bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0463_orf5 Length=512 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0084 843 0.0 > 5833.PF10_0084 Length=445 Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/430 (95%), Positives = 422/430 (98%), Gaps = 0/430 (0%) Query 64 MREIVHVQGGQCGNQIGAKFWEVISDEHGIAPTGTYKGDSDLQLERISVFYNEATGGRYV 123 MREIVH+Q GQCGNQIGAKFWEVISDEHGI P+GTY GDSDLQLER+ VFYNEATGGRYV Sbjct 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGTYCGDSDLQLERVDVFYNEATGGRYV 60 Query 124 PSAVLMDLEPGTMDSVRSGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVV 183 P A+LMDLEPGTMDSVR+GPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELID+VLDVV Sbjct 61 PRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDAVLDVV 120 Query 184 RKEAEGCDCLQGFQVTHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVFPSPKVSDTVV 243 RKEAEGCDCLQGFQ+THSLGGGTGSGMGTLLISK+REEYPDRIMETFSVFPSPKVSDTVV Sbjct 121 RKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMETFSVFPSPKVSDTVV 180 Query 244 EPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSL 303 EPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSL Sbjct 181 EPYNATLSVHQLVENADEVQVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCSL 240 Query 304 RFPGQLNSDLRKLAVNLVPFPRLHFFLIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 363 RFPGQLNSDLRKLAVNL+PFPRLHFF+IGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM Sbjct 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300 Query 364 CASDPRHGRYLTACALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNMKSGVCDIPPKG 423 CASDPRHGRYLTACA+FRGRMSTKEVDEQMLNVQNKNSSYFVEWIP+N KS VCDIPPKG Sbjct 301 CASDPRHGRYLTACAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPHNTKSSVCDIPPKG 360 Query 424 LKMSVTFVGNSTAIQEMFKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNTNDLVS 483 LKM+VTFVGNSTAIQEMFKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN NDLVS Sbjct 361 LKMAVTFVGNSTAIQEMFKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420 Query 484 EYQQYQDATA 493 EYQQYQDATA Sbjct 421 EYQQYQDATA 430 Lambda K H 0.320 0.136 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 221782429027 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40