bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_865 164,496 sequences; 82,071,388 total letters Query= Emax_2419_orf1 Length=112 Score E Sequences producing significant alignments: (Bits) Value cpv:cgd3_3020 possible guaning nucleotide exchange factor, eIF... 79.7 2e-15 ath:AT5G38640 eukaryotic translation initiation factor 2B fami... 69.7 2e-12 dre:541548 eif2b4, si:ch211-101l18.4, wu:fb54a09, zgc:110790; ... 67.4 1e-11 pfa:PF10_0136 initiation factor 2 subunit family, putative 67.0 2e-11 hsa:8890 EIF2B4, DKFZp586J0119, EIF-2B, EIF2B, EIF2Bdelta; euk... 65.5 4e-11 mmu:13667 Eif2b4, Eif2b; eukaryotic translation initiation fac... 65.5 5e-11 xla:496301 eif2b4; eukaryotic translation initiation factor 2B... 63.2 2e-10 ath:AT1G48970 GTP binding / translation initiation factor 61.6 6e-10 ath:AT2G44070 GTP binding / translation initiation factor; K03... 61.2 8e-10 sce:YGR083C GCD2, GCD12; Delta subunit of the translation init... 49.7 2e-06 bbo:BBOV_IV004670 23.m06553; hypothetical protein 30.4 1.3 > cpv:cgd3_3020 possible guaning nucleotide exchange factor, eIF-2B ; K03680 translation initiation factor eIF-2B subunit delta Length=357 Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 34/73 (46%), Positives = 52/73 (71%), Gaps = 0/73 (0%) Query 40 QEIIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHIKLSLDRR 99 Q IHPA++R+G++M +RKI G N R+ +L + +EDY PPY+SI++H+K+ LD Sbjct 34 QSKIHPAILRLGMRMKDRKIVGTNMRSKCLLIAIGQMLEDYYCPPYKSIEKHLKMVLDVH 93 Query 100 INFITNCRPHNFA 112 I++IT+ R HN A Sbjct 94 ISYITSQRQHNIA 106 > ath:AT5G38640 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein; K03680 translation initiation factor eIF-2B subunit delta Length=642 Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 0/71 (0%) Query 38 FRQEIIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHIKLSLD 97 F+ + +HPAV +VGLQ + I G NAR +AML +F ++DYS PP +S++R + + Sbjct 312 FQLDPMHPAVYKVGLQYLSGDISGGNARCIAMLQAFQEVVKDYSTPPEKSLNRDMTAKIS 371 Query 98 RRINFITNCRP 108 ++F+ CRP Sbjct 372 SYVSFLIECRP 382 > dre:541548 eif2b4, si:ch211-101l18.4, wu:fb54a09, zgc:110790; eukaryotic translation initiation factor 2B, subunit 4 delta; K03680 translation initiation factor eIF-2B subunit delta Length=540 Score = 67.4 bits (163), Expect = 1e-11, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 0/67 (0%) Query 42 IIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHIKLSLDRRIN 101 +IHP+++R+GLQ + I G+NAR+VA+L +F I+DYS PP E + R + L I+ Sbjct 219 VIHPSIVRLGLQYSQGIIAGSNARSVALLHAFKQVIQDYSTPPNEELSRDLVNKLSPYIS 278 Query 102 FITNCRP 108 F++ CRP Sbjct 279 FLSQCRP 285 > pfa:PF10_0136 initiation factor 2 subunit family, putative Length=1074 Score = 67.0 bits (162), Expect = 2e-11, Method: Composition-based stats. Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 0/86 (0%) Query 27 RLPLHLRLLMNFRQEIIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYE 86 ++ ++ ++L++ Q IHP ++R G+ I N R V +L + FI+DY+ PPYE Sbjct 307 KINMYDKILLDLNQNEIHPNILRTGIFFNKCSITTHNHRNVDLLIALKSFIKDYTLPPYE 366 Query 87 SIDRHIKLSLDRRINFITNCRPHNFA 112 I++H+K+ +D+ IN+I C+ H+ + Sbjct 367 PINKHMKVVIDKEINYIIMCKKHSVS 392 > hsa:8890 EIF2B4, DKFZp586J0119, EIF-2B, EIF2B, EIF2Bdelta; eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa; K03680 translation initiation factor eIF-2B subunit delta Length=523 Score = 65.5 bits (158), Expect = 4e-11, Method: Composition-based stats. Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 0/77 (0%) Query 32 LRLLMNFRQEIIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRH 91 L M+ +IHPA++R+GLQ + + G+NAR +A+L + I+DY+ PP E + R Sbjct 192 LTQFMSIPSSVIHPAMVRLGLQYSQGLVSGSNARCIALLRALQQVIQDYTTPPNEELSRD 251 Query 92 IKLSLDRRINFITNCRP 108 + L ++F+T CRP Sbjct 252 LVNKLKPYMSFLTQCRP 268 > mmu:13667 Eif2b4, Eif2b; eukaryotic translation initiation factor 2B, subunit 4 delta; K03680 translation initiation factor eIF-2B subunit delta Length=544 Score = 65.5 bits (158), Expect = 5e-11, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 0/73 (0%) Query 36 MNFRQEIIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHIKLS 95 M+ +IHPA++R+GLQ + I G+NAR +A+L + I+DY+ PP E + R + Sbjct 217 MSIPSSVIHPAMVRLGLQYSQGLISGSNARCIALLHALQQVIQDYTTPPSEELSRDLVNK 276 Query 96 LDRRINFITNCRP 108 L I+F+T CRP Sbjct 277 LKPYISFLTQCRP 289 > xla:496301 eif2b4; eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa; K03680 translation initiation factor eIF-2B subunit delta Length=569 Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 2/96 (2%) Query 13 TIISSSSSSNSSSSRLPLHLRLLMNFRQEIIHPAVIRVGLQMANRKIQGANARTVAMLSS 72 T +S S + S +LPL M+ +IHP V+R+GLQ ++ I G+N+R +A+L Sbjct 221 TKVSLFSHLHQYSRKLPLTQH--MSIPSSVIHPVVVRLGLQYSHGIINGSNSRCIALLHC 278 Query 73 FNCFIEDYSPPPYESIDRHIKLSLDRRINFITNCRP 108 F I DY+ P E + R + L I+F+ CRP Sbjct 279 FKQVIRDYTTPQQEELSRDLVNKLKPYISFLNQCRP 314 > ath:AT1G48970 GTP binding / translation initiation factor Length=666 Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 0/71 (0%) Query 38 FRQEIIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHIKLSLD 97 F + IH AV +VGLQ I G NAR +AML +F IEDYS PP + + + ++ Sbjct 335 FTLDSIHHAVYKVGLQHLAGDISGDNARCIAMLQAFQEAIEDYSTPPMKDLTMDLTAKIN 394 Query 98 RRINFITNCRP 108 ++F+ CRP Sbjct 395 GYVSFLIECRP 405 > ath:AT2G44070 GTP binding / translation initiation factor; K03680 translation initiation factor eIF-2B subunit delta Length=333 Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 0/66 (0%) Query 43 IHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHIKLSLDRRINF 102 +H AV +VGL + I G NAR +AML +F ++DYS PP +++R + + ++F Sbjct 1 MHSAVYKVGLHYLSWDISGGNARCIAMLQAFQEVVKDYSTPPENTLNRDMTAQISSYVSF 60 Query 103 ITNCRP 108 + CRP Sbjct 61 LIECRP 66 > sce:YGR083C GCD2, GCD12; Delta subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a negative regulator of GCN4 expression; K03680 translation initiation factor eIF-2B subunit delta Length=651 Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query 33 RLLMNFRQEIIHPAVIRVGLQMANRKIQGANARTVAMLSSFNCFIEDYSPPPYESIDRHI 92 LL+N +++IHP+++ + +A+ KI G+ R +AML F I+DY P ++ R++ Sbjct 262 ELLLN--KDLIHPSILLLTSHLAHYKIVGSIPRCIAMLEVFQIVIKDYQTPKGTTLSRNL 319 Query 93 KLSLDRRINFITNCRP 108 L +I+ + RP Sbjct 320 TSYLSHQIDLLKKARP 335 > bbo:BBOV_IV004670 23.m06553; hypothetical protein Length=880 Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query 12 STIISSSSSSNSSSSRLPLHLRLLMNFRQEIIHPAVIRVGLQMANRKIQGANARTVAMLS 71 S++I S N+S RL L++ L+ FR+ I ++R QMA ++ A+ R Sbjct 355 SSVIRLKSVGNASVKRLQLYIASLVKFRERAISLDILR---QMATGALKDASTRVFPGTQ 411 Query 72 SFNCFIEDYSPPPY 85 F Y+ Y Sbjct 412 QKQVFFTVYASLLY 425 Lambda K H 0.320 0.129 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2057481480 Database: egene_temp_file_orthology_annotation_similarity_blast_database_865 Posted date: Sep 17, 2011 11:19 AM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40