bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
164,496 sequences; 82,071,388 total letters
Query= Emax_3262_orf2
Length=53
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_007680 S-phase kinase-associated protein, putative ... 68.2 5e-12
tpv:TP03_0225 hypothetical protein; K03094 S-phase kinase-asso... 55.1 6e-08
hsa:100506332 s-phase kinase-associated protein 1-like; K03094... 49.7 2e-06
cpv:cgd7_2500 Skp1 family protein ; K03094 S-phase kinase-asso... 47.0 1e-05
hsa:6500 SKP1, EMC19, MGC34403, OCP-II, OCP2, SKP1A, TCEB1L, p... 46.2 3e-05
dre:393716 skp1, MGC73186, skp1a, zgc:73186; S-phase kinase-as... 45.8 3e-05
xla:380538 skp1, MGC64317, skp1a; S-phase kinase-associated pr... 45.8 3e-05
mmu:21402 Skp1a, 15kDa, 2610043E24Rik, 2610206H23Rik, EMC19, O... 45.8 3e-05
ath:AT3G60020 ASK5; ASK5 (ARABIDOPSIS SKP1-LIKE 5); protein bi... 45.4 4e-05
cel:Y60A3A.18 skr-4; SKp1 Related (ubiquitin ligase complex co... 45.4 4e-05
pfa:MAL13P1.337 Skp1 family protein, putative; K03094 S-phase ... 40.8 0.001
ath:AT5G42190 ASK2; ASK2 (ARABIDOPSIS SKP1-LIKE 2); protein bi... 39.7 0.003
ath:AT4G34210 ASK11; ASK11 (ARABIDOPSIS SKP1-LIKE 11); protein... 38.9 0.005
ath:AT1G20140 ASK4; ASK4 (ARABIDOPSIS SKP1-LIKE 4); protein bi... 38.5 0.005
cel:F46A9.5 skr-1; SKp1 Related (ubiquitin ligase complex comp... 38.5 0.005
ath:AT3G21860 ASK10; ASK10 (ARABIDOPSIS SKP1-LIKE 10); protein... 38.5 0.005
ath:AT2G25700 ASK3; ASK3 (ARABIDOPSIS SKP1-LIKE 3); protein bi... 38.1 0.006
ath:AT1G75950 SKP1; SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)... 37.4 0.011
cel:F44G3.6 skr-3; SKp1 Related (ubiquitin ligase complex comp... 37.4 0.013
ath:AT3G53060 ASK6; ASK6 (ARABIDOPSIS SKP1-LIKE 6); protein bi... 37.0 0.014
ath:AT4G34470 ASK12; ASK12 (ARABIDOPSIS SKP1-LIKE 12); protein... 36.6 0.020
ath:AT3G21850 ASK9; ASK9 (ARABIDOPSIS SKP1-LIKE 9); protein bi... 36.6 0.021
bbo:BBOV_IV006860 23.m05921; cytosolic glycoprotein FP21; K030... 35.8 0.034
ath:AT2G03160 ASK19; ASK19 (ARABIDOPSIS SKP1-LIKE 19); protein... 35.8 0.035
ath:AT3G60010 ASK13; ASK13 (ARABIDOPSIS SKP1-LIKE 13); protein... 35.0 0.053
sce:YDR328C SKP1, MGO1; Evolutionarily conserved kinetochore p... 34.7 0.079
cel:F47H4.10 skr-5; SKp1 Related (ubiquitin ligase complex com... 33.9 0.12
cel:F46A9.4 skr-2; SKp1 Related (ubiquitin ligase complex comp... 33.5 0.16
ath:AT3G21840 ASK7; ASK7 (ARABIDOPSIS SKP1-LIKE 7); protein bi... 33.5 0.16
cel:Y37H2C.2 skr-6; SKp1 Related (ubiquitin ligase complex com... 33.1 0.23
cel:F54D10.1 skr-15; SKp1 Related (ubiquitin ligase complex co... 33.1 0.23
ath:AT1G10230 ASK18; ASK18 (ARABIDOPSIS SKP1-LIKE 18); protein... 33.1 0.25
ath:AT3G21830 ASK8; ASK8 (ARABIDOPSIS SKP1-LIKE 8); protein bi... 30.8 1.2
cel:R12H7.3 skr-19; SKp1 Related (ubiquitin ligase complex com... 30.4 1.3
ath:AT2G03170 ASK14; ASK14 (ARABIDOPSIS SKP1-LIKE 14); protein... 30.4 1.5
ath:AT3G25650 ASK15; ASK15 (ARABIDOPSIS SKP1-LIKE 15); protein... 30.4 1.5
cel:C52D10.9 skr-8; SKp1 Related (ubiquitin ligase complex com... 29.3 2.9
cel:Y105C5B.13 skr-10; SKp1 Related (ubiquitin ligase complex ... 29.3 3.2
cel:Y47D7A.1 skr-7; SKp1 Related (ubiquitin ligase complex com... 28.1 7.4
