bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_3036_orf1
Length=141
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_067080 26S proteasome subunit 4, putative ; K03062 ... 229 3e-60
tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S ... 200 1e-51
ath:AT2G20140 26S protease regulatory complex subunit 4, putat... 197 1e-50
ath:AT4G29040 RPT2a; RPT2a (regulatory particle AAA-ATPase 2a)... 196 1e-50
pfa:PF10_0081 26S proteasome regulatory subunit 4, putative; K... 192 4e-49
bbo:BBOV_IV009290 23.m06008; 26S protease regulatory subunit 4... 190 9e-49
dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,... 189 3e-48
mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macro... 189 3e-48
hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome ... 189 3e-48
xla:380240 psmc1, MGC64535, pros26.4; proteasome (prosome, mac... 189 3e-48
dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome (p... 187 1e-47
cpv:cgd4_1170 26S proteasome regulatory subunit S4 like AAA AT... 182 4e-46
cel:F29G9.5 rpt-2; proteasome Regulatory Particle, ATPase-like... 171 5e-43
sce:YDL007W RPT2, YHS4, YTA5; One of six ATPases of the 19S re... 161 5e-40
cel:F23F12.6 rpt-3; proteasome Regulatory Particle, ATPase-lik... 94.4 1e-19
tpv:TP04_0031 26S proteasome aaa-ATPase subunit Rpt3 (EC:3.6.4... 90.1 2e-18
tgo:TGME49_029950 26S protease regulatory subunit 6b, putative... 89.4 3e-18
bbo:BBOV_II004930 18.m06410; 26s proteasome aaa-ATPase subunit... 89.4 4e-18
cpv:cgd4_2540 26S proteasome regulatory subunit 26b like AAA A... 89.4 4e-18
sce:YDR394W RPT3, YNT1, YTA2; One of six ATPases of the 19S re... 89.0 4e-18
xla:398853 psmc4, MGC68784; proteasome (prosome, macropain) 26... 87.8 1e-17
pfa:PFD0665c 26S proteasome AAA-ATPase subunit RPT3, putative ... 87.4 1e-17
hsa:652826 26S protease regulatory subunit 6B-like; K03063 26S... 86.7 2e-17
hsa:5704 PSMC4, MGC13687, MGC23214, MGC8570, MIP224, S6, TBP7;... 86.3 2e-17
mmu:23996 Psmc4, CIP21, MGC103150, MIP224; proteasome (prosome... 86.3 3e-17
ath:AT5G58290 RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE ... 86.3 3e-17
dre:326884 psmc4, wu:fe38b10, zgc:63709; proteasome (prosome, ... 85.5 4e-17
cel:C10G11.8 ATPase; hypothetical protein; K03062 26S proteaso... 83.6 2e-16
xla:443908 psmc5, MGC53028, MGC80185, sug-1, sug1, tbp10; prot... 63.5 2e-10
mmu:19184 Psmc5, mSUG1; protease (prosome, macropain) 26S subu... 63.5 2e-10
hsa:5705 PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG; p... 63.5 2e-10
dre:445285 psmc5, wu:fa14g03, wu:fb23a11, zgc:92464; proteasom... 63.5 2e-10
xla:397968 psmc5, xsug1; XSUG1 protein; K03066 26S proteasome ... 63.5 2e-10
tpv:TP02_0893 26S proteasome regulatory subunit; K03066 26S pr... 62.8 4e-10
cel:F56F11.4 hypothetical protein; K03066 26S proteasome regul... 60.5 2e-09
pfa:PFL2345c tat-binding protein homolog; K03066 26S proteasom... 59.7 3e-09
cel:Y49E10.1 rpt-6; proteasome Regulatory Particle, ATPase-lik... 59.3 3e-09
tpv:TP04_0152 26S proteasome regulatory subunit; K03064 26S pr... 58.5 6e-09
ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03... 57.8 1e-08
cpv:cgd8_840 26S proteasome regulatory subunit S10b like AAA+ ... 57.8 1e-08
mmu:19182 Psmc3, TBP-1; proteasome (prosome, macropain) 26S su... 57.0 2e-08
hsa:5702 PSMC3, MGC8487, TBP1; proteasome (prosome, macropain)... 57.0 2e-08
xla:379370 psmc3, MGC53343, psmc3-b, tbp10; proteasome (prosom... 56.6 2e-08
ath:AT5G19990 RPT6A; RPT6A (REGULATORY PARTICLE TRIPLE-A ATPAS... 56.6 2e-08
xla:379941 nthl1, MGC64280, psmc3, psmc3-a; nth endonuclease I... 56.6 2e-08
dre:321947 psmc3, wu:fb39a02, zgc:86713; proteasome (prosome, ... 56.6 3e-08
bbo:BBOV_I000480 16.m00708; tat-binding protein-like protein; ... 56.6 3e-08
ath:AT5G43010 RPT4A; RPT4A; ATPase; K03064 26S proteasome regu... 56.2 3e-08
dre:100330292 26S protease regulatory subunit S10B-like 55.8 4e-08
dre:321585 psmc6, MGC101799, fb20g04, wu:fb20g04, wu:fc85c10; ... 55.8 4e-08
> tgo:TGME49_067080 26S proteasome subunit 4, putative ; K03062
26S proteasome regulatory subunit T2
Length=441
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/126 (90%), Positives = 121/126 (96%), Gaps = 0/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+EEEYI NQEQ KPAEE+NEE+V+RVDELRGSPLSVG LE +ID+QHAIVSSSIGPEYY
