bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0818_orf3 Length=217 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE0900w 113 3e-24 > 5833.PFE0900w Length=268 Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 88/157 (56%), Gaps = 12/157 (7%) Query 68 FRQTLEQ-PTIN-SKEEAR-----AKNFWVSENTP----DEPEAKLKEPQKGFCCPITGA 116 F Q LE T+N KEE + + NFW+S NT D + KLK P K CPIT Sbjct 109 FVQDLENLNTVNVQKEEEKNLLDISNNFWLSCNTSKVKKDTIQKKLKPPSKNLICPITKK 168 Query 117 PLRIKQLITVKPVLASKEDTENTRWLCALSGREISHQKAAVVKSTGQVILLEYLEKLVFG 176 PL++ +LIT+ P + D+EN W+C+ S + I H KA ++K TG++IL + E ++G Sbjct 169 PLKMNELITINPEVIKNGDSENGGWVCSFSKKNIDHHKAVLLKKTGKIILKSFFENFIYG 228 Query 177 KKGALTSGVIDRKDTVALIPGGTGFSAHNNVEVAVAR 213 KK + V D + L GGT F +H+NVE + R Sbjct 229 KKNSYDITV-GEDDFINLEAGGTAFCSHSNVEKTLYR 264 Lambda K H 0.310 0.124 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 57341003262 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40