bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_2541_orf1
Length=109
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_060240 CCR4-NOT transcription complex subunit, puta... 166 2e-41
pfa:MAL8P1.104 CAF1 family ribonuclease, putative; K12581 CCR4... 145 4e-35
bbo:BBOV_III006830 17.m07605; CAF1 family ribonuclease contain... 137 7e-33
tpv:TP04_0580 hypothetical protein; K12581 CCR4-NOT transcript... 123 1e-28
xla:734751 cnot7, MGC130876, caf1; CCR4-NOT transcription comp... 109 2e-24
hsa:29883 CNOT7, CAF1, hCAF-1; CCR4-NOT transcription complex,... 108 4e-24
mmu:18983 Cnot7, AU022737, Caf1, Pop2; CCR4-NOT transcription ... 108 4e-24
dre:406788 cnot8, wu:fe49a05, zgc:63844; CCR4-NOT transcriptio... 108 4e-24
dre:100334227 CCR4-NOT transcription complex, subunit 8-like 108 6e-24
ath:AT2G32070 CCR4-NOT transcription complex protein, putative 107 1e-23
cpv:cgd3_350 Pop2p-like 3'5' exonuclease, CCR4-NOT transcripti... 106 1e-23
hsa:9337 CNOT8, CAF1, CALIF, POP2, hCAF1; CCR4-NOT transcripti... 106 2e-23
mmu:69125 Cnot8, 1500015I04Rik, 1810022F04Rik, AA536816, AU015... 106 2e-23
xla:379811 cnot8, MGC52767; CCR4-NOT transcription complex, su... 106 2e-23
dre:768119 cnot7, CAF1, fd59c07, fj07d05, wu:fd59c07, wu:fj07d... 105 3e-23
ath:AT1G80780 CCR4-NOT transcription complex protein, putative... 105 5e-23
ath:AT1G15920 CCR4-NOT transcription complex protein, putative 92.8 2e-19
ath:AT5G10960 CCR4-NOT transcription complex protein, putative... 91.3 6e-19
cel:Y56A3A.20 ccf-1; yeast CCR4 Associated Factor family membe... 84.0 1e-16
ath:AT5G22250 CCR4-NOT transcription complex protein, putative 74.3 8e-14
ath:AT3G44260 CCR4-NOT transcription complex protein, putative 69.3 3e-12
ath:AT1G61470 CCR4-NOT transcription complex protein, putative 65.9 3e-11
ath:AT3G44240 CCR4-NOT transcription complex protein, putative 65.1 6e-11
ath:AT1G27820 CCR4-NOT transcription complex protein, putative 64.3 9e-11
ath:AT1G27890 CCR4-NOT transcription complex protein, putative 62.8 3e-10
ath:AT1G06450 CCR4-NOT transcription complex protein, putative 58.5 5e-09
sce:YNR052C POP2, CAF1; Pop2p (EC:3.1.13.4); K12581 CCR4-NOT t... 48.5 5e-06
mmu:11787 Apbb2, 2310007D03Rik, FE65L1, Rirl1, TR2L, Zfra; amy... 28.9 4.6
bbo:BBOV_II007020 18.m06581; CAF1 family ribonuclease containi... 28.5 6.2
tgo:TGME49_115580 hypothetical protein 27.7 9.1
> tgo:TGME49_060240 CCR4-NOT transcription complex subunit, putative
(EC:3.1.13.4); K12581 CCR4-NOT transcription complex
subunit 7/8
Length=617
Score = 166 bits (419), Expect = 2e-41, Method: Composition-based stats.
Identities = 75/101 (74%), Positives = 82/101 (81%), Gaps = 0/101 (0%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNL 60
NEDVKWISFHGCYDFGYL+KLLTC LP SE FFEL+ DF PSLYDIK+LLR + NFNL
Sbjct 144 NEDVKWISFHGCYDFGYLLKLLTCAPLPHSEAQFFELLHDFFPSLYDIKYLLRSIHNFNL 203
Query 61 SQGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLILWNL 101
S G SLQK++E L V R+GPQHQAGSDSLVTC TF L L
Sbjct 204 SGGCSLQKIAEHLQVTRVGPQHQAGSDSLVTCRTFFKLVEL 244
> pfa:MAL8P1.104 CAF1 family ribonuclease, putative; K12581 CCR4-NOT
transcription complex subunit 7/8
Length=1774
Score = 145 bits (365), Expect = 4e-35, Method: Composition-based stats.
