bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0819_orf1 Length=326 Score E Sequences producing significant alignments: (Bits) Value 3702.AT2G25870.1 124 3e-27 > 3702.AT2G25870.1 Length=584 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 31/280 (11%) Query 47 ILTDFDYTFLDSDHNASEANAAAFGKTAAAGIITAIASGRSRDGTLSCLSET----CKGL 102 I D D T L+S SEANA A + G+ IA+G+SR G + L G+ Sbjct 315 IFCDMDGTLLNSKSQISEANAKALKEALLRGLKVVIATGKSRPGAIRILKTADLTGSDGI 374 Query 103 MKYNGYPGIFLNGSVVYGRNG--------DILSCAEIPLPG-QHLLLEKMKEMGVLNNIL 153 + + PG+F+ G +VYGR G D C E L +H + ++ Sbjct 375 ISESS-PGVFVQGLLVYGRQGKEVYRGNLDRDVCRETCLYSLEHRI-----------PLI 422 Query 154 GYTPDKVLCIERNQYTDKSYVVYKEPAPEVLTY--EEFASTRFVKLVACGTVESTNQA-R 210 ++ D+ L + + D + +Y EP E+++ + A K++ T E + R Sbjct 423 AFSQDRCLTLFDHPLVDSLHTIYNEPKAEIISSVDQLIAEADIQKVIFMDTTEGVSSVIR 482 Query 211 PLLEKAVGDHLRCVRPLDWNLEFINPSVSKAVGAKVLLEHLGVDASDVLAMGDGENDIQV 270 P +A GD V+ LE + P SK G K+LL HLGV +++A+GDGENDI++ Sbjct 483 PYWSEATGDRANVVQAQSDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEM 542 Query 271 LKLAGVSVAVANACPAAKAAAKYTTVSNNESAFQVVADLV 310 L+LA + VA++N KA A VSN++ VAD + Sbjct 543 LQLASLGVALSNGAEKTKAVADVIGVSNDQDG---VADAI 579 Lambda K H 0.319 0.134 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 118323670014 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40