bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0751_orf1 Length=249 Score E Sequences producing significant alignments: (Bits) Value 5833.PFF0940c 462 3e-129 > 5833.PFF0940c Length=806 Score = 462 bits (1190), Expect = 3e-129, Method: Compositional matrix adjust. Identities = 219/246 (89%), Positives = 234/246 (95%), Gaps = 0/246 (0%) Query 4 SSTHGFVGADLAQLCTEAALSCIREKMDLIDLEDDTIDAQVLNSMAVTQEHFSSALQSCN 63 S+THGFVGADLAQLCTEAAL+CIREKMD+IDLED+ ID +VL SM VTQ+HF+ AL +CN Sbjct 382 SNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEIIDKEVLESMCVTQDHFNMALGTCN 441 Query 64 PSSLRETVVEVPNVKWDDIGGLEEVKRNLQEMILYPIDHPEKFEKFGMIPSRGVLFYGPP 123 PSSLRETVVEVPNVKWDDIGGL+EVK L+EMILYPIDHP+KFEKFGM PSRGVLFYGPP Sbjct 442 PSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPP 501 Query 124 GCGKTLLAKAVASECSANFISIKGPELLTMWFGESEANVREVFDKARAASPCVLFFDELD 183 GCGKTLLAKAVASECSANF+SIKGPELLTMWFGESEANVREVFDKARAA+PCVLFFDELD Sbjct 502 GCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELD 561 Query 184 SIGTQRGNSLGDAGGAGDRVMNQLLTEIDGVGPMKNLFFVGATNRPELLDEALLRPGRLD 243 SIGTQRG+SLGD GAGDRVMNQLLTEIDGVGP KNLFF+GATNRPELLDEALLRPGRLD Sbjct 562 SIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLD 621 Query 244 QLIYIP 249 QLIYIP Sbjct 622 QLIYIP 627 Lambda K H 0.319 0.137 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 75025471004 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40