bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0514_orf3 Length=194 Score E Sequences producing significant alignments: (Bits) Value 5478.CAGL0E06666g 98.6 9e-20 > 5478.CAGL0E06666g Length=1420 Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 78/226 (34%), Positives = 128/226 (56%), Gaps = 32/226 (14%) Query 1 VEDASVEDASVEDASVE------DASVEDASVEEASVEEASVDEAS--VDEASVDEASVD 52 V +SV +SV +SV D S D S +SV +SV+ +S VD + D +SV+ Sbjct 469 VNPSSVNPSSVNPSSVNPSSKPADPSPADPSHNPSSVNPSSVNPSSKPVDPSPADPSSVN 528 Query 53 EASVDEASVDEASVDEASVDEAS--VDE----ASVDEASVDEASVDEASVEEASVEE--- 103 +SV+ +SV+ +SV+ +SV+ +S VD S + +SV+ +SV+ +SV +SV Sbjct 529 PSSVNPSSVNPSSVNPSSVNPSSKPVDPSPADPSHNPSSVNPSSVNPSSVNPSSVNPSSK 588 Query 104 --------ASVDEASVDEASVDEASVE-DPSVEDTSVEDASVEDASVEDASVE------D 148 S + +SV+ +SV+ +S DPS D S +SV +SV +SV D Sbjct 589 PADPSPADPSHNPSSVNPSSVNPSSKPVDPSPADPSHNPSSVNPSSVNPSSVNPSSKPAD 648 Query 149 PSVEDPSVDEASVDEASVDEASVDEASVDEASVDEASVDEASVDEA 194 PS DPS + +SV+ +SV+ +SV+ +SV +SV+ +SV+ +SV+ + Sbjct 649 PSPADPSHNPSSVNPSSVNPSSVNPSSVIPSSVNPSSVNPSSVNPS 694 Lambda K H 0.284 0.106 0.240 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 44893337425 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40