bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_2434_orf1
Length=128
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_051850 serine/threonine protein phosphatase 5, puta... 66.6 2e-11
dre:571520 kif13ba, kif13b; kinesin family member 13Ba; K10392... 45.8 3e-05
hsa:6905 TBCE, HRD, KCS, KCS1, pac2; tubulin folding cofactor E 45.1 6e-05
dre:664760 tbce, MGC123075, zgc:123075; tubulin folding cofact... 44.3 9e-05
mmu:70430 Tbce, 2610206D02Rik, C530005D02Rik, pmn; tubulin-spe... 41.2 8e-04
xla:495403 tbce; tubulin folding cofactor E 40.8 0.001
dre:556653 CAP-GLY domain containing linker protein 3-like 39.7 0.002
dre:100317281 kif13bb; kinesin family member 13Bb 38.9 0.004
dre:556406 CAP-Gly domain-containing linker protein 2-like; K1... 38.5 0.005
dre:556823 cylda, cyld; cylindromatosis (turban tumor syndrome... 38.5 0.006
xla:100270681 kif13b; kinesin family member 13B; K10392 kinesi... 38.1 0.006
hsa:23303 KIF13B, GAKIN, KIAA0639; kinesin family member 13B; ... 37.7 0.010
mmu:16554 Kif13b, 5330429L19Rik, 6030414C01, AI429803, C130021... 37.4 0.012
mmu:74256 Cyld, 2010013M14Rik, 2900009M21Rik, C130039D01Rik, C... 37.0 0.014
mmu:56430 Clip1, 1110007I12Rik, 4631429H07Rik, AV017631, C8103... 37.0 0.016
tpv:TP01_0219 serine/threonine protein phosphatase; K01090 pro... 37.0 0.017
hsa:6249 CLIP1, CLIP, CLIP-170, CLIP170, CYLN1, MGC131604, RSN... 36.6 0.023
hsa:7461 CLIP2, CLIP, CLIP-115, CYLN2, KIAA0291, MGC11333, WBS... 36.2 0.024
xla:379696 dctn1, Dynactin-1, MGC68950, glued; dynactin 1; K04... 36.2 0.025
hsa:1540 CYLD, CDMT, CYLD1, CYLDI, EAC, FLJ20180, FLJ31664, FL... 35.4 0.046
dre:337350 tbcb, ckap1, ik:tdsubc_2e4, wu:fa56d03, xx:tdsubc_2... 35.0 0.053
mmu:269713 Clip2, B230327O20, CLIP-115, Clip1, Cyln2, WSCR4, m... 35.0 0.056
mmu:13191 Dctn1, AL022633, Glued, p150, p150; dynactin ... 35.0 0.058
hsa:1639 DCTN1, DAP-150, DP-150, HMN7B, P135; dynactin 1; K046... 35.0 0.058
cel:F53F4.3 hypothetical protein 34.3 0.088
dre:558622 restin-like 34.3 0.095
sce:YER007W PAC2; Microtubule effector required for tubulin he... 34.3 0.11
dre:407638 dctn1a; dynactin 1a; K04648 dynactin 1 33.9
dre:100333531 dynactin 1a-like 33.9 0.12
dre:100331282 kinesin family member 14-like; K10392 kinesin fa... 33.9 0.13
dre:100003026 dctn1b, si:ch211-132e22.1; dynactin 1b; K04648 d... 33.5 0.16
tgo:TGME49_030170 hypothetical protein 33.1 0.23
bbo:BBOV_II000920 18.m06067; variant erythrocyte surface antig... 33.1 0.24
dre:100333117 ubiquitin carboxyl-terminal hydrolase CYLD-like 32.7 0.26
cel:K07H8.1 hypothetical protein 32.7 0.31
mmu:78785 Clip4, 1700024K14Rik, 1700074B05Rik, 4833417L20Rik, ... 32.7 0.33
ath:AT3G10220 tubulin folding cofactor B 32.0 0.44
hsa:25999 CLIP3, CLIPR-59, CLIPR59, DKFZp586N1922, FLJ33413, R... 32.0 0.46
hsa:79745 CLIP4, FLJ21069, FLJ32705, RSNL2; CAP-GLY domain con... 32.0 0.50
mmu:76686 Clip3, 1500005P14Rik, AI844915, Clipr-59; CAP-GLY do... 32.0 0.51
xla:414650 hypothetical protein MGC81145 30.8 1.00
tgo:TGME49_085220 CAP-Gly domain-containing protein (EC:3.1.1.3) 30.8 1.1
xla:495693 clip3; CAP-GLY domain containing linker protein 3; ... 30.4 1.3
xla:735205 tbcb, MGC132396, ckap1; tubulin folding cofactor B 30.4 1.3
mmu:66411 Tbcb, 2410007D12Rik, AU041393, CG22, CKAPI, Ckap1; t... 30.0 1.8
cel:Y57A10A.5 hypothetical protein 29.6 2.2
cel:Y73B3B.1 hypothetical protein 29.6 2.4
hsa:9701 PPP6R2, KIAA0685, PP6R2, SAP190, SAPS2, dJ579N16.1; p... 29.6 2.5
hsa:1155 TBCB, CG22, CKAP1, CKAPI, MGC14625; tubulin folding c... 29.6 2.8
dre:562450 similar to LOC495693 protein; K10423 CAP-Gly domain... 29.3 3.6
> tgo:TGME49_051850 serine/threonine protein phosphatase 5, putative
(EC:3.1.2.15 3.1.3.16); K01090 protein phosphatase [EC:3.1.3.16]
Length=1086
