bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0374_orf3 Length=264 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI0935w 156 6e-37 > 5833.PFI0935w Length=370 Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 67/156 (42%), Positives = 104/156 (66%), Gaps = 0/156 (0%) Query 1 GTRQVGEQDERISITAVCLSLAVHLLCFCIGFILSFPKHVSFARQIFLVYSVAAFCVEIQ 60 G + GE D+ + +CLSL H + F IG+ LS+PK + F+RQIFLVY++A+FC E+Q Sbjct 117 GDYKNGEIDDNTATLLICLSLVQHTMFFIIGYFLSYPKKLEFSRQIFLVYNIASFCFELQ 176 Query 61 QRFVEDDDSLNFLPFISSLLPFEKIMFFRALFPFIFVASACTAAWQFADIPARHWAVLRA 120 RF+EDD + ++LP + LLP+EKI F R FP +F S C +A+ + D A ++R+ Sbjct 177 FRFIEDDTTFDWLPALGYLLPYEKIKFLRTFFPIVFFISICASAYSYTDKNATLIFLMRS 236 Query 121 LLSTNRVLTERTQELVRATSYLKSMGTPSVAALKAM 156 +LSTNR++ ER+ +++ +T+YLK G V L+ + Sbjct 237 ILSTNRIIVERSNDVIESTNYLKKNGEKLVTKLQQI 272 Lambda K H 0.325 0.135 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 83153396610 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40