bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0432_orf2 Length=202 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0493 123 3e-27 > 5833.PF14_0493 Length=895 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 43/201 (21%) Query 2 AYRKVPGDVCEGGWVPEKVAVPCPPHSPVSRGGKLVLLLISLIVLLMCILNYLAKTGRLK 61 AYRKVPGD+C GWVPEKV VPCP ++P ++ K +L +I ++ ++M I+ Y+ + + K Sbjct 738 AYRKVPGDICVNGWVPEKVPVPCPSYAPFNKTAKSILFIIFIMGIVMLIITYICRNPKFK 797 Query 62 AFFRNTGFETFANVSYAIVGSGPSGWGDGDDVQKNHHNGEEMGGRVRGTSKYEPELSFID 121 F N GF+TF NV Y+++ + + N +N + +EPE+ FID Sbjct 798 NLFYNYGFDTFENVKYSVIKTK----------RGNVNN-----------NVFEPEMEFID 836 Query 122 AEQDETEDDAPSLVNYSQGGGHTASRLEASQRPSGADDFELGDNASAVSNRNRPSSHQGE 181 AEQD+ E+D P+L+ YS + ++ DF L RNR + + Sbjct 837 AEQDDNEEDVPTLLPYSSDRNRSTNK-----------DFTLA--------RNRTNQNNNI 877 Query 182 TSVTIPRLAPAAYNEDSMELL 202 TS I +P+ D++ELL Sbjct 878 TSRNI---SPSKNYADNIELL 895 Lambda K H 0.313 0.133 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 48999515920 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40