bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_865 164,496 sequences; 82,071,388 total letters Query= Emax_1861_orf1 Length=126 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_088680 endonuclease V, putative (EC:3.1.21.2); K107... 184 6e-47 tpv:TP02_0334 apurinic/apyrimidinic endonuclease; K10771 AP en... 181 7e-46 bbo:BBOV_III005900 17.m07523; apurinic endonuclease (APN1) fam... 175 3e-44 pfa:PF13_0176 apn1; apurinic/apyrimidinic endonuclease Apn1 (E... 170 1e-42 cpv:cgd1_310 AP endonuclease of the TIM barrel fold, possible ... 162 3e-40 sce:YKL114C APN1; Apn1p (EC:4.2.99.18); K10771 AP endonuclease... 145 3e-35 dre:558198 APurinic/apyrimidinic endoNuclease family member (a... 141 5e-34 eco:b2159 nfo, ECK2152, JW2146; endonuclease IV with intrinsic... 137 8e-33 cel:T05H10.2 apn-1; APurinic/apyrimidinic endoNuclease family ... 135 4e-32 ath:AT4G20060 EMB1895 (EMBRYO DEFECTIVE 1895); binding; K13144... 29.6 2.4 mmu:16179 Irak1, AA408924, IRAK, IRAK-1, IRAK1-S, Il1rak, Plpk... 29.6 2.8 eco:b4003 zraS, ECK3995, hydH, JW3967; sensory histidine kinas... 29.3 3.5 pfa:PF14_0613 conserved Plasmodium membrane protein, unknown f... 28.9 3.8 ath:AT3G10320 transferase, transferring glycosyl groups 28.9 4.5 > tgo:TGME49_088680 endonuclease V, putative (EC:3.1.21.2); K10771 AP endonuclease 1 [EC:4.2.99.18] Length=667 Score = 184 bits (467), Expect = 6e-47, Method: Composition-based stats. Identities = 86/126 (68%), Positives = 105/126 (83%), Gaps = 0/126 (0%) Query 1 SKEEGIRNIAAAVNRAHKDTKFVVVVLENMAGQKNVIGSKFEDLRDIIDLVEDKDRVGVC 60 +KEE IR+IA +N+A TK V ++LENMAGQKNV+ S+FEDLRDII LV+ KDR+GVC Sbjct 498 TKEESIRHIAECLNKAIAATKSVTILLENMAGQKNVLCSEFEDLRDIIALVDRKDRIGVC 557 Query 61 LDTCHLFAAGYDIRTAEKFEKVMEDFDSIVGYKFLKGMHLNDSKSELSSGLDRHELLGKG 120 LDTCHL++AG+DI+T EKFE VM+ FDSIVG K+LK MH+NDSK+ L SGLDRHE LGKG Sbjct 558 LDTCHLYSAGHDIKTEEKFEAVMKKFDSIVGMKYLKAMHINDSKAPLGSGLDRHEHLGKG 617 Query 121 HLGLEP 126 LG+ P Sbjct 618 TLGMAP 623 > tpv:TP02_0334 apurinic/apyrimidinic endonuclease; K10771 AP endonuclease 1 [EC:4.2.99.18] Length=422 Score = 181 bits (458), Expect = 7e-46, Method: Composition-based stats. Identities = 84/121 (69%), Positives = 103/121 (85%), Gaps = 0/121 (0%) Query 2 KEEGIRNIAAAVNRAHKDTKFVVVVLENMAGQKNVIGSKFEDLRDIIDLVEDKDRVGVCL 61 K EGI++I+ +N+A + TK V +VLEN AGQKNVIGSKFEDLR IID VEDK RVG+CL Sbjct 257 KSEGIQHISDCINKALEMTKGVTIVLENAAGQKNVIGSKFEDLRQIIDKVEDKSRVGICL 316 Query 