bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0101_orf3 Length=290 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI1455c 187 4e-46 > 5833.PFI1455c Length=272 Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 97/258 (37%), Positives = 162/258 (62%), Gaps = 10/258 (3%) Query 15 MGQSLTTQEKHNIKREIYTLYPGLEQQLEMAFSCHDIEGTLTLPYATLEPVIRHLLMQYG 74 MGQ ++++E K+ IY YPGLEQQL+M F+CHDI L Y T+E ++RH LMQ G Sbjct 1 MGQ-ISSKEDEIEKQNIYATYPGLEQQLDMVFACHDISKQGKLSYKTVEMILRHFLMQCG 59 Query 75 LIEYVTRFSKESGALDPSHVRHELA-EFGVATTRLFGDANLNVDDFKSLAVVWLKKILDT 133 +EYV RF E+G LD HV + L+ + + + G++ L +D+ K L +++LKKI DT Sbjct 60 FMEYVCRFVDENGTLDLKHVSNYLSIKKLMYKLKCCGESMLTLDEMKELVIIFLKKISDT 119 Query 134 HADDQAEWMEKLRADQEEQSANYAKAMKEFQEQYVKQQAVYQQGLEEQQKQIQDWNRLLE 193 + +DQ +W+E++++ QE+Q +AM ++++ + AV +Q + + K++ +WN +E Sbjct 120 YTEDQTKWLEQMKSSQEQQDKALEEAMYKYEKNILFHHAVKEQQILQNDKKLNEWNENVE 179 Query 194 DAHKTQQQIYDEEVRRMKEIQEREARASEIARQEELELIRKYQQKLEEIA---RSEGGKC 250 +A++ QQ+I +R+ + +++ S + + EL + + Y K++E A + + KC Sbjct 180 NAYEAQQEI----LRQFESSRKKNIDIS-LEKNNELIIAKDYIDKIKEAATDNKYDNSKC 234 Query 251 FVYPASKTPYGACASAGA 268 F+YPAS P GAC SAGA Sbjct 235 FIYPASSAPCGACTSAGA 252 Lambda K H 0.317 0.131 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 97812643747 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40