Sbjct 74 LLEEEYILNQEQRKPAEEKNEEDVNRVDELRGSPLSVGNLEEIIDEQHAIVSSSIGPEYY 133
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
VNILSFVDKDLLEPGCSVLLHNKTSSIVGIL+DEVDPLISVMKVEKAPLETY DIGGLEK
Sbjct 134 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILNDEVDPLISVMKVEKAPLETYADIGGLEK 193
Query 136 QIQEVK 141
QIQEVK
Sbjct 194 QIQEVK 199
> tpv:TP01_0845 26S proteasome regulatory subunit 4; K03062 26S
proteasome regulatory subunit T2
Length=415
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/126 (73%), Positives = 117/126 (92%), Gaps = 0/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+EEEYI+N+ HKP + +N++++ ++D++RGSP+SVGTLE +ID+ HAIV+SSIGPEYY
Sbjct 48 LLEEEYITNKSLHKPLKTKNQDDLIKLDDIRGSPMSVGTLEEIIDENHAIVTSSIGPEYY 107
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
VNILSFVDK+LLEPGCSVLLHNKT+SIVGIL D+VDPL+SVMKVEKAPLE+Y DIGGLE+
Sbjct 108 VNILSFVDKELLEPGCSVLLHNKTNSIVGILLDDVDPLVSVMKVEKAPLESYDDIGGLEE 167
Query 136 QIQEVK 141
QIQE+K
Sbjct 168 QIQEIK 173
> ath:AT2G20140 26S protease regulatory complex subunit 4, putative;
K03062 26S proteasome regulatory subunit T2
Length=443
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 112/126 (88%), Gaps = 0/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+EEE+++NQE+ KP EE+ EE+ S+VD+LRG+P+SVG LE LID+ HAIVSSS+GPEYY
Sbjct 76 LMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYY 135
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V ILSFVDKD LEPGCS+L+HNK S+VGIL DEVDP++SVMKVEKAPLE+Y DIGGLE
Sbjct 136 VGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEA 195
Query 136 QIQEVK 141
QIQE+K
Sbjct 196 QIQEIK 201
> ath:AT4G29040 RPT2a; RPT2a (regulatory particle AAA-ATPase 2a);
ATPase; K03062 26S proteasome regulatory subunit T2
Length=443
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 112/126 (88%), Gaps = 0/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+EEE+++NQE+ KP EE+ EE+ S+VD+LRG+P+SVG LE LID+ HAIVSSS+GPEYY
Sbjct 76 LMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYY 135
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V ILSFVDKD LEPGCS+L+HNK S+VGIL DEVDP++SVMKVEKAPLE+Y DIGGLE
Sbjct 136 VGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEA 195
Query 136 QIQEVK 141
QIQE+K
Sbjct 196 QIQEIK 201
> pfa:PF10_0081 26S proteasome regulatory subunit 4, putative;
K03062 26S proteasome regulatory subunit T2
Length=448
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 115/126 (91%), Gaps = 1/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+EEEYI+NQEQ K ++++N ++ ++D+LRGSP+SVGTLE LID+ H I+++S+GPEYY
Sbjct 82 LLEEEYITNQEQIKSSDDKNYVKL-KIDDLRGSPVSVGTLEELIDENHGIIATSVGPEYY 140
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
VNILSFVDKDLLEPGCSVLL+NKT+S+VGIL DEVDPL+SVMKVEKAPLE+Y DIGGLE
Sbjct 141 VNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLES 200
Query 136 QIQEVK 141
QIQE+K
Sbjct 201 QIQEIK 206
> bbo:BBOV_IV009290 23.m06008; 26S protease regulatory subunit
4; K03062 26S proteasome regulatory subunit T2
Length=438
Score = 190 bits (483), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 113/126 (89%), Gaps = 0/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+EEEY++N+ + P + +N++++ R+++LRGSP+SVGT+E +IDD HAIV+SS+GPEYY
Sbjct 71 LLEEEYVANKIRLNPTKNKNQDDLLRLEDLRGSPMSVGTMEEMIDDNHAIVTSSMGPEYY 130
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
VNILSFVDK LLEPGCSVLLHNKT+S+VGIL D +DPL+S+MKVE+APLE+Y DIGGLE
Sbjct 131 VNILSFVDKTLLEPGCSVLLHNKTNSVVGILLDAIDPLVSLMKVERAPLESYSDIGGLED 190
Query 136 QIQEVK 141
QIQE+K
Sbjct 191 QIQEIK 196
> dre:415181 psmc1b, wu:fj14c10, zgc:86923; proteasome (prosome,
macropain) 26S subunit, ATPase, 1b; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 111/126 (88%), Gaps = 0/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+EEE+I NQEQ KP EE+ EEE S+VD+LRG+P+SVGTLE +IDD HAIVS+S+G E+Y
Sbjct 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHY 132
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V+ILSFVDKDLLEPGCSVLL++K +++G+L D+ DPL++VMKVEKAP ETY DIGGL+
Sbjct 133 VSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDN 192
Query 136 QIQEVK 141
QIQE+K
Sbjct 193 QIQEIK 198
> mmu:19179 Psmc1, AI325227, P26s4, S4; protease (prosome, macropain)
