bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0032_orf2 Length=251 Score E Sequences producing significant alignments: (Bits) Value 9544.ENSMMUP00000032836 136 7e-31 > 9544.ENSMMUP00000032836 Length=1917 Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 80/229 (34%), Positives = 120/229 (52%), Gaps = 10/229 (4%) Query 4 IFGLTLSATGIKSAEDKIAAIRHWPEVLENETQVRQFLGTINYSRMFMGPDYADVARPLV 63 G ++ GI+ E KI AI+ WP Q+R F G + R F+ D++ A PL Sbjct 368 FLGYVVTPKGIEVDETKIEAIKSWPV-----PQLRSFFGLAGFYRRFVK-DFSTFAAPLH 421 Query 64 ALTRKDVSFEWTELHTQAVRQLKQRLIDFTTLQVPDTTKPFELYTDASGYAIGAVLEQDG 123 L +K V F W + ++ LK +L LQ+P+ K FEL DASG IG VL QDG Sbjct 422 ELMKKGVVFHWGKTQGKSFDTLKNKLTHAPLLQLPNFGKTFELECDASGVGIGGVLMQDG 481 Query 124 KPIGFRSQVMNPTQQRCSIYDQELLALVMALDKWSHLLRVSKLMAYTDHQALTHPQQLQA 183 KP+ + S+ ++ S YD+EL ALV +L+ W H L + + +DH++L + L++ Sbjct 482 KPVAYFSEKLHGPVLNYSTYDKELYALVRSLETWRHYLWHKEFVIQSDHESLKY---LRS 538 Query 184 SKPLRGHTARWLDFLAEFPDLHIPDVQGARNQVADALSRLLGLSNTFTC 232 L A+W++F+ FP + I +G N +AD LSR + C Sbjct 539 QNNLNRRHAKWVEFIESFPYV-IKRKKGKDNVIADVLSRRYTFLSQLDC 586 Lambda K H 0.320 0.133 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 76235559246 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40