bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_2694_orf3
Length=134
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_120640 cyclophilin, putative (EC:5.2.1.8); K12736 p... 103 1e-22
tpv:TP01_0815 cyclophilin; K12736 peptidylprolyl isomerase dom... 68.2 6e-12
ath:AT3G44600 CYP71; CYP71 (CYCLOPHILIN71); chromatin binding ... 64.7 7e-11
pfa:PFE0505w cyclophilin, putative (EC:5.2.1.8); K12736 peptid... 64.3 9e-11
bbo:BBOV_IV009550 23.m05787; peptidyl-prolyl cis-trans isomera... 62.4 4e-10
cpv:cgd7_520 cyclin'cyclophilin like peptidyl-prolyl cis-trans... 58.2 8e-09
xla:100036992 ppwd1; peptidylprolyl isomerase domain and WD re... 50.4 1e-06
mmu:238831 Ppwd1, 4632422M10Rik, A330090G21Rik; peptidylprolyl... 48.5 5e-06
hsa:23398 PPWD1, KIAA0073; peptidylprolyl isomerase domain and... 47.8 1e-05
dre:100000660 ppwd1, zgc:165355; peptidylprolyl isomerase doma... 45.8 3e-05
cel:Y87G2A.6 cyn-15; CYclophyliN family member (cyn-15); K1273... 42.4 4e-04
tgo:TGME49_086760 hypothetical protein 33.1 0.25
ath:AT5G24320 WD-40 repeat family protein 32.3 0.41
mmu:74255 Smu1, 2600001O03Rik, 2610203K23Rik, AB044414, AI8450... 32.0 0.57
hsa:55234 SMU1, BWD, DKFZp761L0916, FLJ10805, FLJ10870, FLJ119... 32.0 0.57
xla:447447 wdr5-b, MGC81485, big-3, swd3, wdr5, xwdr5; WD repe... 32.0 0.60
xla:446809 wdr5-a, MGC80538, big-3, swd3, xwdr5; WD repeat dom... 32.0 0.60
tgo:TGME49_000280 WD-repeat protein, putative (EC:2.7.11.1) 31.6 0.65
mmu:140858 Wdr5, 2410008O07Rik, AA408785, AA960360, Big, Big-3... 31.6 0.72
hsa:11091 WDR5, BIG-3, SWD3; WD repeat domain 5; K14963 COMPAS... 31.6 0.72
ath:AT4G32500 AKT5; AKT5; cyclic nucleotide binding / inward r... 31.2 0.94
dre:494534 cdc40, zgc:86860; cell division cycle 40 homolog (S... 30.8 1.1
xla:447521 cdc40, MGC83346; cell division cycle 40 homolog; K1... 30.8 1.1
mmu:71713 Cdc40, 1200003H23Rik, EHB3, PRP17; cell division cyc... 30.8 1.1
hsa:51362 CDC40, EHB3, FLJ10564, MGC102802, PRP17, PRPF17; cel... 30.8 1.1
xla:431914 smu1, MGC81475; smu-1 suppressor of mec-8 and unc-5... 30.4 1.5
cel:R06A4.9 hypothetical protein 30.4 1.7
hsa:84916 CIRH1A, CIRHIN, FLJ14728, FLJ17146, KIAA1988, NAIC, ... 29.6 3.0
dre:100151413 cbfa2t2; core-binding factor, runt domain, alpha... 29.3 3.5
dre:393168 smu1, MGC56147, zgc:56147; smu-1 suppressor of mec-... 29.3 3.7
ath:AT5G53780 hypothetical protein 28.9 4.9
cel:Y45F10D.7 hypothetical protein; K14554 U3 small nucleolar ... 28.5 5.6
dre:570074 WD40 repeat-containing protein SMU1-like; K13111 WD... 28.5 5.8
> tgo:TGME49_120640 cyclophilin, putative (EC:5.2.1.8); K12736
peptidylprolyl isomerase domain and WD repeat-containing protein
1 [EC:5.2.1.8]
Length=764
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 0/107 (0%)
Query 28 ESNPGHLDGNENGTTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYYEM 87
+S H + + T ALA+A +P+GQ LAVL AD LRIF K+++VYLET+ YE