Score = 66.6 bits (161), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query 45 MTVKVGDKVAVYGFPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYH 104
M +GD VAVYG A ++YVG PP+ G +G GVEF R +G++DG+
Sbjct 53 MGFSIGDVVAVYGHKAHIRYVGPLPPNP-FGKKQKVSQTG--FGVEFSDRKLGDNDGSVD 109
Query 105 GHRYFQCAPGMGRLVRAFSVKPY 127
G +YF+C GMG V +PY
Sbjct 110 GKQYFKCKLGMGLFVTENRARPY 132
> dre:571520 kif13ba, kif13b; kinesin family member 13Ba; K10392
kinesin family member 1/13/14
Length=1821
Score = 45.8 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 13/75 (17%)
Query 47 VKVGDKVAV-YGFPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
+KVG +V V TV+Y+G S+GV VGVE G +DG+ G
Sbjct 1714 LKVGGRVTVGTSKSGTVRYIGPTHFSEGVW-----------VGVELDTPS-GKNDGSVEG 1761
Query 106 HRYFQCAPGMGRLVR 120
H+YF+C PG G LVR
Sbjct 1762 HQYFRCNPGFGVLVR 1776
> hsa:6905 TBCE, HRD, KCS, KCS1, pac2; tubulin folding cofactor
E
Length=527
Score = 45.1 bits (105), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query 49 VGDKVAVYGFPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGHRY 108
+G +V V G ATV++ G PP ++GP +GVE+ G DG++ G Y
Sbjct 10 IGRRVEVNGEHATVRFAGVVPP-----------VAGPWLGVEWDNPERGKHDGSHEGTVY 58
Query 109 FQCA-PGMGRLVR 120
F+C P G +R
Sbjct 59 FKCRHPTGGSFIR 71
> dre:664760 tbce, MGC123075, zgc:123075; tubulin folding cofactor
E
Length=521
Score = 44.3 bits (103), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query 49 VGDKVAVYGFPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGHRY 108
VG +V G TV+YVG PP+ GV +GVE+ G DG++ G RY
Sbjct 7 VGRRVCCDGERGTVRYVGPVPPTAGVW-----------LGVEWDHPERGKHDGSHDGVRY 55
Query 109 FQCA-PGMGRLVR 120
F C P G VR
Sbjct 56 FTCRHPTGGSFVR 68
> mmu:70430 Tbce, 2610206D02Rik, C530005D02Rik, pmn; tubulin-specific
chaperone E
Length=524
Score = 41.2 bits (95), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query 49 VGDKVAVYGFPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGHRY 108
+G +V V G ATV++ G PP ++G +GVE+ G DG++ G Y
Sbjct 10 IGRRVEVNGEYATVRFCGAVPP-----------VAGLWLGVEWDNPERGKHDGSHEGTMY 58
Query 109 FQCA-PGMGRLVRAFSV 124
F+C P G VR V
Sbjct 59 FKCRHPTGGSFVRPSKV 75
> xla:495403 tbce; tubulin folding cofactor E
Length=522
Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query 60 ATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGHRYFQCA-PGMGRL 118
ATV+YVG PP+ G+ +GVE+ G +GT+ G +YF C+ P G
Sbjct 21 ATVRYVGNVPPTPGLW-----------LGVEWDNHLRGKHNGTHEGTKYFTCSHPTGGSF 69
Query 119 VR 120
+R
Sbjct 70 IR 71
> dre:556653 CAP-GLY domain containing linker protein 3-like
Length=299
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 18/84 (21%)
Query 42 HIKMTVKVGDKVAVYGFPA------TVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRG 95
H M +K G +V + P+ T++Y+G S +GVE
Sbjct 218 HSPMDLKTGHRVRIM-LPSGRICTGTLRYLGNMHNS-----------PDHYLGVELEMAD 265
Query 96 IGNSDGTYHGHRYFQCAPGMGRLV 119
G DGTY G RYF C PG G V
Sbjct 266 NGQHDGTYEGQRYFDCDPGYGAFV 289
> dre:100317281 kif13bb; kinesin family member 13Bb
Length=2058
Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query 60 ATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGHRYFQCAPGMGRLV 119
TV+YVG +KGV VGVE G +DG+ G YF C PG G LV
Sbjct 1957 GTVRYVGQTDFAKGVW-----------VGVELDVPA-GKNDGSVGGRHYFHCNPGYGVLV 2004
Query 120 R 120
R
Sbjct 2005 R 2005
> dre:556406 CAP-Gly domain-containing linker protein 2-like;
K10422 CAP-Gly domain-containing linker protein 2
Length=1041
Score = 38.5 bits (88), Expect = 0.005, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query 47 VKVGDKVAVYGFP-ATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
+KVGD+V V G V+YVG +KG GVE + +G +DG G
Sbjct 203 LKVGDRVLVGGTKTGVVRYVGETDFAKG-----------EWCGVELDEP-LGKNDGAVAG 250
Query 106 HRYFQCAPGMG 116
RYFQC P G
Sbjct 251 TRYFQCPPKFG 261
