bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0652_orf1 Length=276 Score E Sequences producing significant alignments: (Bits) Value 5833.PFD0720w 311 2e-83 > 5833.PFD0720w Length=344 Score = 311 bits (797), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 167/346 (48%), Positives = 216/346 (62%), Gaps = 76/346 (21%) Query 5 MGNQCCAGRDTAYKRKAQENEYGGK--LKNMLTFGTVGDDVVRFDRAYDNSDIAEFVRLC 62 MGN CCAGRD YK K QE G ++ +L+F + +D++RFD+AYD +D+ EFV LC Sbjct 1 MGNNCCAGRDLLYKNKLQEFGIEGSKTIRKLLSFTS--NDILRFDKAYDENDVQEFVNLC 58 Query 63 DSTCEI--------------------------EKLEERMHPWAADPETIGALAATQLAIF 96 STCE+ EKLE+RMHPWAADP+TIGAL+ATQLAI Sbjct 59 SSTCEVAKKKKKKKKIHIYIYIYIYVYIYIYIEKLEDRMHPWAADPKTIGALSATQLAIL 118 Query 97 ASREQ------------------------EPHLKDEIREAGGIEVLVKLLASKELDRKHS 132 AS+E EPH KD IREA GI V + LL S ELDR H+ Sbjct 119 ASKESKMENRKNKKIIFFFLNTKIYIYIYEPHYKDAIREANGIAVFINLLKSHELDRVHA 178 Query 133 AVVALSFLSVDNR-------------------ENCIAMFNAGAIPYLIQGMKSDIEGMRA 173 AVVALSFLSVD++ +NCI MF +GA+PYLI GMKS+I+GM+A Sbjct 179 AVVALSFLSVDSKKTKIHNKKKIYMHIFFEDVKNCICMFESGALPYLISGMKSNIDGMKA 238 Query 174 ACAQTARNIYVLDDKYRRAFMKGGGIAQLVRFLDVSP---DATNVYTQLEAIYHLEDLIG 230 ACAQT RNI+VLD KY++ F+K GGI QLV L++ D+ +YTQLEAIYHLED I Sbjct 239 ACAQTCRNIFVLDKKYKKEFLKLGGITQLVNLLELPSNYDDSQPLYTQLEAIYHLEDFIL 298 Query 231 DENEERPEFVQGVKAAGAIPKLKKLQQHRDKDIADAASLLLVRLAD 276 ++ +E PEF++ VK + +I LK LQQ ++D+A+A+++LL+RL D Sbjct 299 NDGDEIPEFLEAVKNSNSIKNLKTLQQCPEQDLAEASNVLLLRLTD 344 Lambda K H 0.319 0.135 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 90384126750 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40