Sbjct 376 KSETDHFELAKVKTYALALAVAPDGQLLAVLSADSTLRIFRFTTGKIAKVYLETVDMYET 435
Query 88 AQKDPQCALLHQDALDFEQRAALEKELSRSPLRLHQNLLFDSSSSFL 134
AQ DPQ LH DALDFE R A EKELS++ R Q + FD SS+FL
Sbjct 436 AQNDPQRRALHVDALDFEHRLAAEKELSKARGRAWQTMSFDESSNFL 482
> tpv:TP01_0815 cyclophilin; K12736 peptidylprolyl isomerase domain
and WD repeat-containing protein 1 [EC:5.2.1.8]
Length=539
Score = 68.2 bits (165), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query 41 TTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYYEMAQKDPQCALLHQD 100
T +++ SPN +A+ D +RIF KL RVY ET+ Y +AQ DP ++LH D
Sbjct 198 THVVSMCLSPNFNLVAMYCHDGMIRIFRFATMKLFRVYDETVTMYSVAQTDPNQSILHFD 257
Query 101 ALDFEQRAALEKELSRSPLR--LHQNLLFDSSSSFL 134
DF +R ++E E++++ + NLLFDSSS++L
Sbjct 258 PADFLRRQSIENEINKAGKDEGEYMNLLFDSSSNYL 293
> ath:AT3G44600 CYP71; CYP71 (CYCLOPHILIN71); chromatin binding
/ histone binding / peptidyl-prolyl cis-trans isomerase; K12736
peptidylprolyl isomerase domain and WD repeat-containing
protein 1 [EC:5.2.1.8]
Length=631
Score = 64.7 bits (156), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query 41 TTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYYEMAQKDPQCALLHQD 100
TT AI SP+G+ ++ D +R+F R KL RVY E+L + Q+ L +
Sbjct 260 TTISAIEVSPDGKQFSITAPDRRIRVFWFRTGKLRRVYDESLVVAQDLQRS-DAPLYRLE 318
Query 101 ALDFEQRAALEKELSRSPLRLHQNLLFDSSSSFL 134
A+DF +R A+EKEL ++ N +FD SS+FL
Sbjct 319 AIDFGRRMAVEKELEKTESAPQPNAVFDESSNFL 352
> pfa:PFE0505w cyclophilin, putative (EC:5.2.1.8); K12736 peptidylprolyl
isomerase domain and WD repeat-containing protein
1 [EC:5.2.1.8]
Length=747
Score = 64.3 bits (155), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query 41 TTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYYEMAQKDPQCALLHQD 100
T AL I+ S +G+++A+L ++ LRI+ KL RVY E+ + Y AQ DP LH D
Sbjct 373 TYALCISLSLDGEYMAILSENYFLRIYKFESMKLYRVYDESTEMYLTAQNDPLKKELHID 432
Query 101 ALDFEQRAALEKELSRSPLRLHQN---LLFDSSSSFL 134
+ DF +R +EKE+ + + N + FD S+ ++
Sbjct 433 SFDFGKRLFIEKEIKKYMKNQNINFNMISFDESNQYI 469
> bbo:BBOV_IV009550 23.m05787; peptidyl-prolyl cis-trans isomerase;
K12736 peptidylprolyl isomerase domain and WD repeat-containing
protein 1 [EC:5.2.1.8]
Length=589
Score = 62.4 bits (150), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query 41 TTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYYEMAQKDPQCALLHQD 100
T +++A SPNG++ A+ D +R++ KL RVY E+ Y AQ DP + LH +
Sbjct 224 THVVSMAISPNGEFTAMHCHDGMIRLYRFVTMKLIRVYDESALMYSAAQSDPNASSLHLE 283
Query 101 ALDFEQRAALEKELSR--SPLRLHQNLLFDSSSSFL 134
++DF +R A E EL++ + + + FDSSS++L
Sbjct 284 SVDFLKRRAQEIELAKLGTEQGEYSGMTFDSSSNYL 319
> cpv:cgd7_520 cyclin'cyclophilin like peptidyl-prolyl cis-trans
isomerase fused to WD40 repeats at the N-terminus' ; K12736
peptidylprolyl isomerase domain and WD repeat-containing
protein 1 [EC:5.2.1.8]
Length=778
Score = 58.2 bits (139), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query 38 ENGTTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYYEMAQKDPQCALL 97
