bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0810_orf1
Length=289
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT1G35670.1 175 1e-42
> 3702.AT1G35670.1
Length=495
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 159/286 (55%), Gaps = 8/286 (2%)
Query 4 GRGHYMAPEMIRGQYDEKCDIFAVGIIMFQLLSGYHPFFIPGVDNEHTAENKILQDDPCL 63
G +Y+APE+++ Y + D+++ G+I++ LLSG PF+ + E +ILQ
Sbjct 189 GSPYYVAPEVLKKCYGPEIDVWSAGVILYILLSGVPPFW---AETESGIFRQILQGKLDF 245
Query 64 NGDVWQCVSMQGKDLLKKLIQKNPRKRSSAQAALEHPWFTLVTTRCACISQLTPSVFEGL 123
D W +S KDL+ K+++++P+KR SA AL HPW +V + A L P+V L
Sbjct 246 KSDPWPTISEAAKDLIYKMLERSPKKRISAHEALCHPW--IVDEQAAPDKPLDPAVLSRL 303
Query 124 RSWQSQNRLKQAVLQLLAKELNETDIIQLRKTFEAFDRNGRGTISVDELKQSMHDAGYTV 183
+ + N++K+ L+++A+ L+E +I L++ F+ D + GTI+ +ELK + G +
Sbjct 304 KQFSQMNKIKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSEL 363
Query 184 IESELGQIFKSIDASQQGHIGYNEFISTLLARRVVVREEQLREIFDKFDKKGEGRLTLET 243
+ESE+ + + D G I Y EF++ L + REE L F FDK G G +T++
Sbjct 364 MESEIKSLMDAADIDNSGTIDYGEFLAATLHMNKMEREENLVAAFSYFDKDGSGYITIDE 423
Query 244 LRGILKCSNYGVLKDEELQMIFAEIDKNCDGYVDFYEFCDLMTAAD 289
L+ C+ +G L D L + EID + DG +DF EF +M D
Sbjct 424 LQS--ACTEFG-LCDTPLDDMIKEIDLDNDGKIDFSEFTAMMRKGD 466
Lambda K H
0.322 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 97212566178
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40