bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0863_orf3
Length=189
Score E
Sequences producing significant alignments: (Bits) Value
5671.LinJ29.1510 76.3 5e-13
> 5671.LinJ29.1510
Length=867
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Query 13 AQW--NLGNSPKEVLAKMRQKVMQEVLGYFKPQVIGRMTKIVIFEPLSDSAMRGVLDLMF 70
AQ+ N+ SPK Q VM EV +F+P+ I R+ I++F L M G++DL+
Sbjct 722 AQYLQNMDTSPKAYEVAQTQ-VMGEVRKFFRPEFINRLDDIILFRSLGLKEMTGIIDLIT 780
Query 71 THLTKELKKRGITLVVSDSAKGFILERAWSHKFGGRRMAKYIEKYVTAKVAPLILSAKL 129
L LK + I + +++ AK ++LE A+ G R + +++EK +T +++ +I+S +L
Sbjct 781 EELNGRLKDQSIRVSLTEEAKNYVLESAFDADMGARPLRRWVEKNITTELSRMIISQEL 839
Lambda K H
0.318 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 41818451300
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40