26S subunit, ATPase 1; K03062 26S proteasome regulatory
subunit T2
Length=440
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 111/126 (88%), Gaps = 0/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+EEE+I NQEQ KP EE+ EEE S+VD+LRG+P+SVGTLE +IDD HAIVS+S+G E+Y
Sbjct 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHY 132
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V+ILSFVDKDLLEPGCSVLL++K +++G+L D+ DPL++VMKVEKAP ETY DIGGL+
Sbjct 133 VSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDN 192
Query 136 QIQEVK 141
QIQE+K
Sbjct 193 QIQEIK 198
> hsa:5700 PSMC1, MGC24583, MGC8541, P26S4, S4, p56; proteasome
(prosome, macropain) 26S subunit, ATPase, 1; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 111/126 (88%), Gaps = 0/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+EEE+I NQEQ KP EE+ EEE S+VD+LRG+P+SVGTLE +IDD HAIVS+S+G E+Y
Sbjct 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHY 132
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V+ILSFVDKDLLEPGCSVLL++K +++G+L D+ DPL++VMKVEKAP ETY DIGGL+
Sbjct 133 VSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDN 192
Query 136 QIQEVK 141
QIQE+K
Sbjct 193 QIQEIK 198
> xla:380240 psmc1, MGC64535, pros26.4; proteasome (prosome, macropain)
26S subunit, ATPase, 1; K03062 26S proteasome regulatory
subunit T2
Length=440
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 111/126 (88%), Gaps = 0/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+EEE+I NQEQ KP EE+ EEE S+VD+LRG+P+SVGTLE +IDD HAIVS+S+G E+Y
Sbjct 73 LMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHY 132
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V+ILSFVDKDLLEPGCSVLL++K +++G+L D+ DPL++VMKVEKAP ETY DIGGL+
Sbjct 133 VSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDN 192
Query 136 QIQEVK 141
QIQE+K
Sbjct 193 QIQEIK 198
> dre:336786 psmc1a, psmc1, wu:fb05d04, zgc:56516; proteasome
(prosome, macropain) 26S subunit, ATPase, 1a; K03062 26S proteasome
regulatory subunit T2
Length=440
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/126 (69%), Positives = 111/126 (88%), Gaps = 0/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+EEE+I +QEQ KP EE+ EEE S+VD+LRG+P+SVGTLE +IDD HAIVS+S+G E+Y
Sbjct 73 LMEEEFIRDQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHY 132
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V+ILSFVDKDLLEPGCSVLL++K +++G+L D+ DPL++VMKVEKAP ETY DIGGL+
Sbjct 133 VSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDS 192
Query 136 QIQEVK 141
QIQE+K
Sbjct 193 QIQEIK 198
> cpv:cgd4_1170 26S proteasome regulatory subunit S4 like AAA
ATpase ; K03062 26S proteasome regulatory subunit T2
Length=445
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/146 (61%), Positives = 118/146 (80%), Gaps = 5/146 (3%)
Query 1 MPNAASEVRTRQ-----GLPLVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTL 55
+PNA +R + ++E+E+I++ E KP+ E EEE ++VD+LRGSP+++GTL
Sbjct 58 VPNAKCRLRLLKYERIKDYLMMEQEFITSMESVKPSAETAEEEHNKVDDLRGSPMNIGTL 117
Query 56 EGLIDDQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLIS 115
E +ID+ HAIVSSS+G EYYVNILSFVDK+ LEPG SVLLHNK S+VGI++DEVDPL+S
Sbjct 118 EEIIDENHAIVSSSVGSEYYVNILSFVDKNQLEPGSSVLLHNKVYSVVGIMNDEVDPLVS 177
Query 116 VMKVEKAPLETYGDIGGLEKQIQEVK 141
VMKV+KAPLE+Y DIGGLE+QIQE+K
Sbjct 178 VMKVDKAPLESYADIGGLEQQIQEIK 203
> cel:F29G9.5 rpt-2; proteasome Regulatory Particle, ATPase-like
family member (rpt-2); K03062 26S proteasome regulatory subunit
T2
Length=443
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 113/126 (89%), Gaps = 0/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+E+E+I NQE+ KP EER EEE ++VDELRG+P++VG+LE +IDDQHAIVS+++G E+Y
Sbjct 76 LMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHY 135
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
VNI+SFVDK+ LEPGCSVLL++K +++G+LSD+ DP++SVMK+EKAP ETY D+GGL++
Sbjct 136 VNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQ 195
Query 136 QIQEVK 141
QIQE+K
Sbjct 196 QIQEIK 201
> sce:YDL007W RPT2, YHS4, YTA5; One of six ATPases of the 19S
regulatory particle of the 26S proteasome involved in the degradation
of ubiquitinated substrates; required for normal peptide
hydrolysis by the core 20S particle; K03062 26S proteasome
regulatory subunit T2
Length=437