Score = 29.6 bits (65), Expect = 2.2, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 17/75 (22%)
Query 49 VGDKVAVYGF-PATVKYVG--TFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
VG++V V G P + Y+G F P + G VV + +G +DG+ +G
Sbjct 74 VGERVWVNGVKPGVIAYLGETQFSPGQWAG----------VVLNDL----VGKNDGSVNG 119
Query 106 HRYFQCAPGMGRLVR 120
RYF+C G R
Sbjct 120 VRYFECQALQGIFTR 134
> dre:556823 cylda, cyld; cylindromatosis (turban tumor syndrome),
a; K08601 ubiquitin thioesterase CYLD [EC:3.1.2.15]
Length=951
Score = 38.5 bits (88), Expect = 0.006, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query 47 VKVGDKVAVYGFP---ATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTY 103
++VG V V P +++VG PP L + G+E + +G +DGT+
Sbjct 465 LEVGSMVEVKENPPLCGVIRWVG-LPPG----------LQESLAGLELEEECVGCTDGTF 513
Query 104 HGHRYFQCAPGMGRLVRAFSVKPYS 128
G RYF C P V+ +P S
Sbjct 514 KGIRYFTCPPKKALFVKLKCCRPDS 538
Score = 35.4 bits (80), Expect = 0.049, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query 41 SHIKMTVKVGDKVAVYGFPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEF--HKRGIGN 98
S +++ ++ GD+ P V++ G P + LSG GVE RG G
Sbjct 125 SKVRVQLRSGDE----PLPGVVRFKGALLPDRA--------LSGIWFGVELLEEGRGQGF 172
Query 99 SDGTYHGHRYFQCAPGMGRLV 119
++G+Y G + F+C G V
Sbjct 173 TEGSYQGQQLFRCEDECGVFV 193
> xla:100270681 kif13b; kinesin family member 13B; K10392 kinesin
family member 1/13/14
Length=1937
Score = 38.1 bits (87), Expect = 0.006, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query 29 EYLNHIDTPQLSSHIKMTVKVGDKVAV-YGFPATVKYVGTFPPSKGVGGTGAAHLSGPVV 87
E ++ D PQ + +K G+ V V V+YVG +GV V
Sbjct 1786 EEMSDSDEPQ---EVPEWLKEGEYVTVGSNKNGIVRYVGPADFQEGVW-----------V 1831
Query 88 GVEFHKRGIGNSDGTYHGHRYFQCAPGMGRLVRAFSVKPYS 128
GVE G +DG+ G YF+C PG G LVR VK S
Sbjct 1832 GVELETPA-GKNDGSVGGKHYFKCNPGYGVLVRPNRVKKAS 1871
> hsa:23303 KIF13B, GAKIN, KIAA0639; kinesin family member 13B;
K10392 kinesin family member 1/13/14
Length=1826
Score = 37.7 bits (86), Expect = 0.010, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query 73 GVGGTGAAHLSGPV-------VGVEFHKRGIGNSDGTYHGHRYFQCAPGMGRLVRAFSVK 125
G TG GP VGVE G +DG+ G +YF+C PG G LVR V+
Sbjct 1710 GAHKTGVVRYVGPADFQEGTWVGVELDLPS-GKNDGSIGGKQYFRCNPGYGLLVRPSRVR 1768
> mmu:16554 Kif13b, 5330429L19Rik, 6030414C01, AI429803, C130021D12Rik,
GAKIN; kinesin family member 13B; K10392 kinesin family
member 1/13/14
Length=1843
Score = 37.4 bits (85), Expect = 0.012, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query 73 GVGGTGAAHLSGPV-------VGVEFHKRGIGNSDGTYHGHRYFQCAPGMGRLVRAFSVK 125
G TG GP +GVE G +DG+ G +YF+C PG G LVR V+
Sbjct 1726 GTNKTGIVRYIGPTDFQEGTWIGVELDLPA-GKNDGSIGGKQYFRCNPGYGLLVRPSRVR 1784
> mmu:74256 Cyld, 2010013M14Rik, 2900009M21Rik, C130039D01Rik,
CDMT, CYLD1, EAC, mKIAA0849; cylindromatosis (turban tumor
syndrome) (EC:3.4.19.12); K08601 ubiquitin thioesterase CYLD
[EC:3.1.2.15]
Length=955
Score = 37.0 bits (84), Expect = 0.014, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 11/71 (15%)
Query 58 FPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGHRYFQCAPGMGR 117
F ++++G PP LS + G+E G +DGT+ G RYF CA
Sbjct 483 FYGVIRWIGQ-PPG----------LSDVLAGLELEDECAGCTDGTFRGTRYFTCALKKAL 531
Query 118 LVRAFSVKPYS 128
V+ S +P S
Sbjct 532 FVKLKSCRPDS 542
Score = 35.8 bits (81), Expect = 0.037, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query 39 LSSHIKMTVKVGDKVAVYGFPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEF--HKRGI 96
+ S +K+ ++ G++ FP V++ G + V SG GVE RG
Sbjct 127 VGSPVKVQLRSGEE----KFPGVVRFRGPLLAERTV--------SGIFFGVELLEEGRGQ 174
Query 97 GNSDGTYHGHRYFQCAPGMGRLV 119
G +DG Y G + FQC G V
Sbjct 175 GFTDGVYQGKQLFQCDEDCGVFV 197
> mmu:56430 Clip1, 1110007I12Rik, 4631429H07Rik, AV017631, C81039,
CLIP-170, CLIP170, CYLN1, Clip50, KIAA4046, Rsn, mKIAA4046,
