bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0727_orf2 Length=168 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE1415w 163 2e-39 > 5833.PFE1415w Length=406 Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 75/148 (50%), Positives = 102/148 (68%), Gaps = 1/148 (0%) Query 9 CILRMDHHCPWLANCVGWGNHKYFMLLLLYGTLTCLFVGGTMIESLVRVVGEPKTDFGEL 68 CIL+MDHHCPW+ NCVG+ NHKYFML L+Y ++T +FV TM S+ + +T F E+ Sbjct 238 CILKMDHHCPWIYNCVGYNNHKYFMLSLIYCSITTVFVSITMFTSVRNAIKNGETPFNEM 297 Query 69 FALLLGSILDLFLFAVLFLFGLFHLYLLAKGMTTIEFCEKRLRRTDAQPPADIWNLGFWR 128 F LL G L+ FL ++ F FH++LL MTTIEFCEK+ + Q + +N GF++ Sbjct 298 FLLLFGETLNSFLSLIVTCFLFFHIWLLINAMTTIEFCEKQTNYQN-QSYSKYYNKGFYK 356 Query 129 NFNEVFGYNPLLWFLPIDNRRSDGKHFL 156 NF +VFG +P LWFLPIDNR+ DG +F+ Sbjct 357 NFKDVFGESPFLWFLPIDNRKGDGIYFM 384 Lambda K H 0.332 0.147 0.508 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 30377245073 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40