bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0450_orf2 Length=346 Score E Sequences producing significant alignments: (Bits) Value 7227.CG13648-PA 66.2 2e-09 > 7227.CG13648-PA Length=2768 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/124 (37%), Positives = 76/124 (61%), Gaps = 4/124 (3%) Query 159 GATAAPDDDKELGATAAPDDDKELGATAAPDDDKELGATAAPDDDKELGATAAPDDDKEL 218 A+ + +D+ + T +P D ++ + AP D + ++ AP D E+ ATA P DD ++ Sbjct 2197 AASTSTEDEDQAPVTVSPQDAEKTPVSPAPQDSDKTPSSEAPQDADEIPATATPLDDNKI 2256 Query 219 GATAAPDDDKELGATAAPDDDKELGATAAPDDDKELGATAAPDDDKTIKPAPAQPIAPLW 278 AT AP D + ATAAP D+ ++ TAAP D++++ +TAAP DD+ I PA P++P+ Sbjct 2257 PATVAPQTDDGVPATAAPLDEDKIQTTAAPLDEEKIPSTAAPLDDEKI-PA---PVSPVV 2312 Query 279 FEKE 282 F+ E Sbjct 2313 FDVE 2316 Lambda K H 0.312 0.130 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129139090689 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40