bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0473_orf3 Length=500 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0699 202 2e-50 > 5833.PF14_0699 Length=592 Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 107/323 (33%), Positives = 172/323 (53%), Gaps = 44/323 (13%) Query 7 RTYPERQIFNRDLTRRSLQRVLFAWAKSNTDVSYKQGMNEVLAVLYLACAREAI-PSSPL 65 RTY E++IF + R L +LF WAK N D+SYKQGMNE+LA+ ++ RE + ++ Sbjct 165 RTYSEKKIFQNEEIREILNTILFIWAKKNPDISYKQGMNEILAIFFIVNYREHLHNNNNY 224 Query 66 GDTDSA-----FSVIFSADPAHIEADAFRLFDGLMTGCCLRSMYLPPQKEPAPAEVKDSL 120 + + FS +F D IEAD + +FD M L+ ++ + E K+S Sbjct 225 YEYEKELFFKEFSNLF--DKEFIEADTYIIFDHFM-NMGLKYLF------TSMEEKKNST 275 Query 121 LGPLGGGPPMHSRATGQSAVLLRCSRVFNSLLAKADPAVYLHLEGLGVEPQLFLLRWLRL 180 ++ T ++ +L +C+ +F+ LL +D +Y HL L +EPQ+FLLRW+RL Sbjct 276 -----------NKNTCKTVLLHKCTYIFHKLLKNSDKLLYNHLISLSIEPQIFLLRWIRL 324 Query 181 LFSREFHVEDTLLIWDALFSDSWLSTKQQATPASSPVAAPPAVAAKSTVPARTPQ-EFAT 239 + REF ++DT+++WD F+DS+L + V + E A Sbjct 325 FYCREFPIDDTVILWDNFFADSYLKN----------------CNEQFNVDFKGDNIEIAH 368 Query 240 AASERLPLVDYFAVAMLKFIRQHLLESDLSSCLRRLLKFPPIESVQCIVALSLAVR-RGG 298 P+VDYFA++M+ FIR LLESD + CL+RL K+PP+E+++ ++ LS ++ R Sbjct 369 MICRIFPMVDYFAISMILFIRSFLLESDENHCLKRLFKYPPVENIKILIDLSFKIKHRNE 428 Query 299 TPTSAVAAGDPRSSSSSNSSRKS 321 +P ++N S+K Sbjct 429 KKEKHTKKEEPHIIHNNNLSKKE 451 Lambda K H 0.317 0.131 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 216259317552 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40