bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0576_orf3
Length=268
Score E
Sequences producing significant alignments: (Bits) Value
197221.tll0790 164 3e-39
> 197221.tll0790
Length=375
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 135/257 (52%), Gaps = 8/257 (3%)
Query 8 FAAAAAAGRRHTQGSQQGLDVEAHVTLSFVDAALNGACSLPVIVRRQETCTACAG----P 63
F R QG +G D+ + L F +A G + + ETC C G P
Sbjct 100 FFGGFTTSSRRQQGPTRGEDLRYDLKLEFREAVFGGEKE--IRINHLETCKTCQGTGAKP 157
Query 64 STRRTSPCPVCEGQGMQTETRRSSFGFVTTSVTCSACNATGISQGPLCKSCEGEGLISKD 123
TR + C C G G + R+ FG T TC C +G+ C+SC G+G I
Sbjct 158 GTRPVT-CSTCGGVGQVRRSARTPFGSFTQLTTCPTCGGSGVVIEDRCESCGGQGHIQVS 216
Query 124 VHLKVNIPAGVLEGSLLRVEGEGSEGRNGEARGDLYISIGVESHDRLTREGADVCSEESI 183
LK+ IPAGV G+ LRV GEG G G GDLY+ + V+ REG ++ S I
Sbjct 217 KKLKITIPAGVDNGTRLRVSGEGDAGLRGGPPGDLYVYLFVQPDPEFQREGNNILSRIKI 276
Query 184 SLEDAVYGCSITVHTVDGDVELKIPALSRSGRKFLIKGRGAKKIDDPSGARGDHVVTLRV 243
S A+ GC I+V TVDG+ ELKIPA ++ G +++GRG ++ +P ARGDH++T+ V
Sbjct 277 SYLQAILGCRISVSTVDGEAELKIPAGTQPGTVLVLEGRGVPRVGNPV-ARGDHLITVDV 335
Query 244 ALPETATAKDRELLKSL 260
+P T ++RELL+ L
Sbjct 336 EIPTHITHEERELLEKL 352
Lambda K H
0.314 0.131 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 85563639990
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40