++++R E+ QMK TIK HE++ KQK+ E
Sbjct 22 EKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKDDEKT 81
Query 78 PEGAVPSYLLDREGASRTKIL 98
P+GAVP+YLLDREG SR K+L
Sbjct 82 PQGAVPAYLLDREGQSRAKVL 102
> mmu:433230 Gm5515, EG433230; predicted gene 5515; K14842 ribosome
biogenesis protein NSA2
Length=260
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 0/81 (0%)
Query 18 ERKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETV 77
E+KRKK R HERSK A+K+ G+KAKL++++R E+ QMK TIK HE++ KQK+ E
Sbjct 22 EKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKDDEKT 81
Query 78 PEGAVPSYLLDREGASRTKIL 98
P+GAVP+YLLDREG SR K+L
Sbjct 82 PQGAVPAYLLDREGQSRAKVL 102
> hsa:10412 NSA2, CDK105, HCL-G1, HCLG1, HUSSY29, TINP1, YR-29;
NSA2 ribosome biogenesis homolog (S. cerevisiae); K14842 ribosome
biogenesis protein NSA2
Length=260
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 0/81 (0%)
Query 18 ERKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETV 77
E+KRKK +R HERSK A+K+ G+KAKL++++R E+ QMK TIK HE++ KQK E
Sbjct 22 EKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKT 81
Query 78 PEGAVPSYLLDREGASRTKIL 98
P+GAVP+YLLDREG SR K+L
Sbjct 82 PQGAVPAYLLDREGQSRAKVL 102
> cpv:cgd3_4100 conserved protein, COG SSU ribosomal protein S8E
; K14842 ribosome biogenesis protein NSA2
Length=260
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 65/81 (80%), Gaps = 0/81 (0%)
Query 18 ERKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETV 77
E+KRK +R H+ S+ A+KLRGIKAKL+N++R+ E+A ++ +K +EEK+ +K+PE V
Sbjct 22 EKKRKFESRKVHKDSQHAQKLRGIKAKLYNKKRYAEKATLRKLVKANEEKDAVEKDPENV 81
Query 78 PEGAVPSYLLDREGASRTKIL 98
+GAVPSYLLDREG +RTKIL
Sbjct 82 QKGAVPSYLLDREGVNRTKIL 102
> xla:100381087 nsa2, cdk105, hcl-g1, hclg1, hussy-29, hussy29,
tinp1, yr-29; NSA2 ribosome biogenesis homolog; K14842 ribosome
biogenesis protein NSA2
Length=260
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 0/81 (0%)
Query 18 ERKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETV 77
E+KRKK +R HERS+ A+KL G+KAKL++++R E+ QMK T+K HE++ KQK E
Sbjct 22 EKKRKKESREAHERSQKAKKLIGLKAKLYHKQRHAEKIQMKKTLKMHEKRNTKQKNEEKT 81
Query 78 PEGAVPSYLLDREGASRTKIL 98
PEGAVP+YLLDREG +R K+L
Sbjct 82 PEGAVPAYLLDREGQTRAKVL 102
> ath:AT5G06360 ribosomal protein S8e family protein; K14842 ribosome
biogenesis protein NSA2
Length=260
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 0/81 (0%)
Query 18 ERKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETV 77
ERKRKK AR H+ S A+K GIK K+ ++ + E+A MK T+K HEE ++K E V
Sbjct 22 ERKRKKEAREVHKHSTMAQKSLGIKGKMIAKKNYAEKALMKKTLKMHEESSSRRKADENV 81
Query 78 PEGAVPSYLLDREGASRTKIL 98
EGAVP+YLLDRE +R K+L
Sbjct 82 QEGAVPAYLLDREDTTRAKVL 102
> cel:W09C5.1 hypothetical protein; K14842 ribosome biogenesis
protein NSA2
Length=259
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
