bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0601_orf1 Length=174 Score E Sequences producing significant alignments: (Bits) Value 31033.SINFRUP00000127860 129 3e-29 > 31033.SINFRUP00000127860 Length=637 Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 69/126 (54%), Positives = 85/126 (67%), Gaps = 8/126 (6%) Query 44 SQPVPTVNDGAVKVVVGDTFKSQVLDAGKDVLLLVYAPWCGHCKKLEPIYEEFGKLAAES 103 SQPVP N G VKVVVG TF V+D KDVL+ YAPWCGHCKKLEP Y LA Sbjct 509 SQPVPKNNKGPVKVVVGKTFDEIVMDTQKDVLIEFYAPWCGHCKKLEPDY-----LALAK 563 Query 104 KTASE-SLVVAKMDGAANRLPDEKYKVTGFPTVWFFKKGS-DTPIKFM-GERTTKGLASF 160 K E +LV+AKMD AN +P++ YKV GFPT++F S TPIKF G+RT +G +SF Sbjct 564 KYKGEKNLVIAKMDATANDVPNDGYKVEGFPTIYFATSNSKQTPIKFEGGDRTLEGFSSF 623 Query 161 VQQQAS 166 +++ A+ Sbjct 624 LEKHAT 629 Lambda K H 0.314 0.130 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 34096907735 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40