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 108/126 (85%), Gaps = 0/126 (0%)
Query 16 LVEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
L+EEE++SN E KP E++ EEE +++E+RG+PLS+GTLE +IDD HAIV+S P+YY
Sbjct 70 LLEEEFVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYY 129
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V+ILSFVDK+LLEPGCSVLLH+KT SIVG+L D+ DP++SVMK++K+P E+Y DIGGLE
Sbjct 130 VSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLES 189
Query 136 QIQEVK 141
QIQE+K
Sbjct 190 QIQEIK 195
> cel:F23F12.6 rpt-3; proteasome Regulatory Particle, ATPase-like
family member (rpt-3); K03063 26S proteasome regulatory
subunit T3
Length=414
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 70/106 (66%), Gaps = 3/106 (2%)
Query 36 EEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLL 95
+EEV R+ + PL +G +D HAIV S+ G YYV +LS +D++LL+PGCSV L
Sbjct 72 QEEVKRIQSV---PLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVAL 128
Query 96 HNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVK 141
H ++++V +L E D I +++ ++ P +YGDIGGL+ Q QEV+
Sbjct 129 HKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVR 174
> tpv:TP04_0031 26S proteasome aaa-ATPase subunit Rpt3 (EC:3.6.4.8);
K03063 26S proteasome regulatory subunit T3
Length=396
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 8/128 (6%)
Query 17 VEEEYISNQEQHKPAEE---RNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPE 73
++E YI +E+HK + R E+ R+ + PL +G +ID + IVSS+ G
Sbjct 33 IQENYI--KEEHKNLKLELIRARNEIKRIQSV---PLVIGQFLDIIDKNYGIVSSTAGSN 87
Query 74 YYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGL 133
YYV ILS ++++LL P SV LH + S+V IL E D I +++V + P TY DIGG+
Sbjct 88 YYVRILSTINRELLTPNTSVALHRHSHSVVDILPPEADSSIQMLQVSEKPDVTYADIGGM 147
Query 134 EKQIQEVK 141
+ Q QE+K
Sbjct 148 DSQKQEIK 155
> tgo:TGME49_029950 26S protease regulatory subunit 6b, putative
; K03063 26S proteasome regulatory subunit T3
Length=409
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query 17 VEEEYISNQEQHKPAE-ERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
++EEYI +++++ E R EE+ R+ + PL +G LI+ IV+S+ G Y
Sbjct 46 IQEEYIKDEQKNLKREFYRAREELKRIQSV---PLVIGQFMELINANEGIVASTAGSSYV 102
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V ILS ++++LL+ GCSV LH + S+V IL E D I +++++ P TY DIGG++
Sbjct 103 VRILSTLNRELLKTGCSVALHRHSHSVVDILPPEADSTIQTLQMQEKPDVTYSDIGGMDI 162
Query 136 QIQEVK 141
Q QE++
Sbjct 163 QKQEIR 168
> bbo:BBOV_II004930 18.m06410; 26s proteasome aaa-ATPase subunit
Rpt3; K03063 26S proteasome regulatory subunit T3
Length=399
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query 17 VEEEYISNQEQHKPAEE-RNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
+E Y+ + ++ E R EE+ R+ + PL +G ++D HAIVSS+ G YY
Sbjct 36 TQENYVREEYKNLKLEMIRAREEIKRIQSV---PLVIGQFLDMVDKNHAIVSSTAGSNYY 92
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V ILS ++++ L P SV LH + SIV +L E D I +M++ P +Y DIGGL+
Sbjct 93 VRILSTINREQLVPNTSVALHRHSHSIVDLLPPEADSSIQMMQISDRPDVSYADIGGLDA 152
Query 136 QIQEVK 141
Q QEV+
Sbjct 153 QKQEVR 158
> cpv:cgd4_2540 26S proteasome regulatory subunit 26b like AAA
ATpase ; K03063 26S proteasome regulatory subunit T3
Length=401
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
Query 17 VEEEYISNQEQHKPAE-ERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
++E+YI ++++ E +R +EE+ R+ + PL +G +ID ++ IVSS+ G YY
Sbjct 38 IQEDYIKDEQKGLKREFQRAKEEIKRIQSV---PLVIGQFLEMIDSRYGIVSSTAGSNYY 94
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V +LS ++++ L+P SV LH + +IV IL E D I ++++++ P TY DIGG++
Sbjct 95 VRVLSTINREDLKPPASVALHRHSHAIVDILPPEADSSIQMLQMQEKPDVTYSDIGGMDI 154
Query 136 QIQEVK 141
Q QEV+
Sbjct 155 QKQEVR 160
> sce:YDR394W RPT3, YNT1, YTA2; One of six ATPases of the 19S
regulatory particle of the 26S proteasome involved in the degradation
of ubiquitinated substrates; substrate of N-acetyltransferase
B; K03063 26S proteasome regulatory subunit T3
Length=428
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query 17 VEEEYISNQEQHKPAE-ERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
++E+YI ++++H E +R +EEV R+ + PL +G ID IVSS+ G Y
Sbjct 63 LQEDYIKDEQRHLKRELKRAQEEVKRIQSV---PLVIGQFLEPIDQNTGIVSSTTGMSYV 119
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V ILS +D++LL+P SV LH ++++V IL + D ISVM + P TY D+GGL+