ath:AT1G80740 CMT1; CMT1 (CHROMOMETHYLASE 1); DNA binding / ch... 27.7 8.5
cel:C52D10.7 skr-9; SKp1 Related (ubiquitin ligase complex com... 27.7 8.5
ath:AT2G03190 ASK16; ASK16 (ARABIDOPSIS SKP1-LIKE 16); protein... 27.7 9.5
> tgo:TGME49_007680 S-phase kinase-associated protein, putative
; K03094 S-phase kinase-associated protein 1
Length=170
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query 2 EVASASLLVKSMTE-DGDDTDVVPLPKVSSYILKKVVEYCTHHHDNPPEDIP 52
EVAS S L+K+M E D D + +PLP V + ILKK++EYC HHH+NPPE+IP
Sbjct 27 EVASMSALIKTMVEEDSDCQESIPLPNVDTCILKKIIEYCEHHHNNPPEEIP 78
> tpv:TP03_0225 hypothetical protein; K03094 S-phase kinase-associated
protein 1
Length=182
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query 1 REVASASLLVKSMTEDGDD-TDVVPLPKVSSYILKKVVEYCTHHHDNPPEDIP 52
R+V S ++K++ D DD T+ +PLP + + +L K++EYC HH++NPP IP
Sbjct 22 RDVICMSNVIKNILNDIDDETEPIPLPNIKTNVLNKIIEYCKHHYNNPPSQIP 74
> hsa:100506332 s-phase kinase-associated protein 1-like; K03094
S-phase kinase-associated protein 1
Length=163
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Query 2 EVASASLLVKSMTED-----GDDTDVVPLPKVSSYILKKVVEYCTHHHDNPP 48
E+ S+ +K+M ED D D VPLP V++ ILKKV+++CTHH D+ P
Sbjct 19 EIVKQSVTIKTMLEDLGMNDEGDHDPVPLPNVNAAILKKVIQWCTHHEDDSP 70
> cpv:cgd7_2500 Skp1 family protein ; K03094 S-phase kinase-associated
protein 1
Length=162
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query 3 VASASLLVKSMTE-DGDDTDVVPLPKVSSYILKKVVEYCTHHHDNPPEDIP 52
VA+AS LV+++ E D D VPLP V +L+KV++YC +H DNP ++IP
Sbjct 22 VATASTLVRNIIEADVGIDDPVPLPNVRGDVLRKVLDYCEYHVDNPSKEIP 72
> hsa:6500 SKP1, EMC19, MGC34403, OCP-II, OCP2, SKP1A, TCEB1L,
p19A; S-phase kinase-associated protein 1 (EC:3.1.1.3); K03094
S-phase kinase-associated protein 1
Length=160
Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 7/48 (14%)
Query 2 EVASASLLVKSMTED------GDDTDVVPLPKVSSYILKKVVEYCTHH 43
E+A S+ +K+M ED GDD D VPLP V++ ILKKV+++CTHH
Sbjct 19 EIAKQSVTIKTMLEDLGMDDEGDD-DPVPLPNVNAAILKKVIQWCTHH 65
> dre:393716 skp1, MGC73186, skp1a, zgc:73186; S-phase kinase-associated
protein 1 (EC:3.1.1.3); K03094 S-phase kinase-associated
protein 1
Length=163
Score = 45.8 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 7/48 (14%)
Query 2 EVASASLLVKSMTED------GDDTDVVPLPKVSSYILKKVVEYCTHH 43
E+A S+ +K+M ED GDD D VPLP V++ ILKKV+++CTHH
Sbjct 19 EIAKQSVTIKTMLEDLGMDDEGDD-DPVPLPNVNAAILKKVIQWCTHH 65
> xla:380538 skp1, MGC64317, skp1a; S-phase kinase-associated
protein 1 (EC:3.1.1.3); K03094 S-phase kinase-associated protein
1
Length=163
Score = 45.8 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 7/48 (14%)
Query 2 EVASASLLVKSMTED------GDDTDVVPLPKVSSYILKKVVEYCTHH 43
E+A S+ +K+M ED GDD D VPLP V++ ILKKV+++CTHH
Sbjct 19 EIAKQSVTIKTMLEDLGMDDEGDD-DPVPLPNVNAAILKKVIQWCTHH 65
> mmu:21402 Skp1a, 15kDa, 2610043E24Rik, 2610206H23Rik, EMC19,
OCP-II, OCP2, SKP1, Tceb1l, p19A, p19Skp1; S-phase kinase-associated
protein 1A (EC:3.1.1.3); K03094 S-phase kinase-associated
protein 1
Length=163
Score = 45.8 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 7/48 (14%)
Query 2 EVASASLLVKSMTED------GDDTDVVPLPKVSSYILKKVVEYCTHH 43
E+A S+ +K+M ED GDD D VPLP V++ ILKKV+++CTHH
Sbjct 19 EIAKQSVTIKTMLEDLGMDDEGDD-DPVPLPNVNAAILKKVIQWCTHH 65
