bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0316_orf1 Length=277 Score E Sequences producing significant alignments: (Bits) Value 5478.CAGL0M03795g 156 8e-37 > 5478.CAGL0M03795g Length=513 Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 91/243 (37%), Positives = 138/243 (56%), Gaps = 29/243 (11%) Query 7 KIFVGGLNRNTTAESLREYFSSFGGVYHTEVLFDKLTGRSRGFGFVTFEEPETINNVVDR 66 K+F+GGLN TT + LREYFS +G V +++ D TGRSRGFGF++F+ P +++ VV Sbjct 131 KMFIGGLNWETTEDGLREYFSKYGNVVELKIMKDPNTGRSRGFGFLSFDAPSSVDEVVKT 190 Query 67 HHTIDESQVEVRRAIPREEARQTQPRRDRDPAENSGRVFIGGLGDDVTDEVLKDFFSRFG 126 H +D ++ +RAIPREE +T G++F+GGLG DV + +++FS++G Sbjct 191 QHILDGKVIDPKRAIPREEQDKT------------GKIFVGGLGTDVRPKEFEEYFSQWG 238 Query 127 ELTSANVMVDRETNRPRGFGFIIYKNPEDAEKAL-GIHKDL-GPNAEAKRAQPRTQGPRM 184 + A +M+D++T R RGFGF+ Y +P+ AEK +++ G E KRA+PR Q + Sbjct 239 TIIDAQLMLDKDTGRSRGFGFVTYDSPDAAEKVCESRYREFKGKQIEIKRAEPRHQQKQA 298 Query 185 RMLAMGGP---MGM-PSPYRMEDPRYAVARTGYGGAGGAPAQLYGGYNYAYHPY-YAAYY 239 A+ P MGM P M +P AG + GG+N ++P YY Sbjct 299 GQQAVSPPVAGMGMNPMSNPMANPM----------AGMYQNPMMGGFNPMFNPQAMQDYY 348 Query 240 AQM 242 +M Sbjct 349 QKM 351 Lambda K H 0.316 0.137 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 90986687595 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40