bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0608_orf2 Length=259 Score E Sequences producing significant alignments: (Bits) Value 62928.azo3905 65.5 2e-09 > 62928.azo3905 Length=385 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 13/146 (8%) Query 6 EVLIAFRGTKTQVEWILNGQAEHAFNWLGDGEGRTAAGFSHIFSAAWPALQVYLASVDKP 65 EVLIA RGT ++W+ N LG G AGF + W + Q + + Sbjct 76 EVLIATRGTAQSLDWLSNLNIGMQ---LGPGGHLVHAGFHEV----WKSFQRDIFDFLRG 128 Query 66 EAPLSRILVTGYSLGGAVAALMAYGIALNYPTKVDAVIFGAPRTGDSAFMAAWAKRVNGR 125 P SRI G+SLGGA+A L A ++ +V FGAPR+GD + + +KR+ Sbjct 129 RNP-SRIHCVGHSLGGALAMLNADALSAQKVGEVSLYTFGAPRSGDVFYSRSMSKRLGAD 187 Query 126 N---VAFTYDPIPRTPCTEMPACDKP 148 N V+ + DP+P P P C P Sbjct 188 NIHRVSASSDPVPMIPL--FPFCHMP 211 Lambda K H 0.320 0.136 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 81075912214 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40