> ath:AT3G60020 ASK5; ASK5 (ARABIDOPSIS SKP1-LIKE 5); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=153
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 0/49 (0%)
Query 2 EVASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHHDNPPED 50
+VA S+ + M EDG TDV+PL V+S ILK V++YC H + E+
Sbjct 20 DVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHVKSKEEE 68
> cel:Y60A3A.18 skr-4; SKp1 Related (ubiquitin ligase complex
component) family member (skr-4); K03094 S-phase kinase-associated
protein 1
Length=159
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query 1 REVASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHHDNPPEDI 51
R+V S S + T + D +PLPKV+S IL+K++ +C HH D+ P+ +
Sbjct 24 RKVISQSKTISGFTSE----DTIPLPKVTSAILEKIITWCEHHADDEPKKV 70
> pfa:MAL13P1.337 Skp1 family protein, putative; K03094 S-phase
kinase-associated protein 1
Length=162
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query 1 REVASASLLVKSMTE-DGDDTDVVPLPKVSSYILKKVVEYCTHHHDNPPEDIP 52
+ AS S ++ ++ E + D +PLP + + ILKK++EY +H +NP ++IP
Sbjct 20 KNTASMSTVIMNILEVMTAEEDTIPLPNIKTPILKKIIEYMEYHINNPADEIP 72
> ath:AT5G42190 ASK2; ASK2 (ARABIDOPSIS SKP1-LIKE 2); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=171
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 0/41 (0%)
Query 3 VASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHH 43
VA S +K M ED + +PLP V+S IL KV+EYC H
Sbjct 23 VALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRH 63
> ath:AT4G34210 ASK11; ASK11 (ARABIDOPSIS SKP1-LIKE 11); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=152
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 0/42 (0%)
Query 3 VASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHH 44
VA S + M ED D +PL V S IL KV+EYC HH
Sbjct 22 VAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHH 63
> ath:AT1G20140 ASK4; ASK4 (ARABIDOPSIS SKP1-LIKE 4); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=163
Score = 38.5 bits (88), Expect = 0.005, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 0/47 (0%)
Query 3 VASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHHDNPPE 49
VA S +K M ED + +PLP V+ IL KV+EYC H + E
Sbjct 24 VAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAAE 70
> cel:F46A9.5 skr-1; SKp1 Related (ubiquitin ligase complex component)
family member (skr-1); K03094 S-phase kinase-associated
protein 1
Length=176
Score = 38.5 bits (88), Expect = 0.005, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
Query 15 EDGDDTDVVPLPKVSSYILKKVVEYCTHHHDNP 47
E+G + + +P+ V++ ILKKV+ +C HHH +P
Sbjct 51 EEGTNAEPIPVQNVTASILKKVISWCNHHHSDP 83
> ath:AT3G21860 ASK10; ASK10 (ARABIDOPSIS SKP1-LIKE 10); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=152
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 0/44 (0%)
Query 1 REVASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHH 44
E A + M+ED + +PLP+V+ IL+ V+EYC HH
Sbjct 20 EEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKHH 63
> ath:AT2G25700 ASK3; ASK3 (ARABIDOPSIS SKP1-LIKE 3); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=163
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 0/47 (0%)
Query 3 VASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHHDNPPE 49
