bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0471_orf3 Length=122 Score E Sequences producing significant alignments: (Bits) Value 3702.AT5G10260.1 164 7e-40 > 3702.AT5G10260.1 Length=207 Score = 164 bits (415), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 75/122 (61%), Positives = 92/122 (75%), Gaps = 0/122 (0%) Query 1 VVVYDITNRASFINTTKWIEDVRAERGKDVVIALVGNKTDLSDRRQVSPEEGEQKAREQG 60 V+VYD+ NR SF+NT+KWIEDVR ERG DV+I LVGNKTDL D+RQVS EEG+ KAR+ G Sbjct 86 VIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDNKARDYG 145 Query 61 ILFIETSAKAGHNVKTLFRKLAAALPGLETQQSASDAQMVDVQLNATPQQQDLSRKASGC 120 ++FIETSAKAG N+K LFRK+AAALPG+ET S MVDV L + ++ GC Sbjct 146 VIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEDMVDVNLKTSSNSAQGEQQRGGC 205 Query 121 SC 122 +C Sbjct 206 AC 207 Lambda K H 0.313 0.127 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22916587881 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40