bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0318_orf8 Length=211 Score E Sequences producing significant alignments: (Bits) Value 3702.AT2G21130.1 268 8e-71 > 3702.AT2G21130.1 Length=174 Score = 268 bits (685), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 125/170 (73%), Positives = 144/170 (84%), Gaps = 0/170 (0%) Query 42 NPRVFFDVSIGGGAARRIVMELFADVTPKTAENFRCLCTGEKGVGRSGKPLHYKGSSFHR 101 +P+VFFD++IGG A +IVMEL+ D TPKTAENFR LCTGEKGVGRSGKPLH+KGSSFHR Sbjct 4 HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHR 63 Query 102 IIPEFMLQGGDFTRGNGTGGESIYGEKFADENFNLRHDRPFLLSMANAGPNTNGSQFFIT 161 +IP FM QGGDFT+GNGTGGESIYG KF DENF +H P +LSMANAG NTNGSQFFI Sbjct 64 VIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFIC 123 Query 162 TVVCDWLNGKHCVFGQVTEGQDVVKAIEQVGTTSGKPKQQVTIVDCGQLS 211 TV DWL+GKH VFGQV EG DVVKAIE++G++SGKP + V I DCG++S Sbjct 124 TVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173 Lambda K H 0.320 0.136 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 53680939224 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40