Query 18 ERKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETV 77
ER+RKK AR H+RS+ A+ LRG KAKL++++R+ E+ +M+ +K HEEK+ QK
Sbjct 22 ERQRKKLARAAHDRSQMAKTLRGHKAKLYHKKRYSEKVEMRKLLKQHEEKD--QKNTVEQ 79
Query 78 PE-GAVPSYLLDREGASRTKIL 98
P+ GAVP+YLLDR+ + +L
Sbjct 80 PDKGAVPAYLLDRQQQTSGTVL 101
> tpv:TP03_0821 hypothetical protein; K14842 ribosome biogenesis
protein NSA2
Length=259
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query 21 RKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETVPEG 80
RKKAAR P SK A+ LRGIK+K+F + ++ E+ Q + ++ EEKE K+K E +G
Sbjct 25 RKKAARAPLRESKRAKTLRGIKSKIFKKHKYAEKIQFRKLMRQREEKEVKEKIVEKT-DG 83
Query 81 AVPSYLLDREGASRTKIL 98
A+P+YLLDR +RTKIL
Sbjct 84 AIPAYLLDRGDINRTKIL 101
> pfa:MAL7P1.24 cdk105, putative; K14842 ribosome biogenesis protein
NSA2
Length=259
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query 18 ERKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETV 77
E++RKK AR H+ S A+KLRGIKAK++N++++ E+ +K T+K HE K+ K E
Sbjct 22 EKERKKEARKVHKDSLKAKKLRGIKAKIYNKKKYTEKVNLKKTLKSHELKDIKSTETLKD 81
Query 78 PEGAVPSYLLDREGASRTKIL 98
G +PSYLLDR+ T+IL
Sbjct 82 DNG-LPSYLLDRQQTKHTQIL 101
> bbo:BBOV_III000260 17.m07048; ribosomal protein Se8; K14842
ribosome biogenesis protein NSA2
Length=259
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Query 19 RKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETVP 78
R RKK AR H SK +K+RG+KAK+F +RR+ E+ +MK IK++EEKE KE P
Sbjct 23 RMRKKTARAAHTLSKKMQKMRGLKAKIFRKRRYAEKIEMKKQIKNNEEKE--SKEEVVAP 80
Query 79 -EGAVPSYLLDREGASRTKIL 98
+GA+P+YLL+R +RTKIL
Sbjct 81 GDGAIPAYLLERGEVNRTKIL 101
> sce:YER126C NSA2; Nsa2p; K14842 ribosome biogenesis protein
NSA2
Length=261
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query 18 ERKRKKAARTPHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGK-QKEPET 76
ERKRK+ AR H+ S+ A+KL G K K F ++R+ E+ M+ IK HE+ + K +P
Sbjct 22 ERKRKREARESHKISERAQKLTGWKGKQFAKKRYAEKVSMRKKIKAHEQSKVKGSSKPLD 81
Query 77 VPEGAVPSYLLDRE 90
A+P+YLLDRE
Sbjct 82 TDGDALPTYLLDRE 95
> dre:403003 fgf13b, MGC76868, fgf13l, zgc:76868; fibroblast growth
factor 13b; K04358 fibroblast growth factor
Length=193
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 0/53 (0%)
Query 28 PHERSKTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETVPEG 80
P RS + +L+GI KL++R+ F Q Q TI +E++ +P G
Sbjct 4 PLRRSVSEPQLKGIVTKLYSRQGFHLQLQADGTIDGTKEEDNSFAIFNLIPVG 56
> ath:AT5G61890 AP2 domain-containing transcription factor family
protein
Length=248
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query 33 KTARKLRGIKAKLFNRRRFVEQAQMKTTIKHHEEKEGKQKEPETVP 78
+ A K +G KAKL F E+ Q+ + ++ + Q EP+++P
Sbjct 131 EAALKFKGSKAKL----NFPERVQLGSNSTYYSSNQIPQMEPQSIP 172
Lambda K H
0.315 0.129 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2050913756
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40