62 DTCHLFAAGYDIRTAEKFEKVMEDFDSIVGYKFLKGMHLNDSKSELSSGLDRHELLGKGH 121 DTCHLFAAGYDIRT E+F++VM++FD +VG K+L+ +HLNDSKS+L SGLDRHE +GKG Sbjct 317 DTCHLFAAGYDIRTTEQFDEVMKEFDKVVGLKYLRAVHLNDSKSDLGSGLDRHENIGKGK 376 Query 122 L 122 L Sbjct 377 L 377 > bbo:BBOV_III005900 17.m07523; apurinic endonuclease (APN1) family protein; K10771 AP endonuclease 1 [EC:4.2.99.18] Length=374 Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 86/124 (69%), Positives = 97/124 (78%), Gaps = 0/124 (0%) Query 2 KEEGIRNIAAAVNRAHKDTKFVVVVLENMAGQKNVIGSKFEDLRDIIDLVEDKDRVGVCL 61 K EGIRNIA +N A K+T +VLEN AGQKNVIGS FEDLRDII+LVE+KDRV VCL Sbjct 201 KPEGIRNIANCINMAMKETSSAKIVLENAAGQKNVIGSTFEDLRDIINLVENKDRVAVCL 260 Query 62 DTCHLFAAGYDIRTAEKFEKVMEDFDSIVGYKFLKGMHLNDSKSELSSGLDRHELLGKGH 121 DTCHLFAAGYDIRT +KFE VM FD I+G K+L +HLND KS+L SGLDRHE +G G Sbjct 261 DTCHLFAAGYDIRTKDKFEAVMRSFDEIIGLKYLVAVHLNDCKSDLGSGLDRHENIGIGK 320 Query 122 LGLE 125 L E Sbjct 321 LTRE 324 > pfa:PF13_0176 apn1; apurinic/apyrimidinic endonuclease Apn1 (EC:4.2.99.18); K10771 AP endonuclease 1 [EC:4.2.99.18] Length=597 Score = 170 bits (430), Expect = 1e-42, Method: Composition-based stats. Identities = 79/123 (64%), Positives = 101/123 (82%), Gaps = 0/123 (0%) Query 3 EEGIRNIAAAVNRAHKDTKFVVVVLENMAGQKNVIGSKFEDLRDIIDLVEDKDRVGVCLD 62 +EGI+N+A +N+ HK+T V++VLEN AGQKN +GSKFE LRDII+LV DKDR+GVCLD Sbjct 431 DEGIKNVADCINKVHKETNNVIIVLENSAGQKNSVGSKFEHLRDIINLVHDKDRIGVCLD 490 Query 63 TCHLFAAGYDIRTAEKFEKVMEDFDSIVGYKFLKGMHLNDSKSELSSGLDRHELLGKGHL 122 TCH FAAGY+I+T E F+ VM+ FD IV K+LK +HLNDSKS++ SGLDRHE +GKG L Sbjct 491 TCHTFAAGYNIKTFENFDNVMKQFDDIVNVKYLKAVHLNDSKSDIGSGLDRHENIGKGKL 550 Query 123 GLE 125 ++ Sbjct 551 TMD 553 > cpv:cgd1_310 AP endonuclease of the TIM barrel fold, possible bacterial horizontal transfer ; K10771 AP endonuclease 1 [EC:4.2.99.18] Length=364 Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 75/125 (60%), Positives = 101/125 (80%), Gaps = 1/125 (0%) Query 1 SKEEGIRNIAAAVNRAHKDTKFVVVVLENMAGQKNVIGSKFEDLRDIIDLVEDKDRVGVC 60 SKEE I+ I+ +N+AH+ TK V+ VLEN A K +G +F++L +II+ V+DK R+GVC Sbjct 196 SKEESIQFISDCINKAHEQTKSVITVLENCAESK-CVGYRFKELSEIIERVKDKSRIGVC 254 Query 61 LDTCHLFAAGYDIRTAEKFEKVMEDFDSIVGYKFLKGMHLNDSKSELSSGLDRHELLGKG 120 LDTCHLFAAGYD+RTAE F KVM +F++++G K+LK MHLNDSK + +SGLDRHE LGKG Sbjct 255 LDTCHLFAAGYDVRTAESFNKVMVEFEAVIGLKYLKAMHLNDSKGQFNSGLDRHENLGKG 314 Query 121 HLGLE 125 ++G+E Sbjct 315 NIGME 319 > sce:YKL114C APN1; Apn1p (EC:4.2.99.18); K10771 AP endonuclease 1 [EC:4.2.99.18] Length=367 Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 61/120 (50%), Positives = 92/120 (76%), Gaps = 0/120 (0%) Query 6 IRNIAAAVNRAHKDTKFVVVVLENMAGQKNVIGSKFEDLRDIIDLVEDKDRVGVCLDTCH 65 ++ +A+ +N+A K+TKFV +VLENMAG N++GS DL+++I ++EDK R+GVC+DTCH Sbjct 136 LKQLASYLNKAIKETKFVKIVLENMAGTGNLVGSSLVDLKEVIGMIEDKSRIGVCIDTCH 195 Query 66 LFAAGYDIRTAEKFEKVMEDFDSIVGYKFLKGMHLNDSKSELSSGLDRHELLGKGHLGLE 125 FAAGYDI T E F ++F+ ++G+K+L +HLNDSK+ L + D HE LG+G+LG++ Sbjct 196 TFAAGYDISTTETFNNFWKEFNDVIGFKYLSAVHLNDSKAPLGANRDLHERLGQGYLGID 255 > dre:558198 APurinic/apyrimidinic endoNuclease family member (apn-1)-like Length=296 Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 65/124 (52%), Positives = 87/124 (70%), Gaps = 0/124 (0%) Query 1 SKEEGIRNIAAAVNRAHKDTKFVVVVLENMAGQKNVIGSKFEDLRDIIDLVEDKDRVGVC 60 S E+ + IA A+N AH+ T V+ VLENM+GQ + IG +F +L+ IID V DK RVGVC Sbjct 127 SPEKCMEKIAQAINHAHQQTPAVITVLENMSGQGSTIGGQFSELKGIIDRVRDKSRVGVC 186 Query 61 LDTCHLFAAGYDIRTAEKFEKVMEDFDSIVGYKFLKGMHLNDSKSELSSGLDRHELLGKG 120 LDTCH FAAGYDI ++++FD +VG +L+ +HLNDSK +L S LDRHE +G G Sbjct 187 LDTCHAFAAGYDISPPGGVNNMLDEFDRVVGLHYLRAVHLNDSKGKLGSHLDRHEDIGHG 246 Query 121 HLGL 124 +G+ Sbjct 247 QIGI 250 > eco:b2159 nfo, ECK2152, JW2146; endonuclease IV with intrinsic 3'-5' exonuclease activity (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] Length=285 Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 67/123 (54%), Positives = 87/123 (70%), Gaps = 0/123 (0%) Query 1 SKEEGIRNIAAAVNRAHKDTKFVVVVLENMAGQKNVIGSKFEDLRDIIDLVEDKDRVGVC 60 S+E+ + IA ++N A T+ V V+EN AGQ + +G KFE L IID VEDK RVGVC Sbjct 118 SEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVC 177 Query 61 LDTCHLFAAGYDIRTAEKFEKVMEDFDSIVGYKFLKGMHLNDSKSELSSGLDRHELLGKG 120 +DTCH FAAGYD+RT + EK DF VG+K+L+GMHLND+KS S +DRH LG+G Sbjct 178 IDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEG 237 Query 121 HLG 123 ++G Sbjct 238 NIG 240 > cel:T05H10.2 apn-1; APurinic/apyrimidinic endoNuclease family member (apn-1); K10771 AP endonuclease 1 [EC:4.2.99.18] Length=396 Score = 135 bits (339), Expect = 4e-32, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 91/122 (74%), Gaps = 0/122 (0%) Query 2 KEEGIRNIAAAVNRAHKDTKFVVVVLENMAGQKNVIGSKFEDLRDIIDLVEDKDRVGVCL 61 KEE + IA ++ + T+ +++VLE MAGQ N IG FE+L+ IID V+ K RVGVC+ Sbjct 235 KEECMTTIAETIDFVVEKTENIILVLETMAGQGNSIGGTFEELKFIIDKVKVKSRVGVCI 294 Query 62 