+N A+ + S + + LA+ +D+ +R+F ++ K +++ E + Y + Q +P+ L
Sbjct 403 KNKCYAINMVVSNDERNLAIKCSDYKIRLFLIQTGKCYKIFDENISSYNVMQSNPEYDYL 462
Query 98 HQDALDFEQRAALEKELSRSPLRLH-QNLLFDSSSSFL 134
H D L+F R+++E E+ P + QN++FD +S FL
Sbjct 463 HIDHLEFGVRSSVETEIQNLPEYYNMQNMVFDETSRFL 500
> xla:100036992 ppwd1; peptidylprolyl isomerase domain and WD
repeat containing 1 (EC:5.2.1.8); K12736 peptidylprolyl isomerase
domain and WD repeat-containing protein 1 [EC:5.2.1.8]
Length=642
Score = 50.4 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
Query 45 AIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYY----EMAQKDPQCALLHQD 100
+I+ SP+G+ +A +G+D +RIF KL RV+ E+L + +M Q+ P
Sbjct 281 SISFSPDGKKMATVGSDRKVRIFRFLTGKLMRVFDESLSMFTELQQMRQQLPD------- 333
Query 101 ALDFEQRAALEKELSRSPLRLHQNLLFDSSSSFL 134
++F +R A+E+EL + N++FD + F+
Sbjct 334 -MEFGRRMAVERELEKVDAMKLMNIIFDETGHFV 366
> mmu:238831 Ppwd1, 4632422M10Rik, A330090G21Rik; peptidylprolyl
isomerase domain and WD repeat containing 1 (EC:5.2.1.8);
K12736 peptidylprolyl isomerase domain and WD repeat-containing
protein 1 [EC:5.2.1.8]
Length=646
Score = 48.5 bits (114), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query 45 AIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYY----EMAQKDPQCALLHQD 100
+I SP+G+ +A +G+D +RIF KL RV+ E+L + +M Q+ P
Sbjct 285 SICFSPDGKKIATIGSDRKVRIFRFLTGKLMRVFDESLSMFTELQQMRQQLPD------- 337
Query 101 ALDFEQRAALEKELSRSPLRLHQNLLFDSSSSFL 134
++F +R A+E+EL + N++FD + F+
Sbjct 338 -MEFGRRMAVERELEKVDAVRLVNIVFDETGHFV 370
> hsa:23398 PPWD1, KIAA0073; peptidylprolyl isomerase domain and
WD repeat containing 1 (EC:5.2.1.8); K12736 peptidylprolyl
isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8]
Length=646
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query 45 AIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYY----EMAQKDPQCALLHQD 100
++ SP+G+ +A +G+D +RIF KL RV+ E+L + +M Q+ P
Sbjct 285 SVCFSPDGKKIATIGSDRKVRIFRFVTGKLMRVFDESLSMFTELQQMRQQLPD------- 337
Query 101 ALDFEQRAALEKELSRSPLRLHQNLLFDSSSSFL 134
++F +R A+E+EL + N++FD + F+
Sbjct 338 -MEFGRRMAVERELEKVDAVRLINIVFDETGHFV 370
> dre:100000660 ppwd1, zgc:165355; peptidylprolyl isomerase domain
and WD repeat containing 1 (EC:5.2.1.8); K12736 peptidylprolyl
isomerase domain and WD repeat-containing protein 1
[EC:5.2.1.8]
Length=622
Score = 45.8 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 14/100 (14%)
Query 40 GTTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYY----EMAQKDPQCA 95
GT ++A S +G+ +A + D +RIF KL RV+ E+L + +M Q+ P
Sbjct 256 GTYPTSLAFSQDGKKMATIAVDRKVRIFRFLTGKLMRVFDESLTMFTELQQMRQQLPD-- 313
Query 96 LLHQDALDFEQRAALEKELSR-SPLRLHQNLLFDSSSSFL 134
++F +R A+E+EL + +RL N++FD + F+
Sbjct 314 ------MEFGRRMAVERELEKVDGIRL-TNIIFDETGHFV 346
> cel:Y87G2A.6 cyn-15; CYclophyliN family member (cyn-15); K12736
peptidylprolyl isomerase domain and WD repeat-containing