restin; CAP-GLY domain containing linker protein 1; K10421
CAP-Gly domain-containing linker protein 1
Length=1391
Score = 37.0 bits (84), Expect = 0.016, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query 47 VKVGDKVAVYGFPA-TVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
+KVGD+V V G A V+++G +KG GVE + +G +DG G
Sbjct 211 LKVGDRVLVGGTKAGVVRFLGETDFAKG-----------EWCGVELDEP-LGKNDGAVAG 258
Query 106 HRYFQCAPGMG 116
RYFQC P G
Sbjct 259 TRYFQCQPKYG 269
Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 17/76 (22%)
Query 48 KVGDKVAVYGF-PATVKYVG--TFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYH 104
+VG++V V G P ++++G F P + G L P IG +DG+
Sbjct 59 RVGERVWVNGNKPGFIQFLGETQFAPGQWAGIV----LDEP----------IGKNDGSVA 104
Query 105 GHRYFQCAPGMGRLVR 120
G RYFQC P G R
Sbjct 105 GVRYFQCEPLKGIFTR 120
> tpv:TP01_0219 serine/threonine protein phosphatase; K01090 protein
phosphatase [EC:3.1.3.16]
Length=935
Score = 37.0 bits (84), Expect = 0.017, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query 47 VKVGDKVAVYGFPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGH 106
V + D+V VYGF VKY+G K G L VGVE K+ ++G +G
Sbjct 4 VNLNDQVMVYGFKGVVKYIGKKEYIKRPNGNVVNQL----VGVELVKKLPQCTNGNLNGT 59
Query 107 RYFQCAPGMGRLVRAFSVKPY 127
F+ + S+KPY
Sbjct 60 NLFKSNDETAIFIPLESLKPY 80
> hsa:6249 CLIP1, CLIP, CLIP-170, CLIP170, CYLN1, MGC131604, RSN;
CAP-GLY domain containing linker protein 1; K10421 CAP-Gly
domain-containing linker protein 1
Length=1427
Score = 36.6 bits (83), Expect = 0.023, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query 47 VKVGDKVAVYGFPA-TVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
+K+GD+V V G A V+++G +KG GVE + +G +DG G
Sbjct 212 LKIGDRVLVGGTKAGVVRFLGETDFAKG-----------EWCGVELDEP-LGKNDGAVAG 259
Query 106 HRYFQCAPGMG 116
RYFQC P G
Sbjct 260 TRYFQCQPKYG 270
Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 17/76 (22%)
Query 48 KVGDKVAVYGF-PATVKYVG--TFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYH 104
+VG++V V G P ++++G F P + G L P IG +DG+
Sbjct 59 RVGERVWVNGNKPGFIQFLGETQFAPGQWAGIV----LDEP----------IGKNDGSVA 104
Query 105 GHRYFQCAPGMGRLVR 120
G RYFQC P G R
Sbjct 105 GVRYFQCEPLKGIFTR 120
> hsa:7461 CLIP2, CLIP, CLIP-115, CYLN2, KIAA0291, MGC11333, WBSCR3,
WBSCR4, WSCR3, WSCR4; CAP-GLY domain containing linker
protein 2; K10422 CAP-Gly domain-containing linker protein
2
Length=1046
Score = 36.2 bits (82), Expect = 0.024, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query 47 VKVGDKVAVYGFP-ATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
+++GD+V V G V+YVG +KG GVE + +G +DG G
Sbjct 219 LRLGDRVLVGGTKTGVVRYVGETDFAKG-----------EWCGVELDEP-LGKNDGAVAG 266
Query 106 HRYFQCAPGMG 116
RYFQC P G
Sbjct 267 TRYFQCPPKFG 277
Score = 31.6 bits (70), Expect = 0.70, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 17/75 (22%)
Query 49 VGDKVAVYGF-PATVKYVG--TFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
VG++V V G P V+Y+G F P + G L PV G +DG G
Sbjct 81 VGERVWVNGVKPGVVQYLGETQFAPGQWAGVV----LDDPV----------GKNDGAVGG 126
Query 106 HRYFQCAPGMGRLVR 120
RYF+C G R
Sbjct 127 VRYFECPALQGIFTR 141
> xla:379696 dctn1, Dynactin-1, MGC68950, glued; dynactin 1; K04648
dynactin 1
Length=1232
Score = 36.2 bits (82), Expect = 0.025, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 14/81 (17%)
Query 47 VKVGDKVAVYG--FPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYH 104
+KVG +V V G + TV YVG +G VGV G +DGT
Sbjct 10 LKVGSRVEVIGKGYRGTVAYVG-----------ATLFATGKWVGVILDDSK-GKNDGTVQ 57
Query 105 GHRYFQCAPGMGRLVRAFSVK 125
G RYF C G VR ++
Sbjct 58 GRRYFTCEENHGIFVRQSQIQ 78
> hsa:1540 CYLD, CDMT, CYLD1, CYLDI, EAC, FLJ20180, FLJ31664,
FLJ78684, KIAA0849, MFT, MFT1, SBS, TEM, USPL2; cylindromatosis
(turban tumor syndrome) (EC:3.4.19.12); K08601 ubiquitin
