bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0554_orf1 Length=230 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_1680 298 1e-79 > 5807.cgd7_1680 Length=215 Score = 298 bits (763), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 142/205 (69%), Positives = 173/205 (84%), Gaps = 3/205 (1%) Query 27 KKKSLLKVIILGDSSVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTIQIWD 86 +K+ LLKVIILGDS VGKTSLMNQYVN KFS QYKATIGADFLTKD+VID+K VT+QIWD Sbjct 10 RKRVLLKVIILGDSGVGKTSLMNQYVNSKFSTQYKATIGADFLTKDIVIDNKLVTLQIWD 69 Query 87 TAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFDSLESWKDEFLIQSSPADPDAFPFVVL 146 TAGQERFQSLGVAFYRGADCC LV+D+TNPKSF+ L++W++EFLIQ++P DP++FPFVVL Sbjct 70 TAGQERFQSLGVAFYRGADCCALVYDMTNPKSFEGLDAWREEFLIQATPKDPNSFPFVVL 129 Query 147 GNKVD-EKEKRRVSAAKAEAFCGSK-ISYFETSAKQAINVSAAFEEIARKAMQHETKQEQ 204 GNK+D +++ R+VS+ KA A+C SK I YFETSAK A NV AAFEEI R+A+ ET ++Q Sbjct 130 GNKLDLDQKSRKVSSQKASAWCKSKNIEYFETSAKNATNVDAAFEEIGRRALYRETSEDQ 189 Query 205 IYLPETLTLSNQEIRPQHVQTSGGC 229 +Y+PE LTL+N + H GGC Sbjct 190 VYIPEPLTLNNNN-QQHHEIGFGGC 213 Lambda K H 0.318 0.133 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 64397904082 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40