DTCHLFAAGYDIRTAEKFEKVMEDFDSIVGYKFLKGMHLNDSKSELSSGLDRHELLGKGH 121 DTCH+FA GYDIRT + +E+VM++F +VG+ +LK +H+NDSK ++ S LDRHE +G+G Sbjct 295 DTCHIFAGGYDIRTQKAYEEVMKNFGEVVGWNYLKAIHINDSKGDVGSKLDRHEHIGQGK 354 Query 122 LG 123 +G Sbjct 355 IG 356 > ath:AT4G20060 EMB1895 (EMBRYO DEFECTIVE 1895); binding; K13144 integrator complex subunit 7 Length=1134 Score = 29.6 bits (65), Expect = 2.4, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 0/31 (0%) Query 21 KFVVVVLENMAGQKNVIGSKFEDLRDIIDLV 51 KF++V LEN+ G N++ +E ++ I + V Sbjct 510 KFLIVFLENLEGDDNLLSEIYEKVKHITEFV 540 > mmu:16179 Irak1, AA408924, IRAK, IRAK-1, IRAK1-S, Il1rak, Plpk, mPLK; interleukin-1 receptor-associated kinase 1 (EC:2.7.11.1); K04730 interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1] Length=750 Score = 29.6 bits (65), Expect = 2.8, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 8/64 (12%) Query 3 EEGIRNIAAAVNRAHKDT-KFVVVVLENMAGQKNV--IGSKFEDLRDIIDLVEDKDRVGV 59 EE I+ AV+ DT F VV+LE +AGQ+ V G+K + L+D+I+ ++ + GV Sbjct 394 EEYIKTGRLAVD---TDTFSFGVVILETLAGQRAVRTQGAKTKYLKDLIE--DEAEEAGV 448 Query 60 CLDT 63 L + Sbjct 449 TLKS 452 > eco:b4003 zraS, ECK3995, hydH, JW3967; sensory histidine kinase in two-component regulatory system with ZraR; K07709 two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] Length=465 Score = 29.3 bits (64), Expect = 3.5, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 0/36 (0%) Query 26 VLENMAGQKNVIGSKFEDLRDIIDLVEDKDRVGVCL 61 +LE MAGQ V+ D + II L D D+VG L Sbjct 80 LLEEMAGQPGVLWFAVTDAQGIIILHSDPDKVGRAL 115 > pfa:PF14_0613 conserved Plasmodium membrane protein, unknown function Length=3251 Score = 28.9 bits (63), Expect = 3.8, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 0/39 (0%) Query 25 VVLENMAGQKNVIGSKFEDLRDIIDLVEDKDRVGVCLDT 63 + LE+ K++ K D++D+ID+ +DK + L T Sbjct 2559 ITLEDKENMKDIYNEKISDIKDVIDIRKDKQDISTTLCT 2597 > ath:AT3G10320 transferase, transferring glycosyl groups Length=494 Score = 28.9 bits (63), Expect = 4.5, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 5/36 (13%) Query 77 EKFEK---VMEDFDSIV--GYKFLKGMHLNDSKSEL 107 EK++K +++D +SI G++F KG++LND K L Sbjct 441 EKYDKDDPILKDPNSITKKGWQFTKGIYLNDQKVRL 476 Lambda K H 0.319 0.138 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2059772308 Database: egene_temp_file_orthology_annotation_similarity_blast_database_865 Posted date: Sep 17, 2011 11:19 AM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40