bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0336_orf2
Length=83
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0314 137 7e-32
> 5833.PF11_0314
Length=439
Score = 137 bits (346), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 75/83 (90%), Gaps = 1/83 (1%)
Query 1 NEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 60
NE++R RILQIH+RKM V+K DVNF ELARSTDDFNGAQLKAVCVEAGMIALRR A+E+
Sbjct 358 NEESRARILQIHSRKMNVHK-DVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEID 416
Query 61 HEDFVQGIAAVQAKKKSSLNYFT 83
HEDFV+GI +V +KKKS+LNYFT
Sbjct 417 HEDFVEGITSVLSKKKSTLNYFT 439
Lambda K H
0.318 0.129 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22659344793
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40