Identities = 70/101 (69%), Positives = 81/101 (80%), Gaps = 0/101 (0%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNL 60
NEDVKWISFHGCYDF YL+K+LTC +LP +E AFFEL+ DF PSLYDIK+LL +L L
Sbjct 139 NEDVKWISFHGCYDFAYLLKILTCSALPHNEAAFFELLNDFFPSLYDIKYLLLNLNIKQL 198
Query 61 SQGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLILWNL 101
S+ SLQK+SE L+VKRIG QHQAGSDSLVTC TF L +
Sbjct 199 SRTFSLQKISEILSVKRIGRQHQAGSDSLVTCKTFFKLMEM 239
> bbo:BBOV_III006830 17.m07605; CAF1 family ribonuclease containing
protein; K12581 CCR4-NOT transcription complex subunit
7/8
Length=374
Score = 137 bits (346), Expect = 7e-33, Method: Composition-based stats.
Identities = 63/98 (64%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNL 60
NEDV W+SFHG YDF Y++KLLTC +LP +++ FF+L+ DF PSLYDIK+LL D + L
Sbjct 140 NEDVVWVSFHGSYDFAYVLKLLTCTTLPTNQSDFFDLLHDFFPSLYDIKYLL-DERSIKL 198
Query 61 SQGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLIL 98
+ SSLQ+++E L+VKRIGPQHQAGSDSLVTC TF L
Sbjct 199 TSRSSLQRIAEHLDVKRIGPQHQAGSDSLVTCRTFFKL 236
> tpv:TP04_0580 hypothetical protein; K12581 CCR4-NOT transcription
complex subunit 7/8
Length=562
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNL 60
NE++ WISFHG YDF YL+KLLTC +LP +++ FFEL+ DF PSLYDIKFLL D + L
Sbjct 140 NEEIVWISFHGSYDFAYLLKLLTCTNLPSNQSLFFELLHDFFPSLYDIKFLL-DERSIEL 198
Query 61 SQGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLIL 98
S SLQK+++ L+VKR+G QHQAGSDSLVT TF L
Sbjct 199 SGRLSLQKLADHLDVKRVGLQHQAGSDSLVTSRTFFKL 236
> xla:734751 cnot7, MGC130876, caf1; CCR4-NOT transcription complex,
subunit 7; K12581 CCR4-NOT transcription complex subunit
7/8
Length=285
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 70/102 (68%), Gaps = 4/102 (3%)
Query 2 EDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNLS 61
E VKW+SFH YDFGYL+K+LT +LPE E FFE+++ F P +YD+K+L++ N
Sbjct 149 EGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEILRLFFPVIYDVKYLMKSCKNLK-- 206
Query 62 QGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLILWNLIL 103
LQ+V+EQL ++RIGPQHQAGSDSL+T F + +
Sbjct 207 --GGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFF 246
> hsa:29883 CNOT7, CAF1, hCAF-1; CCR4-NOT transcription complex,
subunit 7; K12581 CCR4-NOT transcription complex subunit
7/8
Length=285
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 70/102 (68%), Gaps = 4/102 (3%)
Query 2 EDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNLS 61
E VKW+SFH YDFGYL+K+LT +LPE E FFE+++ F P +YD+K+L++ N
Sbjct 149 EGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLK-- 206
Query 62 QGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLILWNLIL 103
LQ+V+EQL ++RIGPQHQAGSDSL+T F + +
Sbjct 207 --GGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFF 246
> mmu:18983 Cnot7, AU022737, Caf1, Pop2; CCR4-NOT transcription
complex, subunit 7; K12581 CCR4-NOT transcription complex
subunit 7/8
Length=285
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 70/102 (68%), Gaps = 4/102 (3%)
Query 2 EDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNLS 61
E VKW+SFH YDFGYL+K+LT +LPE E FFE+++ F P +YD+K+L++ N
Sbjct 149 EGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLK-- 206
Query 62 QGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLILWNLIL 103
LQ+V+EQL ++RIGPQHQAGSDSL+T F + +
Sbjct 207 --GGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFF 246
> dre:406788 cnot8, wu:fe49a05, zgc:63844; CCR4-NOT transcription
complex, subunit 8; K12581 CCR4-NOT transcription complex
subunit 7/8
Length=285
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 70/100 (70%), Gaps = 4/100 (4%)
Query 2 EDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNLS 61
E+VKW+SFH YDFGYLVKLLT LPE E+ FF+++ F P++YD+K+L++ N
Sbjct 149 ENVKWLSFHSGYDFGYLVKLLTDSRLPEEEHEFFQILNLFFPAIYDVKYLMKSCKNLK-- 206
Query 62 QGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLILWNL 101