protein 1 [EC:5.2.1.8]
Length=629
Score = 42.4 bits (98), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query 50 PNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYYEM-AQKDPQCALLHQDALDFEQRA 108
P+G LA D +RIF V+ KL+++ ET Q Y A+++ L H +++ +R
Sbjct 257 PSGLKLATFAEDRKIRIFNVKTGKLAQLIDETTQKYHCEAKENKNYGLQH---MEWSRRL 313
Query 109 ALEKEL---SRSPLRLHQNLLFDSSSSFL 134
A EKE+ ++ L+ + + FD S +FL
Sbjct 314 ASEKEMDKDKKNSLK-YTKICFDQSGNFL 341
> tgo:TGME49_086760 hypothetical protein
Length=446
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 21/96 (21%)
Query 44 LAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQ---------------YYEMA 88
LA A S W+ + A ++ VR ++LS Y L Y +
Sbjct 173 LASAESHMKGWVLSVAAA----VWEVRGSRLSEAYERELMNLYDRPACGTTGVRAYLNVG 228
Query 89 QKDPQCALLHQDALDFEQRAALEKELSRSPL-RLHQ 123
++D CA LHQ+ L EQRA E EL R L ++HQ
Sbjct 229 ERDA-CAALHQEVLRLEQRANAEAELQREYLTQVHQ 263
> ath:AT5G24320 WD-40 repeat family protein
Length=698
Score = 32.3 bits (72), Expect = 0.41, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query 44 LAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYYEMAQKDPQCALLHQDALD 103
LA+ SP+G++LA G D LR++ V V E + +++ + DP C L
Sbjct 255 LAMKFSPDGRYLASAGEDGVLRVWSV-------VEDERCEEHDVPKIDPSCIYFEVSKLS 307
Query 104 FEQRAALEKE 113
+ A+EK+
Sbjct 308 ELRPVAVEKD 317
> mmu:74255 Smu1, 2600001O03Rik, 2610203K23Rik, AB044414, AI845086,
AW556129, Bwd; smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans); K13111 WD40 repeat-containing protein SMU1
Length=513
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 0/42 (0%)
Query 36 GNENGTTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRV 77
G G + A SP G+W+ +G DF L F KL R
Sbjct 438 GKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERT 479
> hsa:55234 SMU1, BWD, DKFZp761L0916, FLJ10805, FLJ10870, FLJ11970,
MGC117363, RP11-54K16.3, SMU-1, fSAP57; smu-1 suppressor
of mec-8 and unc-52 homolog (C. elegans); K13111 WD40 repeat-containing
protein SMU1
Length=513
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 0/42 (0%)
Query 36 GNENGTTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRV 77
G G + A SP G+W+ +G DF L F KL R
Sbjct 438 GKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERT 479
> xla:447447 wdr5-b, MGC81485, big-3, swd3, wdr5, xwdr5; WD repeat
domain 5; K14963 COMPASS component SWD3
Length=334
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 0/33 (0%)
Query 45 AIAASPNGQWLAVLGADFHLRIFGVRRAKLSRV 77
++ SPNG+WLA AD ++I+G K +
Sbjct 50 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 82
> xla:446809 wdr5-a, MGC80538, big-3, swd3, xwdr5; WD repeat domain
5; K14963 COMPASS component SWD3
Length=334
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 0/33 (0%)
Query 45 AIAASPNGQWLAVLGADFHLRIFGVRRAKLSRV 77
++ SPNG+WLA AD ++I+G K +
Sbjct 50 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 82
