bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_3028_orf2
Length=53
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_063300 porin, putative ; K15040 voltage-dependent a... 60.5 1e-09
> tgo:TGME49_063300 porin, putative ; K15040 voltage-dependent
anion channel protein 2
Length=290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%), Gaps = 0/34 (0%)
Query 20 MVLFKDIGKPASDLLKKGFPHEKSWELEYKYKSK 53
MVLFKD+ K +DLL KG+PHEK+W+LEYKYKSK
Sbjct 1 MVLFKDLNKSCADLLTKGYPHEKAWDLEYKYKSK 34
Lambda K H
0.318 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2018379896
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40