bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0743_orf1 Length=122 Score E Sequences producing significant alignments: (Bits) Value 7165.AGAP009835-PA 147 1e-34 > 7165.AGAP009835-PA Length=1877 Score = 147 bits (370), Expect = 1e-34, Method: Composition-based stats. Identities = 71/107 (66%), Positives = 86/107 (80%), Gaps = 0/107 (0%) Query 9 VEEGGRNFSLGQRQLICLARALLRRSKILLLDEATAVVDPKTDSLIQQTIKTDFKDCTVI 68 V EGG N S+GQRQLICLARALLR++K+L+LDEATA VD +TD LIQ+TI+T+FKDCTV+ Sbjct 1768 VTEGGENLSVGQRQLICLARALLRKTKVLILDEATAAVDLETDDLIQRTIRTEFKDCTVL 1827 Query 69 TIAHRIETIVDYDKVMVLADGQIEEFDSPRKLFQKKESAFRSLCIQA 115 TIAHR+ TI+D DKV+VL GQI EF P +L Q K SAF S+ A Sbjct 1828 TIAHRLNTIMDSDKVIVLDKGQIVEFAPPAELLQSKNSAFYSMAKDA 1874 Lambda K H 0.323 0.140 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22916587881 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40