thioesterase CYLD [EC:3.1.2.15]
Length=953
Score = 35.4 bits (80), Expect = 0.046, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 11/71 (15%)
Query 58 FPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGHRYFQCAPGMGR 117
F ++++G PP L+ + G+E G +DGT+ G RYF CA
Sbjct 481 FYGVIRWIGQ-PPG----------LNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKAL 529
Query 118 LVRAFSVKPYS 128
V+ S +P S
Sbjct 530 FVKLKSCRPDS 540
Score = 35.0 bits (79), Expect = 0.064, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query 47 VKVGDKVAVYGFPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEF--HKRGIGNSDGTYH 104
VKV + FP V++ G + V SG GVE RG G +DG Y
Sbjct 131 VKVQLRSGEEKFPGVVRFRGPLLAERTV--------SGIFFGVELLEEGRGQGFTDGVYQ 182
Query 105 GHRYFQCAPGMGRLV 119
G + FQC G V
Sbjct 183 GKQLFQCDEDCGVFV 197
> dre:337350 tbcb, ckap1, ik:tdsubc_2e4, wu:fa56d03, xx:tdsubc_2e4,
zgc:55620; tubulin folding cofactor B
Length=246
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 16/66 (24%)
Query 61 TVKYVGT--FPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGHRYFQCAPGMGRL 118
TV YVGT F P G VGV++ + +G DG+ +G RYF+C P G
Sbjct 180 TVMYVGTADFKP-------------GYWVGVKYDE-PLGKHDGSVNGKRYFECEPKYGAF 225
Query 119 VRAFSV 124
V+ +V
Sbjct 226 VKPLTV 231
> mmu:269713 Clip2, B230327O20, CLIP-115, Clip1, Cyln2, WSCR4,
mKIAA0291, wbscr4; CAP-GLY domain containing linker protein
2; K10422 CAP-Gly domain-containing linker protein 2
Length=1012
Score = 35.0 bits (79), Expect = 0.056, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query 47 VKVGDKVAVYGFP-ATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
+ +GD+V V G V+YVG +KG GVE + +G +DG G
Sbjct 220 LHLGDRVLVGGTKTGVVRYVGETDFAKG-----------EWCGVELDEP-LGKNDGAVAG 267
Query 106 HRYFQCAPGMG 116
RYFQC P G
Sbjct 268 TRYFQCPPKFG 278
Score = 31.6 bits (70), Expect = 0.70, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 17/75 (22%)
Query 49 VGDKVAVYGF-PATVKYVG--TFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
VG++V V G P V+Y+G F P + G L PV G +DG G
Sbjct 82 VGERVWVNGVKPGVVQYLGETQFAPGQWAGVV----LDDPV----------GKNDGAVGG 127
Query 106 HRYFQCAPGMGRLVR 120
RYF+C G R
Sbjct 128 VRYFECPALQGIFTR 142
> mmu:13191 Dctn1, AL022633, Glued, p150, p150; dynactin
1; K04648 dynactin 1
Length=1264
Score = 35.0 bits (79), Expect = 0.058, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query 47 VKVGDKVAVYG--FPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYH 104
++VG +V V G TV YVG +G VGV + G +DGT
Sbjct 10 LRVGSRVEVIGKGHRGTVAYVG-----------ATLFATGKWVGVILDE-AKGKNDGTVQ 57
Query 105 GHRYFQCAPGMGRLVRAFSVKPY 127
G +YF C G G VR ++ +
Sbjct 58 GRKYFTCDEGHGIFVRQSQIQVF 80
> hsa:1639 DCTN1, DAP-150, DP-150, HMN7B, P135; dynactin 1; K04648
dynactin 1
Length=1253
Score = 35.0 bits (79), Expect = 0.058, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query 47 VKVGDKVAVYG--FPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYH 104
++VG +V V G TV YVG +G VGV + G +DGT
Sbjct 27 LRVGSRVEVIGKGHRGTVAYVG-----------ATLFATGKWVGVILDE-AKGKNDGTVQ 74
Query 105 GHRYFQCAPGMGRLVRAFSVKPY 127
G +YF C G G VR ++ +
Sbjct 75 GRKYFTCDEGHGIFVRQSQIQVF 97
> cel:F53F4.3 hypothetical protein
Length=229
Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query 83 SGPVVGVEFHKRGIGNSDGTYHGHRYFQCAPGMGRLVRAFSVK 125
G VGV++ + +G +DG+ G RYF C P G VR VK
Sbjct 176 EGVWVGVKYDE-PVGKNDGSVAGVRYFDCDPKYGGFVRPVDVK 217
> dre:558622 restin-like
Length=812
Score = 34.3 bits (77), Expect = 0.095, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 17/76 (22%)
Query 48 KVGDKVAVYGF-PATVKYVG--TFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYH 104
KVGD+V V G P V+++G F P + G L P IG +DG+
Sbjct 53 KVGDRVWVNGNKPGVVQFLGETQFAPGQWAGIV----LDEP----------IGKNDGSVS 98
Query 105 GHRYFQCAPGMGRLVR 120
G RYFQC G R