Sbjct 120 VRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDM 179
Query 136 QIQEVK 141
Q QE++
Sbjct 180 QKQEIR 185
> xla:398853 psmc4, MGC68784; proteasome (prosome, macropain)
26S subunit, ATPase, 4; K03063 26S proteasome regulatory subunit
T3
Length=420
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query 17 VEEEYISNQEQHKPAEERN-EEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
V+EEYI +++++ E + +EEV R+ + PL +G +D AIV S+ G YY
Sbjct 58 VQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQNTAIVGSTTGSNYY 114
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V ILS +D++LL+P SV LH ++++V +L E D I+++ ++ P Y DIGG++
Sbjct 115 VRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSITMLTADQKPDVLYSDIGGMDI 174
Query 136 QIQEVK 141
Q QEV+
Sbjct 175 QKQEVR 180
> pfa:PFD0665c 26S proteasome AAA-ATPase subunit RPT3, putative
(EC:3.6.4.8); K03063 26S proteasome regulatory subunit T3
Length=392
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 79/128 (61%), Gaps = 8/128 (6%)
Query 17 VEEEYISNQEQHKPAEE---RNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPE 73
++E+YI +E+HK + R++ E+ R+ + PL +G +ID+ + IVSS+ G
Sbjct 29 IQEDYI--KEEHKNLKRELIRSKNEIKRIQSV---PLIIGQFLDIIDNNYGIVSSTAGSN 83
Query 74 YYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGL 133
YYV ILS ++K+ L+P SV LH + SIV IL E D I ++++ + P Y D+GGL
Sbjct 84 YYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPNVKYTDLGGL 143
Query 134 EKQIQEVK 141
+ Q QE+K
Sbjct 144 DMQKQEMK 151
> hsa:652826 26S protease regulatory subunit 6B-like; K03063 26S
proteasome regulatory subunit T3
Length=414
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query 17 VEEEYISNQEQHKPAEERN-EEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
V+EEYI +++++ E + +EEV R+ + PL +G +D AIV S+ G YY
Sbjct 52 VQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQNTAIVGSTTGSNYY 108
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V ILS +D++LL+P SV LH ++++V +L E D I ++ ++ P Y DIGG++
Sbjct 109 VRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDI 168
Query 136 QIQEVK 141
Q QEV+
Sbjct 169 QKQEVR 174
> hsa:5704 PSMC4, MGC13687, MGC23214, MGC8570, MIP224, S6, TBP7;
proteasome (prosome, macropain) 26S subunit, ATPase, 4; K03063
26S proteasome regulatory subunit T3
Length=418
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query 17 VEEEYISNQEQHKPAEERN-EEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
V+EEYI +++++ E + +EEV R+ + PL +G +D AIV S+ G YY
Sbjct 56 VQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQNTAIVGSTTGSNYY 112
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V ILS +D++LL+P SV LH ++++V +L E D I ++ ++ P Y DIGG++
Sbjct 113 VRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDI 172
Query 136 QIQEVK 141
Q QEV+
Sbjct 173 QKQEVR 178
> mmu:23996 Psmc4, CIP21, MGC103150, MIP224; proteasome (prosome,
macropain) 26S subunit, ATPase, 4; K03063 26S proteasome
regulatory subunit T3
Length=418
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query 17 VEEEYISNQEQHKPAEERN-EEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
V+EEYI +++++ E + +EEV R+ + PL +G +D AIV S+ G YY
Sbjct 56 VQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQNTAIVGSTTGSNYY 112
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V ILS +D++LL+P SV LH ++++V +L E D I ++ ++ P Y DIGG++
Sbjct 113 VRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDI 172
Query 136 QIQEVK 141
Q QEV+
Sbjct 173 QKQEVR 178
> ath:AT5G58290 RPT3; RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE
3); ATPase; K03063 26S proteasome regulatory subunit T3
Length=408
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query 17 VEEEYISNQEQHKPAEE-RNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
++EEY+ +++++ E R +EEV R+ + PL +G ++D + IV S+ G YY
Sbjct 46 IQEEYVKDEQKNLKRELLRAQEEVKRIQSV---PLVIGQFMEMVDQNNGIVGSTTGSNYY 102
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V ILS ++++LL+P SV LH ++++V +L E D IS++ + P +Y DIGG +
Sbjct 103 VRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDI 162
Query 136 QIQEVK 141
Q QE++
Sbjct 163 QKQEIR 168
> dre:326884 psmc4, wu:fe38b10, zgc:63709; proteasome (prosome,
macropain) 26S subunit, ATPase, 4; K03063 26S proteasome regulatory
subunit T3
Length=418
