bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0389_orf1 Length=302 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_4350 251 2e-65 > 5807.cgd7_4350 Length=1660 Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 134/305 (43%), Positives = 188/305 (61%), Gaps = 4/305 (1%) Query 1 NKSGCYEVETVNDLQEFAD-VRKQLDLIFSKEEQLAYFKAL-SAVLLCGNIKFNNVQAMG 58 N S CY+V+ ++D++EF + V QL+ I +E + +L SA+LL GN + ++ G Sbjct 309 NVSNCYDVQNIDDIKEFKNCVFPQLERILPNQEAIDQLISLFSAILLMGNFELGEHESRG 368 Query 59 TDKAAKLQNEGDFDKIASLFGAKKNTLVEALTINTVEVRGNIIKSPLSAEQALVMCRSMA 118 + AA ++++G ++ L+G E L +++E+RGN++ S L+ +A S Sbjct 369 IEDAACIESQGILSDVSELWGIDSKQFEELLLTSSIEIRGNVVVSALNKAKAQEQIESCG 428 Query 119 KEVYSVLFDFIVESFNSKISFDHENKVWIGILDIYGFEFFEKNSYEQFLINYANERLQQF 178 KEVY F+++++ N I FD + WIGILDIYGFE F+ N +EQFLIN+ANE+LQQF Sbjct 429 KEVYLKCFEYLIDLVNKAIEFDDNKRQWIGILDIYGFEVFKVNGFEQFLINFANEKLQQF 488 Query 179 FIQQVFQAEKAEYEAEGIDHSMIVYSDNASVLEVFDKPKAGIFAFLEEQCLLQTGTSESF 238 FI VFQAE EYE E I H I Y DN+S++++FD K GIF LEE CL+ GT ESF Sbjct 489 FISSVFQAELQEYEKESISHDNITYEDNSSLVQLFD-GKGGIFDLLEESCLVSNGTYESF 547 Query 239 TAACHKNI-KNPNYETPKGDARLTFRVLHTAAPVLYTTTEFVPXNKMRLPKRVIAAFKEA 297 T + HKN K Y+ PKG+ F + HTA V YTT EFV NK R+ +I FKE+ Sbjct 548 TNSAHKNCGKKSGYKLPKGNVPDKFIIEHTATTVEYTTREFVLKNKHRIRPEIIKLFKES 607 Query 298 SNLAI 302 N I Sbjct 608 KNSII 612 Lambda K H 0.319 0.134 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 105013574575 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40