Sbjct 99 GVRYFQCEALRGIFTR 114
Score = 34.3 bits (77), Expect = 0.097, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query 47 VKVGDKVAVYGFPA-TVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
+K+ D+V V G A V+++G +KG GVE + +G +DG G
Sbjct 171 LKINDRVLVAGSKAGVVRFLGETDFAKG-----------EWCGVELDEP-LGKNDGAVAG 218
Query 106 HRYFQCAPGMG 116
RYFQC P G
Sbjct 219 TRYFQCQPKYG 229
> sce:YER007W PAC2; Microtubule effector required for tubulin
heterodimer formation, binds alpha-tubulin, required for normal
microtubule function, null mutant exhibits cold-sensitive
microtubules and sensitivity to benomyl
Length=518
Score = 34.3 bits (77), Expect = 0.11, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 11/82 (13%)
Query 45 MTVKVGDKVAVYGFPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYH 104
MT ++GD++ + G+ T+K++G P V GVE+ G GT
Sbjct 1 MTYEIGDRLKIGGYFCTIKFIGVIKPWPSV----------KAYGVEWDDHSRGKHSGTID 50
Query 105 GHRYFQCA-PGMGRLVRAFSVK 125
YF P G ++ +K
Sbjct 51 DIHYFDVQIPNSGSFLKESKIK 72
> dre:407638 dctn1a; dynactin 1a; K04648 dynactin 1
Length=1218
Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 14/81 (17%)
Query 47 VKVGDKVAVYGF--PATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYH 104
VKVG V V G TV Y+G SG VGV + G +DGT
Sbjct 10 VKVGSVVEVIGKGQRGTVAYIG-----------ATLFASGKWVGVILDE-AKGKNDGTVQ 57
Query 105 GHRYFQCAPGMGRLVRAFSVK 125
G RYF C G VR ++
Sbjct 58 GKRYFTCEENHGIFVRQSQIQ 78
> dre:100333531 dynactin 1a-like
Length=1218
Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 14/81 (17%)
Query 47 VKVGDKVAVYGF--PATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYH 104
VKVG V V G TV Y+G SG VGV + G +DGT
Sbjct 10 VKVGSVVEVIGKGQRGTVAYIG-----------ATLFASGKWVGVILDE-AKGKNDGTVQ 57
Query 105 GHRYFQCAPGMGRLVRAFSVK 125
G RYF C G VR ++
Sbjct 58 GKRYFTCEENHGIFVRQSQIQ 78
> dre:100331282 kinesin family member 14-like; K10392 kinesin
family member 1/13/14
Length=1832
Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query 50 GDKVAVYGFPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGHRYF 109
G++V V V YVG +KG+ VGVE +G +GT G YF
Sbjct 1754 GEQVWVGKQSGMVHYVGGVEFAKGIW-----------VGVEL-DLAVGKHNGTVKGRVYF 1801
Query 110 QCAPGMGRLVR 120
+CA G G V+
Sbjct 1802 RCATGHGVFVK 1812
> dre:100003026 dctn1b, si:ch211-132e22.1; dynactin 1b; K04648
dynactin 1
Length=1226
Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 14/81 (17%)
Query 47 VKVGDKVAVYG--FPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYH 104
VKVG V V G TV Y+G SG VGV + G +DGT
Sbjct 10 VKVGSLVEVIGKGHRGTVAYIGN-----------TLFASGKWVGVILDEPK-GKNDGTVQ 57
Query 105 GHRYFQCAPGMGRLVRAFSVK 125
G RYF C G VR ++
Sbjct 58 GKRYFLCQENHGIFVRQSQIQ 78
> tgo:TGME49_030170 hypothetical protein
Length=1656
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
Query 48 KVGDKVAVYGFPATVKYVGT--------FPPSKGVGG---TGAAHLSGPVVGVE-FHKRG 95
V D V+G+P + + T PPS GV G G++ +S P G RG
Sbjct 307 DVSDPNGVFGWPGSRRSSHTSWGTSSTCCPPSAGVAGHVHDGSSLMSAPQAGQGGLTTRG 366
Query 96 IGNSDGTYHGHRYFQCAPGMGRL 118
G + GT H Y C P G++
Sbjct 367 AGPAGGTLHCQPYAMCRPASGQV 389
> bbo:BBOV_II000920 18.m06067; variant erythrocyte surface antigen-1,
alpha subunit
Length=309
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query 20 YRGSAFFPLEYLNHIDTPQLSSHIKMTVKVGDKVAVYGFPAT-----VKYVGTFPPSKGV 74
+RG PL+ N + + HIK T + GD + G+ A+ VK +G P
Sbjct 62 FRGGVGNPLKGKNKGNQEKACEHIKDTSQKGDDDYLCGWCASGLRDEVKKIGWIPKKDND 121
Query 75 GGTGAAHLSGPVVGVEFHKRGIGNS 99
GG + + ++ ++ +K +G +
Sbjct 122 GGQYRSTVGQALIDIKGNKGAVGTT 146
> dre:100333117 ubiquitin carboxyl-terminal hydrolase CYLD-like
Length=600
Score = 32.7 bits (73), Expect = 0.26, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 0/36 (0%)
Query 85 PVVGVEFHKRGIGNSDGTYHGHRYFQCAPGMGRLVR 120
PV G+E + +DG+Y G R+F+C G V+