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query 17 VEEEYISNQEQHKPAEERN-EEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYY 75
V+EEYI +++++ E + +EEV R+ + PL +G +D AIV S+ G YY
Sbjct 56 VQEEYIKDEQKNLKKEFLHAQEEVKRIQSI---PLVIGQFLEAVDQNTAIVGSTTGSNYY 112
Query 76 VNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEK 135
V ILS +D++LL+P SV LH ++++V +L E D I ++ ++ P Y DIGG++
Sbjct 113 VRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDI 172
Query 136 QIQEVK 141
Q QEV+
Sbjct 173 QKQEVR 178
> cel:C10G11.8 ATPase; hypothetical protein; K03062 26S proteasome
regulatory subunit T2
Length=438
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 77/135 (57%), Gaps = 10/135 (7%)
Query 17 VEEEYISNQEQH--KPAEERNEEEVSRVDELRGSPLSVGTLEGLIDD-QHAIVS-SSIGP 72
+E+E+I+ Q +P + E V LRG+P ++ + L DD +HA+V
Sbjct 62 LEKEFITRQTSRHGRPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKHAVVVVEGSRR 121
Query 73 EYYVNILSFVDKDLLEPGCSVLLHN----KT--SSIVGILSDEVDPLISVMKVEKAPLET 126
E+YV ILS VDKDLL V++ KT S+IVG+L D++D KVEK P ET
Sbjct 122 EWYVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHKVEKTPKET 181
Query 127 YGDIGGLEKQIQEVK 141
+ DIGG E QIQE+K
Sbjct 182 FDDIGGCESQIQELK 196
> xla:443908 psmc5, MGC53028, MGC80185, sug-1, sug1, tbp10; proteasome
(prosome, macropain) 26S subunit, ATPase, 5; K03066
26S proteasome regulatory subunit T6
Length=415
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 0/90 (0%)
Query 52 VGTLEGLIDDQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVD 111
VG + +D + +V ++ V++ +D + + P C V L N + ++ IL ++VD
Sbjct 82 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 141
Query 112 PLISVMKVEKAPLETYGDIGGLEKQIQEVK 141
PL+S+M VEK P TY IGGL+KQI+E+K
Sbjct 142 PLVSLMMVEKVPDSTYEMIGGLDKQIKEIK 171
> mmu:19184 Psmc5, mSUG1; protease (prosome, macropain) 26S subunit,
ATPase 5; K03066 26S proteasome regulatory subunit T6
Length=406
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 0/90 (0%)
Query 52 VGTLEGLIDDQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVD 111
VG + +D + +V ++ V++ +D + + P C V L N + ++ IL ++VD
Sbjct 73 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
Query 112 PLISVMKVEKAPLETYGDIGGLEKQIQEVK 141
PL+S+M VEK P TY IGGL+KQI+E+K
Sbjct 133 PLVSLMMVEKVPDSTYEMIGGLDKQIKEIK 162
> hsa:5705 PSMC5, S8, SUG-1, SUG1, TBP10, TRIP1, p45, p45/SUG;
proteasome (prosome, macropain) 26S subunit, ATPase, 5; K03066
26S proteasome regulatory subunit T6
Length=398
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 0/90 (0%)
Query 52 VGTLEGLIDDQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVD 111
VG + +D + +V ++ V++ +D + + P C V L N + ++ IL ++VD
Sbjct 65 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 124
Query 112 PLISVMKVEKAPLETYGDIGGLEKQIQEVK 141
PL+S+M VEK P TY IGGL+KQI+E+K
Sbjct 125 PLVSLMMVEKVPDSTYEMIGGLDKQIKEIK 154
> dre:445285 psmc5, wu:fa14g03, wu:fb23a11, zgc:92464; proteasome
(prosome, macropain) 26S subunit, ATPase, 5; K03066 26S
proteasome regulatory subunit T6
Length=406
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 0/90 (0%)
Query 52 VGTLEGLIDDQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVD 111
VG + +D + +V ++ V++ +D + + P C V L N + ++ IL ++VD
Sbjct 73 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
Query 112 PLISVMKVEKAPLETYGDIGGLEKQIQEVK 141
PL+S+M VEK P TY IGGL+KQI+E+K
Sbjct 133 PLVSLMMVEKVPDSTYEMIGGLDKQIKEIK 162
> xla:397968 psmc5, xsug1; XSUG1 protein; K03066 26S proteasome
regulatory subunit T6
Length=461
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 0/90 (0%)
Query 52 VGTLEGLIDDQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVD 111
VG + +D + +V ++ V++ +D + + P C V L N + ++ IL ++VD
Sbjct 68 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 127
Query 112 PLISVMKVEKAPLETYGDIGGLEKQIQEVK 141
PL+S+M VEK P TY IGGL+KQI+E+K
Sbjct 128 PLVSLMMVEKVPDSTYEMIGGLDKQIKEIK 157
> tpv:TP02_0893 26S proteasome regulatory subunit; K03066 26S
proteasome regulatory subunit T6
Length=393
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 70/117 (59%), Gaps = 10/117 (8%)
Query 33 ERNEEEVSRVDELRG---SPLSVGTLEG-----LIDDQHAIVSSSIGPEYYVNILSFVDK 84
+RNE + RV EL+ S L G+ G + +D+ +V S+ +Y V++ S +D
Sbjct 35 QRNELNL-RVRELKDELHSLLESGSFVGEVVKSMCNDK-ILVKISLEGKYVVDLASDIDV 92
