bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0608_orf2
Length=259
Score E
Sequences producing significant alignments: (Bits) Value
62928.azo3905 65.5 2e-09
> 62928.azo3905
Length=385
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query 6 EVLIAFRGTKTQVEWILNGQAEHAFNWLGDGEGRTAAGFSHIFSAAWPALQVYLASVDKP 65
EVLIA RGT ++W+ N LG G AGF + W + Q + +
Sbjct 76 EVLIATRGTAQSLDWLSNLNIGMQ---LGPGGHLVHAGFHEV----WKSFQRDIFDFLRG 128
Query 66 EAPLSRILVTGYSLGGAVAALMAYGIALNYPTKVDAVIFGAPRTGDSAFMAAWAKRVNGR 125
P SRI G+SLGGA+A L A ++ +V FGAPR+GD + + +KR+
Sbjct 129 RNP-SRIHCVGHSLGGALAMLNADALSAQKVGEVSLYTFGAPRSGDVFYSRSMSKRLGAD 187
Query 126 N---VAFTYDPIPRTPCTEMPACDKP 148
N V+ + DP+P P P C P
Sbjct 188 NIHRVSASSDPVPMIPL--FPFCHMP 211
Lambda K H
0.320 0.136 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 81075912214
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40