bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0884_orf3 Length=756 Score E Sequences producing significant alignments: (Bits) Value 7719.ENSCINP00000005901 318 6e-85 > 7719.ENSCINP00000005901 Length=1187 Score = 318 bits (814), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 222/569 (39%), Positives = 290/569 (50%), Gaps = 80/569 (14%) Query 210 AFDCSQCSVNATC-DPLGA-TCQCKPGFRGDGTQCEAFNPCEGETAPCDANATCTADGND 267 A + C NA C + +G+ TC CK GF G+G C + C T CD NA CT Sbjct 19 ALNTDNCDTNANCTNTIGSFTCACKTGFTGNGVNCTDIDECALNTDNCDTNANCTNTIGS 78 Query 268 AKCHCNKGWNADSKAGASGHACVEEDECANNTHECPQHSTCVNTEGSYECNCLPGYQKDQ 327 C C G+ D G +C + DECA NT C ++ C NT GS+ C C G+ D Sbjct 79 FTCTCKTGFTGD------GVSCTDIDECALNTDNCHTNANCTNTVGSFTCTCKTGFSGDG 132 Query 328 DGKCQDIDECA-GEHGCPAHSTCVNTAGSFECKCDAGFSGSATSESPCSNIDEC-QDPDA 385 C DIDECA + C ++ C NT GSF C C GFSG+ T+ C ++DEC + D Sbjct 133 -VSCTDIDECALNTNNCDTNANCTNTIGSFTCTCTTGFSGNGTT---CIDLDECALNTDN 188 Query 386 CSANAICADTEGSFTCSCPEGYSGGGSHDSPCSKIDYCADPTLNTCGAHSTCVNTLTTFK 445 C+ NA C +T GSFTC+C G++G G C+ ID CA T N C ++ C NT+ +F Sbjct 189 CNINANCTNTIGSFTCTCKTGFTGDG---VTCTDIDECALNTDN-CITNANCTNTIGSFT 244 Query 446 CVCDAGYDGAGTHESPCVDIDECSKEKP-------------------------------- 473 C C G+ G G C DIDEC+ Sbjct 245 CTCKTGFTGNGV---TCTDIDECALNTDNCNTNANCTNTIGSFTCTCKTGFTGDGVTCTD 301 Query 474 -------SNDCNRNAVCTNTEGSYTCACKEGFSGEGFGAAGCADVDECA--NSPCDAHAS 524 +++C+ NA CTNT GS+TC CK GF+G+G C D+DECA CD +A+ Sbjct 302 IDECALNTDNCDTNANCTNTIGSFTCTCKTGFTGDG---VTCTDIDECALNTDNCDTNAN 358 Query 525 CANTEGSYVCTCNPGYEPASSDGHACKDVDECAAGTAECHVSAQCVNVDGSYECHCLEGF 584 C NT GS+ CTC G+ + DG +C D+DECA T C +A C N GS+ C C GF Sbjct 359 CTNTIGSFTCTCKTGF---TGDGVSCTDIDECALNTDNCDTNANCTNTIGSFTCTCKTGF 415 Query 585 IGDGKVCSDVDECAAEASPCGANTHCLNTIGSYECECKDGYGHMEGNACSDIDECSEAST 644 G+G C+D+DECA C N +C NTIGS+ C CK G+ +G +C+DIDEC+ + Sbjct 416 TGNGVTCTDIDECALNTDNCDTNANCTNTIGSFTCTCKTGF-TGDGVSCTDIDECALNTD 474 Query 645 EIPENCNCVNTEGSFSLEAKPGYELVDGKCVKIDFCARGACNSLAHCKENPEGTAAI--- 701 N NC NT GSF+ K G+ C ID CA + +CK N T I Sbjct 475 NCDINANCTNTIGSFTCTCKTGFTGDGVSCTDIDECAL----NTDNCKINANCTNTIGSF 530 Query 702 -CTCIAGYSGDGTAQGHCDDIDECLAEND 729 CTC G++G+G C DIDEC D Sbjct 531 TCTCKTGFTGNGVT---CTDIDECALNTD 556 Lambda K H 0.316 0.131 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 358191412700 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40