bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0241_orf1
Length=126
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0316 202 2e-51
> 5833.PF13_0316
Length=151
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/126 (75%), Positives = 111/126 (88%), Gaps = 0/126 (0%)
Query 1 LRVKPQEVEDHIVKLARKGQTPSQIGVTLRDQFGIPQVKSVTGSKILRILKKQGIAPEIP 60
L+ KP E+ED I+KLA+KGQTPSQIG TLRD +GIPQVKSVTG+KILRIL+ QGIA IP
Sbjct 26 LKQKPSEIEDAIIKLAKKGQTPSQIGATLRDNYGIPQVKSVTGNKILRILRAQGIATTIP 85
Query 61 EDLYFLIKKAVAVRKHLEKDRKDADSKFRLILVESRIHRLGRYYRRTKQLPATWKYQSST 120
EDLYFLIKKAV++RKHLEK++KD D KFRLIL ES+IHR+ RYY+R K LP+ WKYQSST
Sbjct 86 EDLYFLIKKAVSMRKHLEKNKKDKDCKFRLILTESKIHRISRYYKRKKLLPSNWKYQSST 145
Query 121 ASALVA 126
ASAL+A
Sbjct 146 ASALIA 151
Lambda K H
0.320 0.135 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22588795449
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40