VA S +K M ED + +PLP V+ IL KV+EYC H + E
Sbjct 24 VAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAAAE 70
> ath:AT1G75950 SKP1; SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN
1); protein binding / ubiquitin-protein ligase; K03094 S-phase
kinase-associated protein 1
Length=160
Score = 37.4 bits (85), Expect = 0.011, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 0/41 (0%)
Query 3 VASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHH 43
VA S + M ED + VPLP V+S IL KV+EYC H
Sbjct 22 VALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRH 62
> cel:F44G3.6 skr-3; SKp1 Related (ubiquitin ligase complex component)
family member (skr-3); K03094 S-phase kinase-associated
protein 1
Length=167
Score = 37.4 bits (85), Expect = 0.013, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 0/31 (0%)
Query 21 DVVPLPKVSSYILKKVVEYCTHHHDNPPEDI 51
D +PL KV+S IL+K++ +C HH D+ P+ +
Sbjct 51 DTIPLQKVTSTILEKIITWCEHHADDEPKKV 81
> ath:AT3G53060 ASK6; ASK6 (ARABIDOPSIS SKP1-LIKE 6); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=85
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 0/36 (0%)
Query 8 LLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHH 43
+++K M ED + +PLP V+S IL V+EYC H
Sbjct 1 MMIKGMAEDDCADNGIPLPNVTSKILLLVIEYCKKH 36
> ath:AT4G34470 ASK12; ASK12 (ARABIDOPSIS SKP1-LIKE 12); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=152
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 0/42 (0%)
Query 3 VASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHH 44
VA S + M ED D +PL V S IL KV+EYC +H
Sbjct 22 VAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYH 63
> ath:AT3G21850 ASK9; ASK9 (ARABIDOPSIS SKP1-LIKE 9); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=153
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 0/40 (0%)
Query 5 SASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHH 44
+++ M+E+ + +PLP V+ IL V+EYC HH
Sbjct 25 QCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKHH 64
> bbo:BBOV_IV006860 23.m05921; cytosolic glycoprotein FP21; K03094
S-phase kinase-associated protein 1
Length=161
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query 2 EVASASLLVKSMTEDGDD-TDVVP--LPKVSSYILKKVVEYCTHHHDNPPEDIP 52
EV + S+L+ +M + D+ T++ P L + + L K+++YC +H++NP + IP
Sbjct 18 EVLTPSVLLTNMLQGYDEETELAPIELKNIPTRTLGKILDYCKYHYNNPAKPIP 71
> ath:AT2G03160 ASK19; ASK19 (ARABIDOPSIS SKP1-LIKE 19); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=200
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 0/41 (0%)
Query 3 VASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHH 43
VA +V + ED T+ +P+P V+ IL KV+EYC H
Sbjct 22 VARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKH 62
> ath:AT3G60010 ASK13; ASK13 (ARABIDOPSIS SKP1-LIKE 13); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=154
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query 3 VASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHH--HDNPPED 50
VA S + M ED + VP+ V+ IL KV+EYC H D+P E+
Sbjct 21 VAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTEE 70
> sce:YDR328C SKP1, MGO1; Evolutionarily conserved kinetochore
protein that is part of multiple protein complexes, including
