bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0819_orf1
Length=326
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT2G25870.1 124 3e-27
> 3702.AT2G25870.1
Length=584
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 31/280 (11%)
Query 47 ILTDFDYTFLDSDHNASEANAAAFGKTAAAGIITAIASGRSRDGTLSCLSET----CKGL 102
I D D T L+S SEANA A + G+ IA+G+SR G + L G+
Sbjct 315 IFCDMDGTLLNSKSQISEANAKALKEALLRGLKVVIATGKSRPGAIRILKTADLTGSDGI 374
Query 103 MKYNGYPGIFLNGSVVYGRNG--------DILSCAEIPLPG-QHLLLEKMKEMGVLNNIL 153
+ + PG+F+ G +VYGR G D C E L +H + ++
Sbjct 375 ISESS-PGVFVQGLLVYGRQGKEVYRGNLDRDVCRETCLYSLEHRI-----------PLI 422
Query 154 GYTPDKVLCIERNQYTDKSYVVYKEPAPEVLTY--EEFASTRFVKLVACGTVESTNQA-R 210
++ D+ L + + D + +Y EP E+++ + A K++ T E + R
Sbjct 423 AFSQDRCLTLFDHPLVDSLHTIYNEPKAEIISSVDQLIAEADIQKVIFMDTTEGVSSVIR 482
Query 211 PLLEKAVGDHLRCVRPLDWNLEFINPSVSKAVGAKVLLEHLGVDASDVLAMGDGENDIQV 270
P +A GD V+ LE + P SK G K+LL HLGV +++A+GDGENDI++
Sbjct 483 PYWSEATGDRANVVQAQSDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEM 542
Query 271 LKLAGVSVAVANACPAAKAAAKYTTVSNNESAFQVVADLV 310
L+LA + VA++N KA A VSN++ VAD +
Sbjct 543 LQLASLGVALSNGAEKTKAVADVIGVSNDQDG---VADAI 579
Lambda K H
0.319 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 118323670014
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40