bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0206_orf2 Length=448 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd1_2590 261 3e-68 > 5807.cgd1_2590 Length=256 Score = 261 bits (667), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 118/243 (48%), Positives = 161/243 (66%), Gaps = 16/243 (6%) Query 182 GCAHYRRKCKVVAPCCKEIYWCRHCHNEAYEMDLSNAHEIDRHAVEEIVCAVCEARQPVS 241 GC HY+ +C+++APCC YWCRHCHNE+ E + HE+DR +++E+VC C RQP S Sbjct 3 GCKHYKSRCRIIAPCCNNEYWCRHCHNESQE----DHHEVDRFSIKEVVCRRCNKRQPAS 58 Query 242 NKCVG---CG---------TVFGAYFCSVCKFWDNLGEKKKVYHCDECGICRLGGRENYF 289 N C+ CG T F YFCS C WD+ G +K V+HCDECGICR+GG+E+YF Sbjct 59 NSCINSAECGEKSGKKCDVTQFAKYFCSKCNLWDDNGIEKNVFHCDECGICRVGGQESYF 118 Query 290 HCPTCGSCYPMQLQNKHKCLENAMHRQCPVCLEDMFSSLRQSQVLQCGHTIHSDCLRLLQ 349 HC C CYP+ ++ HKC+EN+ R CP+CLED+F S++ +L CGHTIH DCL LL Sbjct 119 HCKVCCMCYPLSIKETHKCIENSCRRPCPLCLEDLFYSIKTVSILNCGHTIHEDCLLLLG 178 Query 350 KQKGFQAIRCPMCSKSIADYSEFWKQLSEEIERTPMEEQMRRKVRIACNDCLERCTTDFH 409 + KG ++RCP+CSKS+ D S+ W ++ + I +P+ E+ + V I CNDC +C T H Sbjct 179 EAKGLTSLRCPICSKSLGDNSQIWNEIDKMIAESPIPEESKELVNIFCNDCNIKCNTYSH 238 Query 410 FLG 412 G Sbjct 239 PYG 241 Lambda K H 0.316 0.130 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 187075795405 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40