the SCF ubiquitin ligase complex, the CBF3 complex that binds
centromeric DNA, and the RAVE complex that regulates assembly
of the V-ATPase; K03094 S-phase kinase-associated protein
1
Length=194
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query 22 VVPLPKVSSYILKKVVEYCTHHHDN--PPED 50
V+P+P V S +L+KV+E+ HH D+ P ED
Sbjct 76 VMPVPNVRSSVLQKVIEWAEHHRDSNFPDED 106
> cel:F47H4.10 skr-5; SKp1 Related (ubiquitin ligase complex component)
family member (skr-5); K03094 S-phase kinase-associated
protein 1
Length=145
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Query 23 VPLPKVSSYILKKVVEYCTHHHDNPPEDIP 52
+PL V+S I KKV+E+C +H EDIP
Sbjct 43 IPLKNVTSEIFKKVIEWCEYH----AEDIP 68
> cel:F46A9.4 skr-2; SKp1 Related (ubiquitin ligase complex component)
family member (skr-2); K03094 S-phase kinase-associated
protein 1
Length=174
Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query 16 DGDDTDVVPLPKVSSYILKKVVEYCTHHHDNPPEDIPT 53
+G + + +P+ V++ ILKKV+ +CT H +P IPT
Sbjct 52 EGTNAEPIPVQNVTASILKKVINWCTKHQSDP---IPT 86
> ath:AT3G21840 ASK7; ASK7 (ARABIDOPSIS SKP1-LIKE 7); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=125
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query 1 REVASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHH---DNPPED 50
E A + M E +V+P+ V+S IL+ V+EYC HH NP D
Sbjct 20 EETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNKHHVDAANPCSD 72
> cel:Y37H2C.2 skr-6; SKp1 Related (ubiquitin ligase complex component)
family member (skr-6); K03094 S-phase kinase-associated
protein 1
Length=106
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 0/23 (0%)
Query 21 DVVPLPKVSSYILKKVVEYCTHH 43
D +PL KV + I +K++EYC H
Sbjct 2 DAIPLTKVDAKIFEKIIEYCEHQ 24
> cel:F54D10.1 skr-15; SKp1 Related (ubiquitin ligase complex
component) family member (skr-15); K03094 S-phase kinase-associated
protein 1
Length=184
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query 15 EDGDDTDVVPLPKVSSYILKKVVEYCTHHHDNP-PEDIPT 53
E+ + +P+ KV+ LK VVE+C HH +P PE P+
Sbjct 56 ENAESMVPIPIEKVNGKTLKLVVEWCEHHKADPVPEAYPS 95
> ath:AT1G10230 ASK18; ASK18 (ARABIDOPSIS SKP1-LIKE 18); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=183
Score = 33.1 bits (74), Expect = 0.25, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 0/45 (0%)
Query 3 VASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHHDNP 47
VA L++ M ED + +PL V+ IL K++EY H + P
Sbjct 47 VARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEP 91
> ath:AT3G21830 ASK8; ASK8 (ARABIDOPSIS SKP1-LIKE 8); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=152
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 0/43 (0%)
Query 2 EVASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHH 44
E A + M E +V+ + K++S IL+ V+EYC HH
Sbjct 21 ETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHH 63
> cel:R12H7.3 skr-19; SKp1 Related (ubiquitin ligase complex component)
family member (skr-19); K03094 S-phase kinase-associated
protein 1
Length=182
Score = 30.4 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 18/24 (75%), Gaps = 0/24 (0%)
Query 27 KVSSYILKKVVEYCTHHHDNPPED 50
++ + +++KV+E+C HH +PP D
Sbjct 56 EIPATVMRKVIEWCDHHKHDPPYD 79