> tgo:TGME49_000280 WD-repeat protein, putative (EC:2.7.11.1)
Length=834
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query 48 ASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYYEMAQK----DPQCALLHQDALD 103
ASP+G+WLA + L + VR K RV +LQ +E A DP LL D
Sbjct 624 ASPDGEWLATSHQNGSLSVLNVRAEKCERVA--SLQLHEEAATGVAFDPSGRLLATQGKD 681
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 0/50 (0%)
Query 43 ALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYLETLQYYEMAQKDP 92
A +A P+G+ LA G D L++ +R K L Y + Q P
Sbjct 663 ATGVAFDPSGRLLATQGKDKQLKVVDIRMWKEVMTLLHIEMRYNIVQASP 712
> mmu:140858 Wdr5, 2410008O07Rik, AA408785, AA960360, Big, Big-3;
WD repeat domain 5; K14963 COMPASS component SWD3
Length=334
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 0/33 (0%)
Query 45 AIAASPNGQWLAVLGADFHLRIFGVRRAKLSRV 77
++ SPNG+WLA AD ++I+G K +
Sbjct 50 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 82
> hsa:11091 WDR5, BIG-3, SWD3; WD repeat domain 5; K14963 COMPASS
component SWD3
Length=334
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 0/33 (0%)
Query 45 AIAASPNGQWLAVLGADFHLRIFGVRRAKLSRV 77
++ SPNG+WLA AD ++I+G K +
Sbjct 50 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 82
> ath:AT4G32500 AKT5; AKT5; cyclic nucleotide binding / inward
rectifier potassium channel
Length=880
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
Query 27 RESNPGHLDGNENGTTALAIAASPNGQWLAVL----GADFHLR 65
R SNP D +NG TAL IAAS Q+ VL GAD ++R
Sbjct 564 RGSNPNETD--KNGRTALHIAASKGSQYCVVLLLEHGADPNIR 604
> dre:494534 cdc40, zgc:86860; cell division cycle 40 homolog
(S. cerevisiae); K12816 pre-mRNA-processing factor 17
Length=578
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query 45 AIAASPNGQWLAVLGADFHLRIFGVR-RAKLSR 76
A+ SPNG+WLA D + IFG + R +L++
Sbjct 465 AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK 497
> xla:447521 cdc40, MGC83346; cell division cycle 40 homolog;
K12816 pre-mRNA-processing factor 17
Length=567
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query 45 AIAASPNGQWLAVLGADFHLRIFGVR-RAKLSR 76
A+ SPNG+WLA D + IFG + R +L++
Sbjct 454 AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK 486
> mmu:71713 Cdc40, 1200003H23Rik, EHB3, PRP17; cell division cycle
40 homolog (yeast); K12816 pre-mRNA-processing factor 17
Length=579
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query 45 AIAASPNGQWLAVLGADFHLRIFGVR-RAKLSR 76
A+ SPNG+WLA D + IFG + R +L++
Sbjct 466 AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK 498
> hsa:51362 CDC40, EHB3, FLJ10564, MGC102802, PRP17, PRPF17; cell
division cycle 40 homolog (S. cerevisiae); K12816 pre-mRNA-processing
factor 17
Length=579
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query 45 AIAASPNGQWLAVLGADFHLRIFGVR-RAKLSR 76
A+ SPNG+WLA D + IFG + R +L++
Sbjct 466 AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK 498
> xla:431914 smu1, MGC81475; smu-1 suppressor of mec-8 and unc-52