LQ+V++QL +KRIG QHQAGSDSL+T F + L
Sbjct 207 --GGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFRMKEL 244
> dre:100334227 CCR4-NOT transcription complex, subunit 8-like
Length=247
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 68/95 (71%), Gaps = 4/95 (4%)
Query 2 EDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNLS 61
E+VKW+SFH YDFGYLVKLLT LPE E+ FF+++ F P++YD+K+L++ N
Sbjct 149 ENVKWLSFHSGYDFGYLVKLLTDSRLPEEEHEFFQILNLFFPAIYDVKYLMKSCKNLK-- 206
Query 62 QGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFL 96
LQ+V++QL +KRIG QHQAGSDSL+T F
Sbjct 207 --GGLQEVADQLELKRIGRQHQAGSDSLLTGMAFF 239
> ath:AT2G32070 CCR4-NOT transcription complex protein, putative
Length=275
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNL 60
NE+V W++FH YDFGYL+KLLTC++LPE++ FFE++ + P +YDIK L++ F
Sbjct 154 NENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYFPRVYDIKHLMK----FCN 209
Query 61 SQGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTF 95
S L K++E L+V+R+G HQAGSDSL+T CTF
Sbjct 210 SLHGGLNKLAELLDVERVGICHQAGSDSLLTSCTF 244
> cpv:cgd3_350 Pop2p-like 3'5' exonuclease, CCR4-NOT transcription
complex ; K12581 CCR4-NOT transcription complex subunit
7/8
Length=277
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/103 (61%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNL 60
N VKWISFHGCYDF YLVK+L+ + LPE+E F ELV+ P+LYD+KF+L+ L +L
Sbjct 152 NPKVKWISFHGCYDFAYLVKILSSQPLPETETNFIELVKALFPTLYDLKFILKQLS--SL 209
Query 61 SQGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLILWNLIL 103
S SSLQK+SE L ++RIG HQAGSD+LVTCCTF L+ L L
Sbjct 210 SHLSSLQKLSEHLKIQRIGIAHQAGSDALVTCCTFFKLFKLHL 252
> hsa:9337 CNOT8, CAF1, CALIF, POP2, hCAF1; CCR4-NOT transcription
complex, subunit 8; K12581 CCR4-NOT transcription complex
subunit 7/8
Length=292
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 70/100 (70%), Gaps = 4/100 (4%)
Query 2 EDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNLS 61
++VKW+SFH YDFGY+VKLLT LPE E+ FF ++ F PS+YD+K+L++ N
Sbjct 149 DNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLK-- 206
Query 62 QGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLILWNL 101
LQ+V++QL+++RIG QHQAGSDSL+T F + L
Sbjct 207 --GGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKEL 244
> mmu:69125 Cnot8, 1500015I04Rik, 1810022F04Rik, AA536816, AU015770,
AU043059; CCR4-NOT transcription complex, subunit 8;
K12581 CCR4-NOT transcription complex subunit 7/8
Length=292
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 70/100 (70%), Gaps = 4/100 (4%)
Query 2 EDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNLS 61
++VKW+SFH YDFGY+VKLLT LPE E+ FF ++ F PS+YD+K+L++ N
Sbjct 149 DNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLK-- 206
Query 62 QGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLILWNL 101
LQ+V++QL+++RIG QHQAGSDSL+T F + L
Sbjct 207 --GGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKEL 244
> xla:379811 cnot8, MGC52767; CCR4-NOT transcription complex,
subunit 8; K12581 CCR4-NOT transcription complex subunit 7/8
Length=289
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 70/100 (70%), Gaps = 4/100 (4%)
Query 2 EDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNLS 61
++VKW+SFH YDFGY+VKLLT LPE E+ FF ++ F PS+YD+K+L++ N
Sbjct 149 DNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLK-- 206
Query 62 QGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLILWNL 101
LQ+V++QL+++RIG QHQAGSDSL+T F + L
Sbjct 207 --GGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKEL 244
> dre:768119 cnot7, CAF1, fd59c07, fj07d05, wu:fd59c07, wu:fj07d05,
zgc:153168; CCR4-NOT transcription complex, subunit 7;
K12581 CCR4-NOT transcription complex subunit 7/8
Length=286
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query 2 EDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNLS 61
E VKW+SFH YDFGYL+K+L+ LP+ E FFE+++ F P +YD+K+L++ N