Query 85 DLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVK 141
+L+ P V L + + + IL +VDPL+++MKVEK P TY +GGLE+QI++VK
Sbjct 93 NLVTPNTRVALMSDSYKLHKILPTKVDPLVALMKVEKVPDSTYDMVGGLEEQIKQVK 149
> cel:F56F11.4 hypothetical protein; K03066 26S proteasome regulatory
subunit T6
Length=432
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query 36 EEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLL 95
+EE+S + E +GS VG + +D + +V + +Y V++ + VD L G V L
Sbjct 86 KEEISHLHE-QGS--HVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVAL 142
Query 96 HNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVK 141
+I +L +VDPL+S+M VEK P TY +GGL+ QI+E+K
Sbjct 143 RADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIK 188
> pfa:PFL2345c tat-binding protein homolog; K03066 26S proteasome
regulatory subunit T6
Length=435
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query 70 IGPE--YYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETY 127
I PE Y V+I ++ P V L+N + + IL +VDPL+S+MKVEK P TY
Sbjct 119 INPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTY 178
Query 128 GDIGGLEKQIQEVK 141
+GGL++Q++EVK
Sbjct 179 EMVGGLDQQVKEVK 192
> cel:Y49E10.1 rpt-6; proteasome Regulatory Particle, ATPase-like
family member (rpt-6); K03066 26S proteasome regulatory
subunit T6
Length=416
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 0/90 (0%)
Query 52 VGTLEGLIDDQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVD 111
VG + +D + +V +Y V++ +D + L G V L + ++ +L ++VD
Sbjct 83 VGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVD 142
Query 112 PLISVMKVEKAPLETYGDIGGLEKQIQEVK 141
PL+S+M VEK P TY +GGL+KQI+E+K
Sbjct 143 PLVSLMMVEKVPDSTYEMVGGLDKQIKEIK 172
> tpv:TP04_0152 26S proteasome regulatory subunit; K03064 26S
proteasome regulatory subunit T4
Length=415
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query 52 VGTLEGLIDDQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVD 111
VG + IDD IV +S GP Y V +D +LL+ G V L T +I+ +L EVD
Sbjct 77 VGNVLRKIDDNKYIVKASSGPRYVVCCKVNIDVNLLKSGTRVALDMTTLTIMKVLPREVD 136
Query 112 PLISVM------KVEKAPLETYGDIGGLEKQIQEVK 141
P+I M + +TY IGGL KQI+E++
Sbjct 137 PIIYNMLNKDDNAKDNKDKDTYNSIGGLNKQIKEMR 172
> ath:AT5G20000 26S proteasome AAA-ATPase subunit, putative; K03066
26S proteasome regulatory subunit T6
Length=419
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 0/69 (0%)
Query 73 EYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGG 132
+Y V+I +D L P V L N + + +L +VDPL+++MKVEK P TY IGG
Sbjct 106 KYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGG 165
Query 133 LEKQIQEVK 141
L++QI+E+K
Sbjct 166 LDQQIKEIK 174
> cpv:cgd8_840 26S proteasome regulatory subunit S10b like AAA+
ATpase ; K03064 26S proteasome regulatory subunit T4
Length=406
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 0/83 (0%)
Query 59 IDDQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMK 118
+DD+ IV +S GP Y V S +DK L G V L T +I+ L EVDP++ M
Sbjct 81 LDDEKCIVKASTGPRYVVGCRSKLDKSKLTSGTRVALDATTLTIMRRLPREVDPMVYNML 140
Query 119 VEKAPLETYGDIGGLEKQIQEVK 141
E +Y +GGL +QI+E++
Sbjct 141 HEDPGSVSYSQVGGLNEQIREIR 163
> mmu:19182 Psmc3, TBP-1; proteasome (prosome, macropain) 26S
subunit, ATPase 3; K03065 26S proteasome regulatory subunit
T5
Length=442
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 0/77 (0%)
Query 64 AIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAP 123
A++ +S Y++ ++ VD + L+PG V ++ + I+ L E D + M+V++ P
Sbjct 125 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERP 184
Query 124 LETYGDIGGLEKQIQEV 140
E Y DIGGL+KQIQE+
Sbjct 185 TEQYSDIGGLDKQIQEL 201
> hsa:5702 PSMC3, MGC8487, TBP1; proteasome (prosome, macropain)
26S subunit, ATPase, 3; K03065 26S proteasome regulatory
subunit T5
Length=439
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 0/77 (0%)
Query 64 AIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAP 123
A++ +S Y++ ++ VD + L+PG V ++ + I+ L E D + M+V++ P
Sbjct 122 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERP 181
Query 124 LETYGDIGGLEKQIQEV 140
E Y DIGGL+KQIQE+
Sbjct 182 TEQYSDIGGLDKQIQEL 198
> xla:379370 psmc3, MGC53343, psmc3-b, tbp10; proteasome (prosome,
macropain) 26S subunit, ATPase, 3; K03065 26S proteasome
regulatory subunit T5
Length=423