homolog; K13111 WD40 repeat-containing protein SMU1
Length=513
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 0/41 (0%)
Query 36 GNENGTTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSR 76
G G + SP G+W+ +G DF L F KL R
Sbjct 438 GKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLER 478
> cel:R06A4.9 hypothetical protein
Length=809
Score = 30.4 bits (67), Expect = 1.7, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 0/41 (0%)
Query 38 ENGTTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVY 78
E+ ++ +A+ + NG WL G D ++++ +R K R Y
Sbjct 301 EHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTY 341
> hsa:84916 CIRH1A, CIRHIN, FLJ14728, FLJ17146, KIAA1988, NAIC,
TEX292; cirrhosis, autosomal recessive 1A (cirhin); K14548
U3 small nucleolar RNA-associated protein 4
Length=686
Score = 29.6 bits (65), Expect = 3.0, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 0/29 (0%)
Query 46 IAASPNGQWLAVLGADFHLRIFGVRRAKL 74
+A SP+G WLA G + ++ V++ KL
Sbjct 490 LAVSPDGNWLAASGTSAGVHVYNVKQLKL 518
> dre:100151413 cbfa2t2; core-binding factor, runt domain, alpha
subunit 2; translocated to, 2
Length=248
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query 9 NFMRICNETEGAERGCVCRESNPGHLDGNENGTTALAIAASPNGQWLAVLGADFHLRIFG 68
+ +R C E++ E R SNP H +G +NG T + I S L+ G + +
Sbjct 45 SVLRRCQESDREELNFWRRRSNP-HDEGRKNGNTPVNIPFSKTHSPLSAEGVNAEEAVNE 103
Query 69 VRRAKLSRV 77
V+R + V
Sbjct 104 VKRQAMDEV 112
> dre:393168 smu1, MGC56147, zgc:56147; smu-1 suppressor of mec-8
and unc-52 homolog (C. elegans); K13111 WD40 repeat-containing
protein SMU1
Length=513
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 0/42 (0%)
Query 36 GNENGTTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRV 77
G G + SP G+W+ +G D+ L F KL R
Sbjct 438 GKREGGDFVCCTLSPRGEWIYCVGEDYVLYCFSTVTGKLERT 479
> ath:AT5G53780 hypothetical protein
Length=376
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query 35 DGNENGTTALAIAASPNGQ--WLAVLGADF 62
DGNE TTA I SP Q +L ++GA F
Sbjct 187 DGNEIHTTASDIVYSPRNQMLFLVIMGASF 216
> cel:Y45F10D.7 hypothetical protein; K14554 U3 small nucleolar
RNA-associated protein 21
Length=893
Score = 28.5 bits (62), Expect = 5.6, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 0/40 (0%)
Query 40 GTTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSRVYL 79
G A+ S +G+WL V D ++R+F V ++L V L
Sbjct 556 GNKVNAMTFSSDGKWLLVADNDSYIRVFDVATSQLIDVLL 595
> dre:570074 WD40 repeat-containing protein SMU1-like; K13111
WD40 repeat-containing protein SMU1
Length=513
Score = 28.5 bits (62), Expect = 5.8, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 0/41 (0%)
Query 36 GNENGTTALAIAASPNGQWLAVLGADFHLRIFGVRRAKLSR 76
G G + SP G+W+ +G D+ L F KL R
Sbjct 438 GVREGADFVCCTLSPRGEWIYCVGEDYVLYCFSTITGKLER 478
Lambda K H
0.322 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2231140792
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40