> ath:AT2G03170 ASK14; ASK14 (ARABIDOPSIS SKP1-LIKE 14); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=149
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 0/41 (0%)
Query 3 VASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHH 43
VA +V+ M ED VPL V+ IL VVEYC H
Sbjct 22 VARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKH 62
> ath:AT3G25650 ASK15; ASK15 (ARABIDOPSIS SKP1-LIKE 15); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=177
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 0/41 (0%)
Query 3 VASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHH 43
VA +VK + ED + +PL V+ IL V+EYC H
Sbjct 22 VARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCKKH 62
> cel:C52D10.9 skr-8; SKp1 Related (ubiquitin ligase complex component)
family member (skr-8); K03094 S-phase kinase-associated
protein 1
Length=194
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 0/39 (0%)
Query 6 ASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHH 44
++L+ ED D +P+ V+ ILK V+E+C H
Sbjct 47 SNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKHK 85
> cel:Y105C5B.13 skr-10; SKp1 Related (ubiquitin ligase complex
component) family member (skr-10); K03094 S-phase kinase-associated
protein 1
Length=192
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
Query 6 ASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHH 43
++L+ ED D +P+ V+ ILK V+E+C H
Sbjct 45 SNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKH 82
> cel:Y47D7A.1 skr-7; SKp1 Related (ubiquitin ligase complex component)
family member (skr-7); K03094 S-phase kinase-associated
protein 1
Length=194
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 0/39 (0%)
Query 6 ASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHHH 44
++L+ + D D +P+ V+ I+K V+E+C H
Sbjct 47 SNLISTCVANDVASMDPIPITNVTGNIMKMVIEWCEKHK 85
> ath:AT1G80740 CMT1; CMT1 (CHROMOMETHYLASE 1); DNA binding /
chromatin binding; K00558 DNA (cytosine-5-)-methyltransferase
[EC:2.1.1.37]
Length=791
Score = 27.7 bits (60), Expect = 8.5, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 18/23 (78%), Gaps = 0/23 (0%)
Query 23 VPLPKVSSYILKKVVEYCTHHHD 45
VPLPK++S I ++V+ C +++D
Sbjct 163 VPLPKITSRIEQRVIPPCDYYYD 185
> cel:C52D10.7 skr-9; SKp1 Related (ubiquitin ligase complex component)
family member (skr-9); K03094 S-phase kinase-associated
protein 1
Length=194
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 0/38 (0%)
Query 6 ASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHH 43
++L+ ED D +P+ V ILK V+E+C H
Sbjct 47 SNLISTCAPEDVASMDPIPITNVIGNILKMVIEWCEKH 84
> ath:AT2G03190 ASK16; ASK16 (ARABIDOPSIS SKP1-LIKE 16); protein
binding / ubiquitin-protein ligase; K03094 S-phase kinase-associated
protein 1
Length=170
Score = 27.7 bits (60), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 0/41 (0%)
Query 3 VASASLLVKSMTEDGDDTDVVPLPKVSSYILKKVVEYCTHH 43
VA ++ M +D +PL V+ IL V+EYC H
Sbjct 22 VARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKH 62
Lambda K H
0.311 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2018379896
Database: egene_temp_file_orthology_annotation_similarity_blast_database_865
Posted date: Sep 17, 2011 11:19 AM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40