bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0358_orf2 Length=186 Score E Sequences producing significant alignments: (Bits) Value 5518.FG06558.1 64.3 2e-09 > 5518.FG06558.1 Length=331 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 0/99 (0%) Query 2 SSTEPPWTLGQYVTRLQHLASATEHEMLMALLLLTHLQQRQQQLRISQKNAHRLLLAALV 61 S EPP T+ QY+ RL + L L + L ++ + ++++NAHRL+LA L Sbjct 185 SKNEPPITINQYLQRLHQFCPMSTAVYLATSLYIHRLAVEERAIPVTRRNAHRLVLAGLR 244 Query 62 LVSKVVRDDHTPLAMWAVVGGVPPRELAALELALLELVG 100 + K + D P A A VGGV ELA LE++ LVG Sbjct 245 VAMKALEDLSYPHAKMAKVGGVSEAELARLEISFCFLVG 283 Lambda K H 0.319 0.130 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 40752393066 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40