Sbjct 149 EGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEILRLFFPIIYDVKYLMKSCKNLK-- 206
Query 62 QGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLILWNLIL 103
LQ+V+EQL ++RIGPQHQAGSDSL+T F + +
Sbjct 207 --GGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFF 246
> ath:AT1G80780 CCR4-NOT transcription complex protein, putative;
K12581 CCR4-NOT transcription complex subunit 7/8
Length=274
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNL 60
NE+V W++FH YDFGYL+KLLTC++LP+S+ FF+L+ + P++YDIK L++ F
Sbjct 153 NENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYFPTVYDIKHLMK----FCN 208
Query 61 SQGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTF 95
S L K++E L V+R+G HQAGSDSL+T CTF
Sbjct 209 SLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTF 243
> ath:AT1G15920 CCR4-NOT transcription complex protein, putative
Length=286
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 66/96 (68%), Gaps = 4/96 (4%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNL 60
N+ + W++FH YDFGYL+KLL+ + LPE + FF+ ++ F P +YDIK+L+ F
Sbjct 163 NDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFFPVVYDIKYLM----GFCT 218
Query 61 SQGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFL 96
+ L+K++E L VKR+G HQAGSDSL+T TF+
Sbjct 219 NLYGGLEKIAELLGVKRVGISHQAGSDSLLTLRTFI 254
> ath:AT5G10960 CCR4-NOT transcription complex protein, putative;
K12581 CCR4-NOT transcription complex subunit 7/8
Length=277
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 4/95 (4%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNL 60
N+ + W++FHG YDFGYLVKLLTC+ LP + FF+L+ + P++YDIK L+ F
Sbjct 153 NDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYFPTVYDIKHLM----TFCN 208
Query 61 SQGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTF 95
L +++E + V+R+G HQAGSDSL+T +F
Sbjct 209 GLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSF 243
> cel:Y56A3A.20 ccf-1; yeast CCR4 Associated Factor family member
(ccf-1); K12581 CCR4-NOT transcription complex subunit 7/8
Length=310
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 0/93 (0%)
Query 4 VKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNLSQG 63
+ W++F YDFGYL+K +T LP+ E+ FF + P+ +DIK LLR +
Sbjct 162 ITWLTFSSGYDFGYLLKSITLGDLPKEESTFFMCHKTLFPTSFDIKILLRTPNCASAKLK 221
Query 64 SSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFL 96
LQ+V++QL+VKR G +HQAGSD+L+T TF
Sbjct 222 GGLQEVADQLDVKRQGVRHQAGSDALLTAATFF 254
> ath:AT5G22250 CCR4-NOT transcription complex protein, putative
Length=278
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 5/107 (4%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQD-FCPSLYDIKFLLRDLPNFN 59
NE V W++FH YDFGYLVK+LT LP + F L++ F +YD+K ++R
Sbjct 159 NESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIMR-FCEQR 217
Query 60 LSQGSSLQKVSEQLNVKR-IGPQHQAGSDSLVTCCTFLILWNLILME 105
L G L +V+ L V R +G HQAGSDSL+T F + +L +E
Sbjct 218 LYGG--LDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYFVE 262
> ath:AT3G44260 CCR4-NOT transcription complex protein, putative
Length=280
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQD-FCPSLYDIKFLLRDLPNFN 59
NE+V W++FH YDFGYL+K+LT LP + F +++ F +YD+K +++
Sbjct 161 NEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMMK-FCERR 219
Query 60 LSQGSSLQKVSEQLNVKR-IGPQHQAGSDSLVTCCTFLILWNLILME 105
L G L +V+ L V R +G HQAGSDSL+T F + +L ++
Sbjct 220 LFGG--LDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQ 264
> ath:AT1G61470 CCR4-NOT transcription complex protein, putative
Length=278
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query 4 VKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPS-LYDIKFLLRDLPNFNLSQ 62
++W++F G YD YL+K LT + LPE+ F E VQ +YD+K + LS
Sbjct 135 MRWVTFQGSYDKAYLLKGLTRKPLPETSKEFDETVQQLLGRFVYDVKKMAGLCS--GLSS 192
Query 63 GSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLIL 98