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 0/77 (0%)
Query 64 AIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAP 123
A++ +S Y++ ++ VD + L+PG V ++ + I+ L E D + M+V++ P
Sbjct 106 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERP 165
Query 124 LETYGDIGGLEKQIQEV 140
E Y DIGGL+KQIQE+
Sbjct 166 TEQYSDIGGLDKQIQEL 182
> ath:AT5G19990 RPT6A; RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE
6A); ATPase; K03066 26S proteasome regulatory subunit T6
Length=419
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 0/69 (0%)
Query 73 EYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGG 132
+Y V+I +D + P V L N + + +L +VDPL+++MKVEK P TY IGG
Sbjct 106 KYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGG 165
Query 133 LEKQIQEVK 141
L++QI+E+K
Sbjct 166 LDQQIKEIK 174
> xla:379941 nthl1, MGC64280, psmc3, psmc3-a; nth endonuclease
III-like 1 (EC:4.2.99.18); K03065 26S proteasome regulatory
subunit T5
Length=405
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 0/77 (0%)
Query 64 AIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAP 123
A++ +S Y++ ++ VD + L+PG V ++ + I+ L E D + M+V++ P
Sbjct 106 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERP 165
Query 124 LETYGDIGGLEKQIQEV 140
E Y DIGGL+KQIQE+
Sbjct 166 TEQYSDIGGLDKQIQEL 182
> dre:321947 psmc3, wu:fb39a02, zgc:86713; proteasome (prosome,
macropain) 26S subunit, ATPase, 3; K03065 26S proteasome regulatory
subunit T5
Length=404
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 0/77 (0%)
Query 64 AIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAP 123
A++ +S Y++ ++ VD + L+PG V ++ + I+ L E D + M+V++ P
Sbjct 87 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERP 146
Query 124 LETYGDIGGLEKQIQEV 140
E Y DIGGL+KQIQE+
Sbjct 147 TEQYSDIGGLDKQIQEL 163
> bbo:BBOV_I000480 16.m00708; tat-binding protein-like protein;
K03066 26S proteasome regulatory subunit T6
Length=405
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query 25 QEQHKPAEERNE--EEVSRVDELRGSPLSVGTLEGLIDDQHA----IVSSSIGPEYYVNI 78
Q + + +RNE +V + + + L G+ G + Q +V S+ +Y V++
Sbjct 40 QTRRRLVAQRNELNAKVRALKDELHALLESGSFVGEVVKQMCQDKVLVKISLEGKYVVDV 99
Query 79 LSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQ 138
VD P V L + + + IL +VDPL+++MKVEK P TY +GGLE+Q++
Sbjct 100 SKDVDISKCTPSTRVALMSDSYKLHKILPTKVDPLVALMKVEKVPDSTYEMVGGLEQQVK 159
Query 139 EVK 141
EVK
Sbjct 160 EVK 162
> ath:AT5G43010 RPT4A; RPT4A; ATPase; K03064 26S proteasome regulatory
subunit T4
Length=399
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query 20 EYISNQEQHKPAEER----------NEEEVSRVDELRGSPLSVGTLEGLI----DDQHAI 65
EY QHK E R ++E ++ ++ S SVG + G + D++ I
Sbjct 17 EYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLI 76
Query 66 VSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLE 125
V +S GP Y V S VDK+ L G V+L T +I+ L EVDP++ M E
Sbjct 77 VKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNI 136
Query 126 TYGDIGGLEKQIQEVK 141
+Y +GGL QI+E++
Sbjct 137 SYSAVGGLGDQIRELR 152
> dre:100330292 26S protease regulatory subunit S10B-like
Length=350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 0/117 (0%)
Query 25 QEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYYVNILSFVDK 84
+EQ K ++ E+ + + L+ VG + + ++ IV ++ GP Y V +DK
Sbjct 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89
Query 85 DLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVK 141
L+PG V L T +I+ L EVDPL+ M E +Y +IGGL +QI+E++
Sbjct 90 SKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELR 146
> dre:321585 psmc6, MGC101799, fb20g04, wu:fb20g04, wu:fc85c10;
proteasome (prosome, macropain) 26S subunit, ATPase, 6; K03064
26S proteasome regulatory subunit T4
Length=389
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 0/117 (0%)
Query 25 QEQHKPAEERNEEEVSRVDELRGSPLSVGTLEGLIDDQHAIVSSSIGPEYYVNILSFVDK 84
+EQ K ++ E+ + + L+ VG + + ++ IV ++ GP Y V +DK
Sbjct 30 REQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDK 89
Query 85 DLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVK 141
L+PG V L T +I+ L EVDPL+ M E +Y +IGGL +QI+E++
Sbjct 90 SKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELR 146
Lambda K H
0.309 0.132 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2618291680
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40