bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0010_orf2 Length=251 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd2_330 265 9e-70 > 5807.cgd2_330 Length=535 Score = 265 bits (677), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 129/251 (51%), Positives = 176/251 (70%), Gaps = 4/251 (1%) Query 4 LRVLSFHAQPVTQVKWSGGPQGYLFSASRDTTVKVLNPLTGALVKDLKGHAHWVNTLALN 63 + LS H + +T VKW+G Q Y+ S+SRD+ +KV NP TG L++DLKGHAHWVNTLALN Sbjct 286 INTLSSHTEMITHVKWTGINQEYVVSSSRDSLIKVWNPETGQLLRDLKGHAHWVNTLALN 345 Query 64 SDAVLRRGPF--DNRVQQQAFTSFAEMKEAAEKHFNTFIQECDQEALLSGSDDSTLIL-R 120 +D + R + + + F S + AA++ + F + C E LLSGSDD+T+ L Sbjct 346 TDYITRSACYYPTGKNLKLNFKSLQDKIAAAKQSVDNFKKRCKFERLLSGSDDNTMFLWD 405 Query 121 RLKPNGSFEEVGRMTGHQKLINCVCFSPNGLMIASGSFDKSIRLWNGTTGQYMATLRGHV 180 L NG + + R+TGH K++N V FSP+G IAS SFDK+IRLW+G +G+++A LRGHV Sbjct 406 PLGENGR-KPIHRLTGHLKVVNHVAFSPDGRYIASASFDKTIRLWDGHSGKFIAVLRGHV 464 Query 181 GPVYQLAWAADSRLLLSGSGDSTLKVWDAEQQRLKEDLPGHADEVYAIDWAPNGGAAASG 240 GPVY ++W+ DSRL+ S S DST+KVW ++LKEDLPGHADEVY IDW+ +G +SG Sbjct 465 GPVYMISWSVDSRLIASASSDSTVKVWHVSSKKLKEDLPGHADEVYTIDWSIDGSRLSSG 524 Query 241 GKDRMLRIWRH 251 KD +++IWRH Sbjct 525 SKDCIVKIWRH 535 Lambda K H 0.318 0.133 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 76235559246 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40