LQ++++ L ++R+G H AGSDS +T F L
Sbjct 193 RFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKL 228
> ath:AT3G44240 CCR4-NOT transcription complex protein, putative
Length=239
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFNL 60
++ W++FHG YD YL+K T E+LP + F + V S+YD+K + L
Sbjct 120 RRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCE--GL 177
Query 61 SQGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTF 95
S L+ ++ + + R+G H AGS++ +T F
Sbjct 178 SSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVF 212
> ath:AT1G27820 CCR4-NOT transcription complex protein, putative
Length=310
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query 4 VKWISFHGCYDFGYLVKLLTC-ESLPESENAFFELVQDFCPS-LYDIKFLLRDLPNFNLS 61
+ W++F G YD YLVK LT + LPE++ F E VQ ++D+K + LS
Sbjct 140 ITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVKKIAESCSG--LS 197
Query 62 QGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLIL 98
LQ++++ L +KR+G H AGSDS +T F L
Sbjct 198 SQFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKL 234
> ath:AT1G27890 CCR4-NOT transcription complex protein, putative
Length=302
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query 4 VKWISFHGCYDFGYLVKLLTC-ESLPESENAFFELVQDFCPS-LYDIKFLLRDLPNFNLS 61
+ W++F G YD YLVK LT + LPE++ F E V+ ++D+K + LS
Sbjct 135 ITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVKKIAESCSG--LS 192
Query 62 QGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLIL 98
LQ++++ L +KR+G H AGSDS +T F L
Sbjct 193 SRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKL 229
> ath:AT1G06450 CCR4-NOT transcription complex protein, putative
Length=360
Score = 58.5 bits (140), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query 4 VKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNF--NLS 61
V++++F G YDF Y + +L LPE+ F V +YD K + F L
Sbjct 145 VEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFGQVYDTKV----MAGFCEGLG 200
Query 62 QGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTFLIL 98
+ L K+++ L + R+G H AGSDSL+T F+ L
Sbjct 201 EHLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKL 237
> sce:YNR052C POP2, CAF1; Pop2p (EC:3.1.13.4); K12581 CCR4-NOT
transcription complex subunit 7/8
Length=433
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query 1 NEDVKWISFHGCYDFGYLVKLLTCESLPESENAFFELVQDFCPSLYDIKFLLRDLPNFN- 59
++ V WI++H YD G+L+ +L +S+P ++ F V + P+ YD+ + + + F
Sbjct 297 DDSVTWITYHAAYDLGFLINILMNDSMPNNKEDFEWWVHQYMPNFYDLNLVYKIIQEFKN 356
Query 60 ----------LSQGSSLQKVSEQLNVKRIGPQHQAGSDSLVTCCTF 95
Q SL ++++L + R G SL+ +F
Sbjct 357 PQLQQSSQQQQQQQYSLTTLADELGLPRFSIFTTTGGQSLLMLLSF 402
> mmu:11787 Apbb2, 2310007D03Rik, FE65L1, Rirl1, TR2L, Zfra; amyloid
beta (A4) precursor protein-binding, family B, member
2; K04530 amyloid beta (A4) precursor protein-binding, family
B, member 2 (Fe65-like)
Length=758
Score = 28.9 bits (63), Expect = 4.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 0/34 (0%)
Query 56 PNFNLSQGSSLQKVSEQLNVKRIGPQHQAGSDSL 89
PN NLS + + SE+L VK PQ +G + L
Sbjct 118 PNKNLSPAAVINLTSEKLEVKDPHPQESSGCEIL 151
> bbo:BBOV_II007020 18.m06581; CAF1 family ribonuclease containing
protein; K01148 poly(A)-specific ribonuclease [EC:3.1.13.4]
Length=551
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 0/36 (0%)
Query 74 NVKRIGPQHQAGSDSLVTCCTFLILWNLILMERSMK 109
N + H AG DS +TC F++ + IL + +K
Sbjct 385 NTGKTTQSHDAGYDSFMTCLVFILQCDRILRSKHLK 420
> tgo:TGME49_115580 hypothetical protein
Length=1292
Score = 27.7 bits (60), Expect = 9.1, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 11/52 (21%)
Query 23 TCESLPESENAFFELVQDFCPSLYD-----------IKFLLRDLPNFNLSQG 63
TCES +S A F P LYD + FL+ D+P + S G
Sbjct 677 TCESAGDSSKATGRSFSPFGPFLYDMDGVSEDKKYRLSFLMVDIPGYGNSSG 728
Lambda K H
0.324 0.139 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2072286120
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40