Sbjct 160 PVAGIELDQELSAATDGSYLGERHFRCPANKGLFVK 195
> cel:K07H8.1 hypothetical protein
Length=493
Score = 32.7 bits (73), Expect = 0.31, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query 47 VKVGDKVAVYGFPATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGH 106
+++G +V + ATV+Y+G V G G+ VG+E+ G DG G
Sbjct 1 MEIGQRVRINFEVATVRYIGE------VDGYGSQRW----VGLEWDDPTRGKHDGIVRGK 50
Query 107 RYFQCA-PGMGRLVR 120
RYFQ P G L++
Sbjct 51 RYFQTRHPNGGSLMK 65
> mmu:78785 Clip4, 1700024K14Rik, 1700074B05Rik, 4833417L20Rik,
5830409B12Rik, Rsnl2; CAP-GLY domain containing linker protein
family, member 4; K10423 CAP-Gly domain-containing linker
protein 3/4
Length=704
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query 60 ATVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGHRYFQCAPGMGRLV 119
ATV+YVG P+ SG +G+E + G +DG RYF C P G LV
Sbjct 637 ATVRYVG---PTD--------FASGIWLGLEL-RSAKGKNDGAVGDKRYFTCKPNYGVLV 684
Query 120 R 120
R
Sbjct 685 R 685
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query 47 VKVGDKVAVYGFPA-TVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
+K+GD+V + G T+++ GT SG G+E + G ++G+
Sbjct 283 LKLGDRVVIAGQKVGTLRFCGT-----------TEFASGQWAGIELDEPE-GKNNGSVGR 330
Query 106 HRYFQCAPGMG 116
+YF+CAP G
Sbjct 331 VQYFKCAPKYG 341
Score = 27.7 bits (60), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 17/80 (21%)
Query 40 SSHIKMTVKVGDKVAVYGFPA-TVKYVGT--FPPSKGVGGTGAAHLSGPVVGVEFHKRGI 96
+SH + + +G++V V G T+K+ GT F P G G+E K
Sbjct 477 NSHHEGALHLGERVLVVGQRVGTIKFFGTTNFAP-------------GYWYGIELEKPH- 522
Query 97 GNSDGTYHGHRYFQCAPGMG 116
G +DG+ G +YF C+P G
Sbjct 523 GKNDGSVGGVQYFSCSPRYG 542
> ath:AT3G10220 tubulin folding cofactor B
Length=243
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 17/84 (20%)
Query 46 TVKVGDKVAVY--GFPATVKYVGTFPPSKGVGGTGAAHLSGP--VVGVEFHKRGIGNSDG 101
+KVGD+ V VKYVG A GP VG+++ + +G DG
Sbjct 158 NIKVGDRCQVEPGEKRGMVKYVGR------------AESLGPGYWVGIQYDE-PLGKHDG 204
Query 102 TYHGHRYFQCAPGMGRLVRAFSVK 125
G R+F+C G +VR VK
Sbjct 205 MVKGTRFFECPRLQGGMVRPDKVK 228
> hsa:25999 CLIP3, CLIPR-59, CLIPR59, DKFZp586N1922, FLJ33413,
RSNL1; CAP-GLY domain containing linker protein 3; K10423 CAP-Gly
domain-containing linker protein 3/4
Length=547
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query 47 VKVGDKVAVYGFPA-TVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
+++GD+V + G T+++ GT SG VGVE + G +DG+ G
Sbjct 294 LRLGDRVLLDGQKTGTLRFCGT-----------TEFASGQWVGVELDEPE-GKNDGSVGG 341
Query 106 HRYFQCAPGMG 116
RYF C P G
Sbjct 342 VRYFICPPKQG 352
> hsa:79745 CLIP4, FLJ21069, FLJ32705, RSNL2; CAP-GLY domain containing
linker protein family, member 4; K10423 CAP-Gly domain-containing
linker protein 3/4
Length=705
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query 83 SGPVVGVEFHKRGIGNSDGTYHGHRYFQCAPGMGRLVR 120
SG +G+E + G +DG+ RYF C P G LVR
Sbjct 650 SGIWLGLEL-RSAKGKNDGSVGDKRYFTCKPNHGVLVR 686
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query 47 VKVGDKVAVYGFPA-TVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
+K+GD+V + G T+++ GT SG G+E + G ++G+
Sbjct 283 LKLGDRVVIAGQKVGTLRFCGT-----------TEFASGQWAGIELDEPE-GKNNGSVGK 330
Query 106 HRYFQCAPGMG 116
+YF+CAP G
Sbjct 331 VQYFKCAPKYG 341
> mmu:76686 Clip3, 1500005P14Rik, AI844915, Clipr-59; CAP-GLY
domain containing linker protein 3; K10423 CAP-Gly domain-containing
linker protein 3/4
Length=547
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query 47 VKVGDKVAVYGFPA-TVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHG 105
+++GD+V + G T+++ GT SG VGVE + G +DG+ G
Sbjct 294 LRLGDRVLLDGQKTGTLRFCGT-----------TEFASGQWVGVELDEPE-GKNDGSVGG 341
Query 106 HRYFQCAPGMG 116
RYF C P G
Sbjct 342 VRYFICPPKQG 352
> xla:414650 hypothetical protein MGC81145
Length=246
Score = 30.8 bits (68), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 19/74 (25%)
