bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0123_orf2
Length=273
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd4_3160 376 4e-103
> 5807.cgd4_3160
Length=262
Score = 376 bits (966), Expect = 4e-103, Method: Compositional matrix adjust.
Identities = 180/262 (68%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query 14 MAIGKNKRMSKGKKGGKKKIGDPFLKKEWYDLKAPSLFQQRNFGKTLVTKSAGTKLAVDS 73
MAIGKNKR+SKG+KGG+KKI DP +KE+YDL+APS F+ RNFG T+ +K+ GTKLAVD+
Sbjct 1 MAIGKNKRISKGRKGGRKKIIDPLSRKEFYDLRAPSTFKVRNFGTTIASKNQGTKLAVDA 60
Query 74 LRGRVYEVNLADLNLDEDQGFRKIKLQCEEIQGRSCLTDFHGMNITRDKLCSLIRKWHSL 133
LR RVYEV+LADLN DEDQ FRKIKLQCE+IQGR+CLT+FHGM++TRDKLCSLIRK+ +L
Sbjct 61 LRHRVYEVSLADLNNDEDQAFRKIKLQCEDIQGRTCLTEFHGMDMTRDKLCSLIRKYQTL 120
Query 134 IEAFVDVQTVDGYTLRMFCIAFTERRPNQIKSTCYARSSQIRAIRKKMVSIMAAEASKCQ 193
IEA +V+T DGY LR+FCIAFT R +Q+KSTCYA++SQIR IRKKMV I+ AEA
Sbjct 121 IEAHCNVKTSDGYVLRLFCIAFTRRMADQVKSTCYAQTSQIRQIRKKMVEIITAEAEGTT 180
Query 194 LRDLVKKFIPESIGKSIEAACRSIFPLQNVLIRKVKVIKKPKFDLTKLMELH--GETSED 251
LRDLVKKFIPESIGK IE ACR IFPLQ+V IRKVKV+ KP FD+++LME H + E+
Sbjct 181 LRDLVKKFIPESIGKEIEKACRHIFPLQHVFIRKVKVLSKPSFDVSRLMESHVGADGVEE 240
Query 252 VGKKVATESAAAQNTLSAEVKA 273
G KV +ES A N L+AE+KA
Sbjct 241 KGTKVVSESNQATNLLTAEMKA 262
Lambda K H
0.319 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 88576444215
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40