Query 52 KVAVYGFPA---TVKYVG--TFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGH 106
+V V G P TV YVG F P G VGV++ + +G +DG+ G
Sbjct 167 EVRVAGQPTKRGTVMYVGLTDFKP-------------GFWVGVQYDE-PLGKNDGSVEGK 212
Query 107 RYFQCAPGMGRLVR 120
+YF C P G V+
Sbjct 213 QYFTCMPKYGAFVK 226
> tgo:TGME49_085220 CAP-Gly domain-containing protein (EC:3.1.1.3)
Length=781
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 16/84 (19%)
Query 41 SHIKMTVKVGDKVA-VYGFPATVKYVGTFPPSKGVGGTGAAHLSGPV------------V 87
S ++ T GD+VA + G TV+Y+G P +G A+ +
Sbjct 39 SPLRCTYTPGDRVADLDGHLGTVRYIG---PVEGYSRRTASASYETSSSSSLCEDAELWI 95
Query 88 GVEFHKRGIGNSDGTYHGHRYFQC 111
G+E+ G G DG+ +G YF C
Sbjct 96 GIEWDDAGRGKHDGSLNGKVYFSC 119
> xla:495693 clip3; CAP-GLY domain containing linker protein 3;
K10423 CAP-Gly domain-containing linker protein 3/4
Length=534
Score = 30.4 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query 45 MTVKVGDKVAVYGFPA-TVKYVGTFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTY 103
+ +K+GD++ + A T+++ GT SG VGVE + G +DG+
Sbjct 282 LGLKLGDRILLDAEKAGTLRFCGT-----------TEFASGQWVGVELDEPD-GKNDGSV 329
Query 104 HGHRYFQCAPGMG 116
G RYF C P G
Sbjct 330 GGIRYFICPPKQG 342
> xla:735205 tbcb, MGC132396, ckap1; tubulin folding cofactor
B
Length=246
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 19/74 (25%)
Query 52 KVAVYGFPA---TVKYVG--TFPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTYHGH 106
+V V G P TV YVG F P G VGV++ + +G +DG+ G
Sbjct 167 EVRVAGQPTKRGTVMYVGLTDFKP-------------GYWVGVKYDE-PLGKNDGSVEGK 212
Query 107 RYFQCAPGMGRLVR 120
+YF C P G V+
Sbjct 213 QYFTCMPKYGAFVK 226
> mmu:66411 Tbcb, 2410007D12Rik, AU041393, CG22, CKAPI, Ckap1;
tubulin folding cofactor B
Length=244
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query 87 VGVEFHKRGIGNSDGTYHGHRYFQCAPGMGRLVRAFSV 124
VGV + + +G +DG+ +G RYF+C G V+ +V
Sbjct 193 VGVRYDE-PLGKNDGSVNGKRYFECQAKYGAFVKPSAV 229
> cel:Y57A10A.5 hypothetical protein
Length=571
Score = 29.6 bits (65), Expect = 2.2, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query 85 PVVGVEFHKR-----GIGNSDGTYHGHRYFQCAPGMGRLV 119
PVV + + G G +DG Y+ Y Q AP M +LV
Sbjct 156 PVVATKLFREFSELEGEGRTDGVYYKRFYNQLAPNMAKLV 195
> cel:Y73B3B.1 hypothetical protein
Length=376
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query 85 PVVGVEFHKR-----GIGNSDGTYHGHRYFQCAPGMGRLV 119
PVV + + G G +DG Y+ Y Q AP M +LV
Sbjct 97 PVVAAKLFREFSELEGEGRTDGVYYKRFYNQLAPNMAKLV 136
> hsa:9701 PPP6R2, KIAA0685, PP6R2, SAP190, SAPS2, dJ579N16.1;
protein phosphatase 6, regulatory subunit 2
Length=932
Score = 29.6 bits (65), Expect = 2.5, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query 34 IDTPQLSSHIKMTVKVGDKVAVYGFPATVKYVGTFPPSKGVGGTGA----AHLSGPV 86
I TP +SS + + V +G +AV PA V +GT G T A A L+GPV
Sbjct 879 IPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTKD---GKTDAPPEGAALNGPV 932
> hsa:1155 TBCB, CG22, CKAP1, CKAPI, MGC14625; tubulin folding
cofactor B
Length=244
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query 87 VGVEFHKRGIGNSDGTYHGHRYFQCAPGMGRLVR 120
+GV + + +G +DG+ +G RYF+C G V+
Sbjct 193 IGVRYDE-PLGKNDGSVNGKRYFECQAKYGAFVK 225
> dre:562450 similar to LOC495693 protein; K10423 CAP-Gly domain-containing
linker protein 3/4
Length=537
Score = 29.3 bits (64), Expect = 3.6, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 17/73 (23%)
Query 47 VKVGDKVAVYGFP-ATVKYVGT--FPPSKGVGGTGAAHLSGPVVGVEFHKRGIGNSDGTY 103
V+VGD+V V G V++ G F P G GVE ++ G DG+
Sbjct 406 VEVGDQVLVAGQKQGIVRFFGKTDFAP-------------GYWFGVEL-EQPTGKHDGSV 451
Query 104 HGHRYFQCAPGMG 116
G RYF C P G
Sbjct 452 FGVRYFHCLPKYG 464
Lambda K H
0.322 0.139 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2049573556
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40